Methanobacterium aridiramus: FGU46_04225
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Entry
FGU46_04225 CDS
T10862
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mrid Methanobacterium aridiramus
Pathway
mrid03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mrid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FGU46_04225 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrid03400
]
FGU46_04225 (xth)
Enzymes [BR:
mrid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
FGU46_04225 (xth)
DNA repair and recombination proteins [BR:
mrid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FGU46_04225 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
WJI09357
LinkDB
All DBs
Position
complement(795832..796611)
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AA seq
259 aa
AA seq
DB search
MSTIRILSWNVNGIRAVHRKGFKKWALEDKPDVLCLQETKATVEQFPKDIRNMDDYQLYT
SEAERKGYSGVATYTRIKPEKVEHGLGIPKFDQEGRTLITDFGDFVLFNIYFPNGKMSGE
RLRYKLDFYDSFLDYADQLKDEGRNIVICGDVNTAHKEIDLARPKENSKISGFLPVEREW
IDRFLSHGYVDTFREFNKEPEQYTWWSYRTRARERNVGWRLDYFFVNEEFMGQVENSYIL
TDVMGSDHCPVGLDIRVEE
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatcaggattttatcatggaatgttaacggtatcagggctgttcaccgtaaa
ggctttaaaaaatgggctttggaggataaacccgacgttttatgcctacaggagactaaa
gccactgtagaacaattccccaaggatatccgaaatatggatgactaccaactttatact
tccgaagcagagaggaagggatacagtggggtagccacctacacccgtattaaaccggaa
aaggtggagcatggattgggaatacccaaattcgaccaggagggaagaaccctcatcact
gacttcggagacttcgtgcttttcaatatctatttccccaacggtaagatgtccggggaa
cgcttgcggtataaactggacttctacgactccttcttagactacgcagaccagttgaag
gatgaggggcgtaacatcgtgatatgtggtgatgtgaacactgcccataaagagatcgac
ctggcccgccccaaagagaactcgaagatttcaggattcctgcctgtggaaagggagtgg
attgaccgatttttaagtcacggttatgtggacaccttccgggagtttaataaagaacca
gaacagtacacctggtggagttaccgtacccgggcccgggaacgtaacgtgggctggcgt
ctggactacttcttcgttaatgaagagtttatgggtcaagtggagaattcgtacatctta
actgatgttatgggttctgatcactgtccggtggggttggatattcgggttgaagaataa
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