Maioricimonas rarisocia: Mal4_32020
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Entry
Mal4_32020 CDS
T06940
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mri
Maioricimonas rarisocia
Pathway
mri03030
DNA replication
mri03430
Mismatch repair
mri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mal4_32020 (dnaE)
03430 Mismatch repair
Mal4_32020 (dnaE)
03440 Homologous recombination
Mal4_32020 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mri03032
]
Mal4_32020 (dnaE)
03400 DNA repair and recombination proteins [BR:
mri03400
]
Mal4_32020 (dnaE)
Enzymes [BR:
mri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mal4_32020 (dnaE)
DNA replication proteins [BR:
mri03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mal4_32020 (dnaE)
DNA repair and recombination proteins [BR:
mri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mal4_32020 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HHH_3
DDE_Tnp_IS66_C
Motif
Other DBs
NCBI-ProteinID:
QDU38870
UniProt:
A0A517Z8Q1
LinkDB
All DBs
Position
4219471..4223085
Genome browser
AA seq
1204 aa
AA seq
DB search
MSQPPPFAHLHCHTHYSLLDGANRIPDLVQQVKNLGMNACAITDHGNLYGALEFFETCKA
NDVNPVLGYEAYVAPGHRTDRSASRMKEAAFHLTLLAMNRTGFKNLTKLASKAYLEGFYY
KPRIDKELLAAHSEGIICLSGCASSELSRLLLAEEWDKGQNLVQWYVETFGDRFYMEIQD
GGVEIQQSCAEATIELANRMGLPLVATNDAHYLCDSDAAMHDVLLCVNTKSYRSDTNRMK
IDTDQLFIRSPEQMYEAFSSLPDAVARSQEIADRVDVDLDLTTRHFPVFQPPPGKTDVEY
LREVCEEGLRWRYGENPDPVYQERLDFELGVIERMGYSSYFLIVWDFARFAIAEEIPCTA
RGSACGAIVAYLLGLSDVCPIKYDLLFERFLDPSRSEAPDIDIDFCRDRRELVIQYVKDK
YGSENVAQIGTFGTLKAKAAVRDVARALSIPLKRADEIAKMIPDTLNIKLKDALKESGEL
KEQYDQDPQIKELIDMAMALEGLAKSAGTHAAGVVIADKPLDEYVPLQKLSGKEDILTQW
TDVEKAGLLKMDFLGLRNLSILDKAVKNVEKHRGIKIIPRDLPLDDKKTYALLQRGETKG
IFQLESGGMRDLLTKMKPDKFADIIATSALYRPGPLEGGMVMTYVNVKHGREPVPTVHPI
VDEVLAETYGVMVYQEQVMRILNRLGGIELASSYRCIKAISKKKHSIIAGFHEQFLKGAA
ENNMAKEQAQEIWNLIEKFAGYGFNKSHSTAYGAIAYQTAYLKAHYPHEFMAALLSCGME
SSDRISEHTDDCRRMGIEIIPPDVNTSDVDFSVVVEEVESEDGEGPPEYRRRISYGLGAI
KGVGENAMHAMVAERDENGPFKDIFDLCERVDPKLFNKSVLETLIKAGALDNFGPSRPQH
MLVTDRAVQAAAARHRDKARGQMSLFGDGGSSEPEEGGDDAEPASIPPADDWTHSQKLAY
EKETFGFYLTSHPLTEFADELATMAAHTVADLRDLDDGKEVSVGGMISSIKKAATKKPSR
NGNSRYVNFDLEDASGVVRCIMWPDDYARVGEKVVSDAIVIIKGRIDARGREPNLIVNKL
LTLEEAEKTFTKQVAIKFRRGYHTEMDMRRVNDILARHPGKTPVVLVVETWPEEAPSDDP
ANGNGNGNGTATLAPPAPPKTNKRLRCFLSTQAAVSAKPELKKELTEALGEGSFRFTAEP
GGRD
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgagccagccccctccctttgctcacctgcactgccacacgcactacagcctgctcgac
ggcgccaaccgcattcccgacctcgtgcagcaggtcaagaacctgggaatgaatgcgtgc
gccatcaccgaccacggcaacctgtacggggcgctggagttcttcgagacctgcaaggcg
aacgacgtcaatccggttctgggctacgaggcgtacgtggcaccgggccaccggactgac
cgcagcgccagccggatgaaagaagccgccttccacctgacgctgctggcgatgaaccgg
accgggttcaagaatctcaccaaactggcctccaaggcgtacctcgaagggttctactac
aagcctcgcatcgacaaggaactgctcgcggcccacagcgaggggattatctgcctgtcc
ggctgtgcctccagcgagctctcacggctgctgctggccgaagaatgggacaaaggacag
aacctcgtccagtggtacgtcgagacgttcggcgaccgcttctacatggagattcaggac
ggcggtgtcgagatccagcagtcctgtgccgaagcgacgatcgaactcgccaaccgcatg
gggctgccgctcgttgcaaccaacgacgcgcactacctgtgcgactccgatgcggcgatg
