KEGG   Methanobacterium aridiramus: FGU46_02070
Entry
FGU46_02070       CDS       T10862                                 
Symbol
fen
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mrid  Methanobacterium aridiramus
Pathway
mrid03030  DNA replication
mrid03410  Base excision repair
mrid03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mrid00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FGU46_02070 (fen)
   03410 Base excision repair
    FGU46_02070 (fen)
   03450 Non-homologous end-joining
    FGU46_02070 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mrid03032]
    FGU46_02070 (fen)
   03400 DNA repair and recombination proteins [BR:mrid03400]
    FGU46_02070 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mrid04147]
    FGU46_02070 (fen)
DNA replication proteins [BR:mrid03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    FGU46_02070 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     FGU46_02070 (fen)
DNA repair and recombination proteins [BR:mrid03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     FGU46_02070 (fen)
Exosome [BR:mrid04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   FGU46_02070 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc EcoRII-C
Other DBs
NCBI-ProteinID: WJI08960
LinkDB
Position
complement(409809..410795)
AA seq 328 aa
MGVKFRDIVSTEHIKFEDLEGKTVALDAANIIYQFLSSIRQRDGTPLMDHNGRVTSHFSG
ILYRTTSLIERGIKPIYVFDGQSSHLKKDTQAKRNEVKVQSERRWKDALEEGRIEDARKF
AVRSSRMSHDVVDGSKKLLTLMGIPYIQAPGEGEAQASYLVEKGDAWCVGSQDYDCLLFG
APRMVKNLTISGGLGKLELIELKKVLEELDITREQLVDLALLVGTDFNPGIKGIGAKKGL
KLIKDHGNIYSVLEDRDVIFEIHPQVLQNLFLQHEVRTDYALEWKNPDREQIVEFLCGEH
DFSEERVLNAVDKIRKLDANQSSLEKWF
NT seq 987 nt   +upstreamnt  +downstreamnt
atgggtgttaagtttcgagacatagtatctaccgaacacataaagttcgaagatttagag
ggaaaaactgtggcactggatgcggctaacatcatataccaatttttatccagtatccgc
cagagagacggcactcctcttatggaccataacggaagagtaacttcccatttcagcggc
attctctaccgcactacctccctgattgagaggggaatcaaaccgatttacgtattcgac
ggacagtccagtcatcttaaaaaggatacccaggccaaacggaacgaggttaaggttcaa
tccgaaaggcgatggaaagatgcattggaggagggtcgtatcgaagatgcccgtaaattc
gcggttagatcgtctagaatgtcccatgatgtagtagatggttcaaaaaaactacttaca
ctcatgggaattccttatatacaggcaccgggagagggagaggctcaggcatcctacctg
gtggagaaaggtgatgcctggtgtgttggatcacaggattatgattgtctgcttttcggt
gcgccgcgtatggtgaagaatttaaccatcagtgggggactgggtaaactggaactgata
gaactaaaaaaggtcctagaagaactggacattacccgcgaacaactggtcgacctggca
ttactggttggaaccgattttaaccctggaataaaaggtataggtgctaaaaaaggttta
aaacttataaaagatcatggaaatatttatagtgtcctggaagaccgggatgttattttt
gaaatacacccccaggttctgcaaaacctgttcctccagcatgaagtaagaactgactat
gcacttgaatggaaaaatccagaccgagaacagatagtggaatttttatgtggtgagcac
gatttttcggaggaaagggtgcttaatgccgtggataagatccgtaaattggatgccaat
cagagcagtttggagaaatggttttaa

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