Macrobrachium rosenbergii (giant freshwater prawn): 136825031
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Entry
136825031 CDS
T10429
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136825031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrj03041
]
136825031
Spliceosome [BR:
mrj03041
]
Complex B
Other components
Prp19-related factors
136825031
Complex C
136825031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
zf-CCCH_2
RRM_YTH1
zf-CCCH
RRM_occluded
zf-CCCH_4
Nup35_RRM_2
zf-CCCH_10
zf-CCCH_12
RRM_3
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
136825031
NCBI-ProteinID:
XP_066937165
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All DBs
Position
36:26907165..26928826
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AA seq
487 aa
AA seq
DB search
MAMSKSTNTYNRQNWEDSDFPILCQTCLGDNPYVRMMRDRYGKECKICTRPFTVFRWCPG
ARMRFKKTEVCQTCAKLKNVCQTCLLDLEYGLPTQVRDSALSLTDDMPKSEVNKEFYIQN
MERQMAATSDGSTPGGVLGKTKTHSEMLLRLARTTPYYKRNRPHICSFWVKGECKRGEEC
PYRHEKPTDPDDPLADQNIKDRYYGVNDPVADKLLKRAAAMPRLEPPEDKSITTLYVGNL
GDRIGEKELRDHFYQYGELRSVNVVAKQQYAFVQFTTRAASEVAAERTFNKLIIQGRRLN
IKWGRSQARQGALGGMEGLEGEDVAPQPLEPVPGLPALPPPPEELQNNFFNLPSAAASIP
LPPGQGPPTSGAPTIRPPRPPGQAPPRPPVPPPGGIPGGPPPLGPLGPRPPGVPPAPPGH
LPPLQPPPFFPPHLRAPLRPPPGVRPPAFFPQPPPIPGVGPPPPLTHGIIHYPSQDPTQM
GANPDKK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggctatgtccaagagcaccaacacgtataacaggcaaaattgggaagattccgacttc
ccaatattgtgtcagacatgtttgggagacaatccatatgtgcggatgatgcgagatcgc
tatggtaaagaatgtaagatctgtacaaggcctttcacagtcttccgatggtgtcctggg
gcaaggatgaggttcaaaaagacagaggtctgccagacttgtgcaaagcttaagaacgtg
tgccaaacttgtttgctggatctggaatatggccttccaacacaggtgagggactctgct
ttaagcctaacagatgacatgcccaagagtgaagtcaataaggaattttacattcaaaat
atggaacgccagatggcagcaacatctgatggaagcacacctggaggagttttgggtaaa
acaaaaacacattctgagatgttgttgcgtcttgcccgcacaacaccatactacaaacgc
aatagaccacacatctgttctttttgggttaaaggagaatgtaaaagaggagaggagtgt
ccttatcgtcacgaaaaaccaacagacccggatgacccacttgctgatcaaaatatcaaa
gaccgttattatggtgttaatgaccctgttgcagacaaactcctaaagagagcagcagca
atgccacggttggaaccaccagaggataagtcaattacaactctgtacgtaggtaacctt
ggtgacagaattggagaaaaggaactacgtgatcatttctatcagtacggggagttacga
agtgttaacgtagtggcaaaacagcaatatgcttttgttcagtttaccacaagagctgca
tcagaggtagctgctgaacgtacttttaataaacttatcatacagggtcgccgtttgaac
ataaagtggggtcgttcacaagccagacagggagcattaggtggcatggaaggccttgaa
ggagaagatgttgcacctcagccattagaaccagtaccaggtctcccagcacttccccct
cctcctgaagaactgcagaataacttctttaacctaccctctgcagcagccagtatacct
ttgcctcctggtcaaggtcctccaacgtcaggggcaccaactatacgaccaccaaggcca
ccaggccaagcaccaccaagaccaccagttccaccacctggaggcattccaggtggacct
ccaccactaggaccattgggtcctcggcctcctggtgtgccaccagctcctcctggccat
ttaccgcctctacagccacctccattttttcctcctcatttgcgggcacctcttcgtcca
cctcctggtgttcgtcccccggcattcttccctcagccaccacctattcccggagtcggt
cctccccctcctcttactcatggtattattcattatccatcacaggatcctactcagatg
ggtgcaaatccagataagaaatag
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