Methanobacterium aridiramus: FGU46_08020
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Entry
FGU46_08020 CDS
T10862
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mrid Methanobacterium aridiramus
Brite
KEGG Orthology (KO) [BR:
mrid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mrid03016
]
FGU46_08020 (endA)
Enzymes [BR:
mrid01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
FGU46_08020 (endA)
Transfer RNA biogenesis [BR:
mrid03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
FGU46_08020 (endA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
BpuSI_TRD
Motif
Other DBs
NCBI-ProteinID:
WJI10038
LinkDB
All DBs
Position
complement(1503463..1503966)
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AA seq
167 aa
AA seq
DB search
MNGKLQGDMVTVASPRAIKLHENSHFGQLIQEELQLPLIEALFLAEKDKLTLSTEGRELS
RDEFTNVVRDKGLFTKYLVFKDLRNRGYIVKTGFKYGSEFRLYERGRSPGNGHSDFLVKV
LTEDQQITINDFSSYVRVAHGVNKKLMLAVVDDEQDITYYNVEWTRP
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaaaactacaaggggatatggtaacggtagccagtccgagagccatcaaacta
catgaaaacagccatttcggacagttgatccaggaagaattacaattaccacttatagaa
gcactgtttctggcagaaaaggataagttaactttgtctactgagggcagagaactatcc
cgggatgagttcaccaatgtggtgcgggataaagggcttttcaccaagtacctggttttc
aaggacctcagaaaccggggttacattgtaaaaaccggttttaagtacggatcagagttt
agactctatgaaagaggaagatctccagggaatggtcactctgacttcctggtaaaggtc
ctgaccgaggatcagcagataaccatcaacgatttctccagttacgtccgggtagcccat
ggagttaacaagaagctcatgctggcagtggtggatgatgaacaggacatcacctactac
aacgtggaatggacccggccctag
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