Methanobacterium aridiramus: FGU46_02625
Help
Entry
FGU46_02625 CDS
T10862
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mrid Methanobacterium aridiramus
Pathway
mrid03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGU46_02625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrid03019
]
FGU46_02625
03009 Ribosome biogenesis [BR:
mrid03009
]
FGU46_02625
Enzymes [BR:
mrid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FGU46_02625
Messenger RNA biogenesis [BR:
mrid03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FGU46_02625
Ribosome biogenesis [BR:
mrid03009
]
Prokaryotic type
rRNA helicases
FGU46_02625
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
WJI09061
LinkDB
All DBs
Position
complement(505664..507247)
Genome browser
AA seq
527 aa
AA seq
DB search
MNSLLFEDMDLSPKIKKAIKDLGFEEATPIQSLVIPPILEGKDVIGQAQTGTGKTASFGI
PVLEMVDPNDASLQAVILCPTRELAIQVAEELKKLSKYKKTNVLPIYGGQPIERQIKALK
KGVQIIIGTPGRVMDHMYRRTLFMGKVKMIILDEADEMLDMGFREDIEFVLGKMPSERQM
LLFSATMSKAILALTKKYQNDPQFLKVAHQELTVPQIEQVYFEVREKNKLDLLSRLIDLH
DLQLSLVFCNTKRRVDKLVNHLQTRGYMAGGLHGDMSQNQRDRVMAKFRKGQIEVLVATD
VAARGIDVDDVEAVFNYDVPNDDEYYVHRIGRTGRAGKTGQAFTFVAGKEIYKLRDIQRY
TKVRIKQLQIPSLQEVEKLKNYRFLENLKHLINNEYLGQEVQMVEKLMEEDYSSLDVAAA
LMKMLLDKRNNSESKPSTDFGDTGAQPGKVRFFVNLGRKQNVKAKDIVKAIHEVSGLSST
SIGRIDVLDKFSFIELPLEHAQEISEALEGTRIKGKRVNLELANKKK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtttattatttgaagacatggatttatctcctaagattaaaaaagctattaaa
gacctgggatttgaagaagcaactcctattcagtctttagtaattcctcccattttggaa
ggaaaagatgtaattggccaggctcaaactggcactggaaaaaccgcttcatttgggata
ccagtattagaaatggtcgaccctaatgatgctagtttgcaagctgtaattctctgtccc
accagagaactggccattcaagtggcagaagaacttaaaaaactttcaaaatacaaaaaa
accaatgttctaccaatttatggcgggcaacccatagaaagacagattaaagcccttaaa
aaaggggtccagattattattgggactccgggtcgtgtgatggatcatatgtaccggcgc
acccttttcatgggaaaggttaagatgataatactggacgaggcggatgaaatgctggat
atgggtttccgggaggacattgaattcgtcctgggtaaaatgccgtctgaaagacagatg
cttcttttttctgctaccatgtccaaggcaatactggctttaactaagaagtatcagaat
gacccccaatttttgaaagttgcccatcaggaacttactgtgccccaaatagagcaggtc
tattttgaggtgcgggagaagaataaactggatctactgtcccgacttatagacttacac
gaccttcaactgtccctggtattttgcaatactaaaagaagagttgataaactggtaaat
catctacagaccagagggtacatggctggaggtttacatggtgacatgagtcagaatcaa
cgtgacagggtaatggcaaaattccgaaagggacagatagaggttctggtggctactgat
gtagcggcccgaggaattgatgtggatgatgtggaagcggttttcaactacgatgttccc
aatgatgacgaatattatgtgcatcgtattggtagaactggtcgggctggcaaaactggt
caagccttcaccttcgtggctggaaaggagatttacaagttaagggatatccaacgatac
actaaggtccgaattaagcagttacaaattccatcactacaagaggtggagaaacttaag
aattaccggttcctggagaatttaaaacatctaatcaacaatgaatatctgggccaggaa
gttcagatggttgaaaagctgatggaagaggattacagttctctagacgtggctgcagct
cttatgaaaatgttactggacaaaaggaacaattcagaatctaaaccttccactgatttt
ggtgatacgggagctcaaccaggtaaagtcagatttttcgttaacttgggtcgcaagcag
aatgtgaaggcaaaagatatagtaaaagccattcatgaagtatccggattatcatcaacc
agtataggccgtattgatgttctggacaagttttccttcatagaacttccactggaacat
gcccaggaaatatccgaagcactggaagggaccagaattaagggtaaaagggtgaacctg
gagctggctaataagaagaaatga
DBGET
integrated database retrieval system
