KEGG   Maioricimonas rarisocia: Mal4_39880
Entry
Mal4_39880        CDS       T06940                                 
Symbol
ygcB
Name
(GenBank) CRISPR-associated endonuclease/helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
mri  Maioricimonas rarisocia
Brite
KEGG Orthology (KO) [BR:mri00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mri02048]
    Mal4_39880 (ygcB)
Enzymes [BR:mri01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Mal4_39880 (ygcB)
Prokaryotic defense system [BR:mri02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Mal4_39880 (ygcB)
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Cas3_HD Helicase_C ResIII
Other DBs
NCBI-ProteinID: QDU39642
UniProt: A0A517ZAW9
LinkDB
Position
complement(5304808..5307375)
AA seq 855 aa
MSYEQFFRKAMRSSHETEGFSPYPYQGRMAACNQWPTLLNVPTGVGKTAAVVLAWLYRRH
AADTDVRQQTPRRLVYCLPMRTLVEQTQSNVNQWLTNLDLADGDDRVDVHVLMGGEEADD
WDLHPDRDAILIGTQDMLISRALNRGYGMSRYRWPVHFALLNNDCQWVLDETQLMGVGST
TAAQLDGFRQSLSTYGPAHTLWMSATLDTGAVETVDNPKLDGGWTAEALGDDDFAHEDVD
RLIKASKPCGKAATELSPNSAKKGYEAALADEILSAHRPGTLSLVVVNQVMRAQKLTQSL
QKALKKNEDAPEVDLIHSRYRPHERRPQQERALDEDHLPDAGRIIVATQAIEAGVDLSAA
TLFTELAPWSSLVQRFGRCNRRGVCGHDGVPEAQVRWVDIDTVDVKKARPLALPYQVEEL
DQAREIVSSLDDVGPAVLANQHAEQPDSVVHVIRRKDLLDLFDTTPDLSGNDLDVSRYIR
EADDTSVQVYWRDWDISPSTRQFQPPAPNDDDAAVEFPAPDRDELCGVAVGQFRDFAKKL
RKQEKTRHLLWRWEPLERQWNEVEPEQIRPGTVLLLHATAGGYDCDLGWTGDPKHRPVCD
CRKDLHVANEAMDDDDTGSGPIELAVHLRDVADEAESLQKTLQAEFSDDLPWAAVVRAAR
WHDVGKAHPAFQAAMGDCEQVTAKDPDGTKLWAKSGRKGYPGYRIPQGEDAAPQFRKGFR
HELASALAWLARHEGEDCADLVAYLVAAHHGKVRMSIRSMPNESRPPEPSRLFARGIWSG
DRMPLVDADASAGEVAGEVALDLELMKLGDSDDGRPSWLSRTLDLRERFGPFRLAFLETL
VRVADWRGSKGETEK
NT seq 2568 nt   +upstreamnt  +downstreamnt
atgtcctacgaacaattcttccgcaaggcaatgcggtcgtcccacgagaccgaagggttc
agcccctacccgtaccaggggcggatggctgcctgcaaccagtggccgacactgctgaac
gtgcccactggagtcggcaagacggccgcggttgtcctggcttggctataccgacggcat
gcggcagacacagatgtccgccagcagacaccccgccggctggtctactgcctgccgatg
cggacgctcgtcgaacagacacagtcgaatgtcaaccaatggctgacaaatctcgacctg
gccgacggagatgaccgggtcgatgtccatgtgctgatggggggggaggaggcggacgac
tgggatctgcaccccgatcgggatgccatcctgatcgggacacaggacatgctcatctcc
cgggcgctcaaccggggctacggcatgagccgatatcgctggccggttcattttgccctg
ctgaacaacgactgccagtgggtgctcgatgagacgcagctgatgggagtcggcagcaca
accgccgcccagcttgacggattccgtcagagcctgagcacgtacggaccggcgcacaca
ctgtggatgtcggcgacgctcgacaccggggcggttgaaacggtggacaaccccaagctg
gacggcggatggaccgccgaggccctcggtgacgacgactttgctcacgaagacgtcgac
cggctgatcaaggcatccaaaccctgcggcaaggctgcgacagaactttctcccaacagc
gcaaagaaggggtacgaagcggccctggccgatgagatcctctccgcacaccgcccgggt
acgttgtcactggtggtcgtcaatcaggtgatgcgtgcgcaaaaactcacgcagtcactg
cagaaagctctcaaaaagaacgaggatgctcccgaagtcgacctcatccactcgcggtac
cggccccacgagcggcggccgcagcaggagcgggctctcgacgaggatcaccttcccgac
gcggggcggattattgtcgccacgcaggcgattgaagcgggagtcgacctgtcggccgcg
acgctcttcaccgagctggccccctggtcgtcgctggtacagcggttcggacgctgcaac
cgtcgtggcgtgtgtggtcacgacggagttcccgaagcacaggttcgatgggtcgacatc
gacaccgtagacgtcaagaaggcccggccactggctcttccctatcaggtcgaggaactg
gaccaggcacgtgagattgtcagcagcctggacgatgtgggtccggcggttctcgcgaac
cagcacgctgaacagcccgattctgttgtccacgtcatccggcgcaaggatctgctcgac
ctgttcgacaccactccggatctgagcggcaatgacctggacgtgtcgcgttatatccgt
gaggcggatgacaccagcgtgcaggtgtactggcgagactgggatatcagcccgtcaacc
cggcagttccagccacccgctccgaacgatgacgacgcggctgtggaattccctgctccg
gaccgggacgaactgtgtggcgtggcggtcgggcagttccgcgattttgcgaagaagctc
agaaagcaggagaagacgaggcatctgctgtggcgctgggaaccgctcgaacgccagtgg
aacgaggttgagccggaacagattcgcccggggacggtcctgctgctgcatgcgacggcc
ggcggctatgactgcgatctggggtggaccggcgatccgaaacatcgtcccgtctgcgac
tgccgcaaagacctgcacgtggcgaacgaagccatggatgacgacgacaccggcagcggg
ccgatcgaacttgcggtgcacctccgcgatgtggccgacgaagcagagtcgctgcagaag
acgcttcaggcggaattcagtgacgacctgccatgggcagccgtggttcgtgcagccagg
tggcacgatgtaggcaaggcccacccagcctttcaggcggcaatgggggactgtgaacag
gtcacagcgaaagatcccgacggaacgaagctgtgggccaagtcggggcggaaggggtac
cccggctaccggattccgcagggagaggatgccgccccgcaatttcgcaaaggcttccgc
cacgaactcgccagtgccctggcgtggctggcccgtcacgaaggagaggattgcgcggat
ctggttgcgtatctggtcgcggctcatcacggcaaggtgcggatgagcatccgcagtatg
ccgaacgagagccggccgccggaaccgtcccggctgtttgcgcgggggatctggtccggc
gaccggatgccgcttgtcgatgccgacgcttcggcgggagaggtggcaggagaggtcgca
ctggacctcgaactgatgaagctgggcgacagcgacgacggtcggccaagctggctgtcg
cgcacgctggatctgcgggagcgattcggtccgttccggctggcgtttctggagaccctg
gttcgggtggcggactggcgcggcagcaagggggagacggagaaatga

DBGET integrated database retrieval system