Methanobacterium aridiramus: FGU46_05390
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Entry
FGU46_05390 CDS
T10862
Name
(GenBank) replication protein A
KO
K07466
replication factor A1
Organism
mrid Methanobacterium aridiramus
Pathway
mrid03030
DNA replication
mrid03420
Nucleotide excision repair
mrid03430
Mismatch repair
mrid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FGU46_05390
03420 Nucleotide excision repair
FGU46_05390
03430 Mismatch repair
FGU46_05390
03440 Homologous recombination
FGU46_05390
03460 Fanconi anemia pathway
FGU46_05390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mrid03000
]
FGU46_05390
03032 DNA replication proteins [BR:
mrid03032
]
FGU46_05390
03400 DNA repair and recombination proteins [BR:
mrid03400
]
FGU46_05390
Transcription factors [BR:
mrid03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
FGU46_05390
DNA replication proteins [BR:
mrid03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
FGU46_05390
DNA repair and recombination proteins [BR:
mrid03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
FGU46_05390
MMR (mismatch excision repair)
FGU46_05390
DSBR (double strand breaks repair)
HR (homologous recombination)
FGU46_05390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
Rep_fac-A_C
OB_Ssb-like
HIN
HROB
OB_MEIOB_N
Zn_ribbon_6
DUF7129
DUF7576
DZR_2
Desulfoferrod_N
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
WJI09565
LinkDB
All DBs
Position
complement(1037130..1039511)
Genome browser
AA seq
793 aa
AA seq
DB search
MREISEEIRQEYEKIKDKISYEDFLKKMEIRAQDYEGVSFMSELDLARVIVGEYIEEKNE
PLIQESKDHKISELEAGQHNLTIVGRVMKMSNIKKFTSRKGKEGRLANIILADDTGSMRM
VFWTENIKLLTKNDIREGDVIKLKGVEIKQGYREDEAHLNARSELKKLPSEEFTYLPSPI
TEITRLCDVQGDMEVNVIARIIRIPRIRTFDRNGSEGKVASLELQDESGKMTFTLWNRDT
DLINTLDLHEGDAVKIMGAQSRVRNGEVSLNHSWIGRVEKGEFDVPEYSENVLKIGDARE
MRDVTIVGVASKVYDEITFERDDGSTGRVKSLELEDDTGAIRVTLWNEDTALEIKKGDII
KIIGGNIEFDDYSTAGYRINTNWNSKILINPPIDAKLKEMLHECGKYLKPFKIGELNQIE
DEGDEVDVVGRVVNLYEPNEFQRDDGSKGVVRSAELADETGVVRVSLWEDKAEGHLNEGD
AVKIENARTRLGNYNVELSVGKTSRILKPSPEEMEKLPSVKEVADMLYQDKKITELTEGD
REARILGRILSLYEPREFTREDGSRGMVRSVEIADDTGVIRASLWDDQANQQFSEGDAVR
IANPRVTLRNDVVEISAGRTTQVTRVKDEESDLPALKDIQEKIYPSKKIDEIEEDLRNIR
VSGEIMEAFGNKILFEMCPTCNKRVIWEEDTYVCEVCGEEVENPEYLMIISILLEDDTGT
IRTTFFRQAAEDLLGISTKEAEEIIDKTGDEGSLEEKVVELVGRQIKIIADAGFDEYNEE
VRLNAKKVLEIKI
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaattagcgaagaaataaggcaagaatatgagaaaatcaaggacaaaatctca
tatgaagattttttaaagaaaatggagataagagctcaggattatgagggagtaagcttt
atgagcgagctagaccttgcccgggtaattgtaggagaatatattgaagaaaaaaatgag
cccctaattcaggagtctaaagatcataaaatatcagaactagaggccggacaacataac
ctaaccattgtcggtagagttatgaaaatgtccaatatcaaaaaattcacgagtagaaaa
ggtaaagaaggcagattagccaacatcatccttgctgatgacacagggagtatgaggatg
gttttctggacagagaacattaagctattaactaagaatgacattcgggaaggggatgtg
attaagctaaaaggggtggaaataaagcaaggatatcgggaagatgaagcccacttgaac
gccagatcagaactgaaaaagctcccttccgaagaattcacttacttaccttcccctata
actgaaataaccagattatgtgacgttcagggcgatatggaagtaaatgtaatcgcccgg
attataagaatcccccgaattagaacttttgaccgtaatggatccgaaggaaaagtagct
tccctggaacttcaagacgaaagcgggaaaatgaccttcaccctatggaaccgggacacc
gaccttattaacactctggatcttcatgaaggagacgcagtgaaaataatgggggcgcaa
agccgagttagaaatggagaagtttcattgaaccattcctggataggtcgtgttgaaaaa
ggagagtttgatgtacccgaatatagtgaaaacgtgctcaaaataggggatgcccgtgaa
atgagagacgtgactattgtaggagtggccagcaaggtttacgacgaaattaccttcgag
agggatgacgggagtaccggtcgagtgaaatccctggaactggaggatgacactggggcc
atcagagttacactttggaatgaagataccgccctagaaattaaaaaaggagatattatc
aaaatcatcggaggtaacatcgaatttgatgattattccactgctggatatcgcataaac
accaactggaatagtaaaatactaataaatccaccaatagatgctaaacttaaagaaatg
ctccatgaatgcggtaaatacctcaaaccatttaaaattggggaattaaaccagatagag
gatgaaggcgacgaagtggatgtggtagggcgagtggtgaacttgtacgaacccaacgaa
ttccagagggatgatggcagcaagggagtggtccgcagcgcagaactggctgatgaaacc
ggtgtggtgcgtgtgtcattatgggaagacaaagcagagggccacttgaatgaaggagat
gctgtgaagattgaaaatgccagaacccgcctgggaaactacaacgtggaacttagtgtt
ggtaaaacttctcgaatacttaaacccagcccagaagagatggaaaagcttccttctgtt
aaagaagttgcagacatgctctaccaggataaaaagattaccgaattgaccgaaggagat
cgtgaagcacgtatattgggtagaattctaagcctttatgagccacgggagttcaccaga
gaagacggtagcagaggcatggtaagatccgtggaaatagccgatgacaccggagtgata
agggcttccctgtgggatgatcaagccaatcaacaattctccgaaggagatgcagtgcga
atagcaaatccacgtgttacccttagaaacgacgtagtagagataagcgccggcaggacg
acacaggtaacccgtgtaaaagatgaggaatctgacctccccgctttaaaagatatacag
gagaaaatttatccttccaaaaaaattgatgaaattgaagaggaccttcgaaatattaga
gtaagtggggagatcatggaggcctttggtaacaaaatcctatttgagatgtgtcccact
tgtaacaaacgagttatttgggaagaagatacatacgtatgtgaagtatgtggcgaggaa
gttgagaatccagagtacctgatgataatttccatcttactggaggatgataccggcacc
atacgcaccacgttcttccgccaggcagctgaggatctgttaggtataagcaccaaagaa
gctgaggagataattgataaaacaggtgatgaaggttctctggaagaaaaagtagtagaa
ttagtgggaagacaaattaaaattattgcagatgctggtttcgacgaatacaatgaagaa
gtgcgtctgaatgccaagaaagttcttgaaataaaaatatga
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