cacgacgtgttgctgtgcgtgaacaccaagtcgtatcgcagcgacacgaaccggatgaag
atcgacaccgatcagctgttcatccggtctcccgaacagatgtacgaggcgttttcctcc
cttcctgacgcggtcgcccgctcgcaggaaatcgccgatcgcgtcgacgtcgacctcgac
ctgacgacgcgtcactttccggtcttccagccgccgcccggcaagaccgacgtcgagtac
ctccgcgaggtctgcgaagaggggctgcggtggcggtacggcgagaaccccgatccggtc
taccaggaacgcctcgatttcgagctgggcgtcatcgagcggatgggctactccagctac
tttctgatcgtctgggacttcgcccgcttcgcgatcgcggaagagatcccctgcacggcc
cgtggctcggcctgtggagccatcgtcgcctacctgctggggctctccgacgtctgtccg
atcaaatacgacctgctcttcgagcgattcctcgatcccagccggtcggaagcgcccgat
atcgatatcgacttctgccgcgaccgtcgcgaactggtcattcagtacgtgaaggacaag
tacggcagcgagaacgtcgcccagatcggtaccttcggcacgctgaaagccaaggcggcc
gtgcgcgacgtggcccgtgcgctctcgattccgctcaagcgcgcggacgagatcgcgaag
atgatcccggacacgctcaacatcaagctgaaggatgcgctgaaggagagtggcgaactc
aaggaacagtacgatcaggatccgcagatcaaggaactgatcgacatggcgatggccctc
gaaggtctcgccaagagcgccggcacccacgcggccggcgtcgtgattgccgacaagccg
ctcgacgagtacgtcccgctgcagaagctttccggcaaggaagacatcctcacgcagtgg
accgatgtcgagaaggccggtctgctcaagatggacttcctgggtctgcggaacctgtcg
attctcgacaaggccgtcaaaaacgtcgagaagcatcgcggcatcaagatcatcccccgc
gatttgccactcgacgacaagaagacttacgccctgctgcagcgcggcgaaacgaagggg
atcttccagctcgaatccggcggaatgcgtgacctgctcacgaagatgaagccggacaag
ttcgccgacatcatcgccacctcggccctgtaccgtcccggccctctcgaagggggcatg
gtgatgacgtacgtgaacgtcaagcacggccgcgaaccggtcccgaccgttcacccgatc
gtcgacgaagtgctcgccgaaacctacggcgtgatggtctaccaggaacaggtgatgcgg
attctgaaccggctcggcggcatcgagctggccagttcctaccgctgcatcaaagccatt
tcgaagaagaagcactcgatcatcgccggcttccacgagcagttcctcaagggagctgcc
gaaaacaacatggccaaggagcaggctcaggagatctggaacctgatcgagaagttcgcc
gggtacggcttcaacaagtcgcactcgacggcctacggagcgatcgcctaccagacggcc
tacctgaaggcgcactacccgcacgagttcatggcggccctgctctcgtgcggcatggaa
agcagcgaccggatcagcgagcacaccgacgactgtcgccgcatgggaatcgagatcatc
cctccggacgtcaacacgtccgatgtcgacttcagcgtcgtcgtcgaggaggtggaatcg
gaagatggcgagggaccgccggaataccgccgccggatctcctacggtctgggcgccatc
aagggcgtcggcgagaacgccatgcacgcaatggtcgccgagcgcgatgagaacggtcct
ttcaaggacatcttcgacctctgcgagcgcgtcgaccccaaactgttcaacaagtcggtt
ctcgaaaccctgatcaaggccggagctctcgacaacttcggtccgagccggccgcagcac
atgctcgtgaccgatcgggccgtgcaggcggccgctgcacgccaccgggacaaggcccgc
gggcagatgtcactgtttggcgatggaggatcgtccgagccggaagagggaggagacgac
gccgaacccgcttcgattccccctgccgacgactggacgcacagccagaagctcgcctac
gagaaagaaaccttcggcttctatctcaccagtcaccccctcaccgagtttgccgacgaa
ctcgccacgatggccgcacataccgtggccgacctgcgggatctggacgacggtaaggaa
gtctccgtcggcggaatgatctcgtcgatcaagaaggctgccaccaaaaagccgtcgcgc
aacggcaacagccgctacgtcaacttcgatctcgaggatgcctccggcgtcgtccgctgc
atcatgtggcccgacgactacgcgcgagtcggcgagaaggtggtgtctgacgcgatcgtg
atcatcaagggacggatcgacgcccgcggacgcgaaccgaacctgatcgtcaacaaactg
ctcaccctcgaagaagccgaaaagaccttcaccaagcaggtcgcaatcaagttccgccgc
ggctaccacaccgaaatggacatgcgacgcgtcaacgacattctcgcccgacacccgggc
aagacgccggtcgtgctcgtcgtcgaaacctggcctgaagaagcaccgtcggacgatccg
gccaacgggaatggcaatggaaacggcactgccacgctggctccgccggctcccccgaag
acaaacaagcggctgcgatgcttcctctcgacgcaggcagccgtctcggccaaaccggaa
ctgaagaaagagctgaccgaagcgctgggtgagggaagcttccggttcacggcggaacct
gggggccgcgactga
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integrated database retrieval system
