Macrobrachium rosenbergii (giant freshwater prawn): 136826604
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Entry
136826604 CDS
T10429
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
136826604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mrj03009
]
136826604
Ribosome biogenesis [BR:
mrj03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
136826604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Utp12
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_Aladin
NBCH_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_HPS5
WD40_like
Beta-prop_WDR35_TULP_N
Beta-prop_IP5PC_F
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
136826604
NCBI-ProteinID:
XP_066939942
LinkDB
All DBs
Position
41:complement(8098619..8206416)
Genome browser
AA seq
965 aa
AA seq
DB search
MGLTTQYLRYVPASVFGVIGTARCVRFVTRFSQQGKYIAVPACELVLIWDIKRGAKALTL
NADVHGEVTVVEPRPPLPGSLDNTHIAVGYSDGSVTIFDLTIGQPLKFAGHHSPISSLTW
DPQGMRIASGSDDGEIVVWDVVSERGVVRLKGHKGRITRLRFLQHRSVVVSSCMDSFIKF
WDVETHHCFRTLTGHRAEVRDFVLLKNDTRLVAGSADAELRVWSLRFTDLDKTLDDAVGK
IKIEQDDGSYEPPDKLRHLGTEGSVAMLTVDEETGTKDDASILEIVKMGSILRSRGDRVC
GLHTDGHVVVCHGTGAFVDMFVVLTDEETEAKIAKRLKKQRKRAREAGEEFQEDGTPKLV
DEIKKLPQIKACNKLLGVHAFSDKMGIMKLVTLHVDNSLALFQKSVDTKDDVNEQADSKG
KVDPTVLLDRPGHRTEVRTVAFSSLSDQIISASGDCLKVWHRSDVQAVATIACDYALSLI
IAPGDRHAVIGTRSGHLQLFDIVSSAMLEDILAHEPDETETDTGVWSVALTHDGRGFVSG
GSDKMVKFWKFELVRDEVEGRGKRLSFMQDDRALKVADQVMCVRCSSDGKFIAVATLDLK
ETLYFMDTLKLCHELFGKSLPATCMDFSTDGTLLVTGSKDARLRLYGTDYGDQRRLFKNA
HQGGVTDCKFISKTHMFFSCGHDGTVKQWDADNFQRIITLEGHTGIIRCLAICPKGAWVV
TGGQDHSLRLWQRTNEPLILEDEREEERRREEEEKGGNLATQRPLVVGENSSQAVRPSTT
THHTERAVDMIIEALIIYREQLEGGPSVIPHQLMMHVYHTSDPLKFVLEVLRKVKSSELE
EAIIMLPLDRILELLVVLKSLLERSWEIELVGRILVLACRINLPQLIASAKAAPIIHALA
RILPMKLNNLKDMVGFNLAGLRHLSNRMEQRSEDQMFAEAVTKVKSKLQKRKKKERAVKR
VLMTI
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgactactcagtatctacgatatgtgcctgcatctgtgtttggagttattggt
actgcaagatgtgttcgatttgtgacccggtttagtcaacagggaaagtatattgcagtt
cctgcttgtgaattagttttgatctgggatatcaaaagaggagctaaggcccttaccttg
aatgctgatgtccacggggaagtaactgttgttgagccacgccctcctcttcctggttct
ttggataacactcacattgctgttggatactcggatggaagtgtcaccatttttgactta
accattggacaacctttgaaatttgcaggtcatcattctccaatatcatctttgacgtgg
gacccccaaggaatgagaattgcttcaggaagtgatgatggtgaaattgtggtttgggat
gtggtgtctgagagaggagtagttcgtttgaaaggccacaaaggtagaattacacgtctc
cgctttctccaacaccgaagtgttgttgtatcatcatgtatggattcattcatcaagttt
tgggatgtagaaacacatcattgcttcagaactctaactggacacagagctgaggtgaga
gattttgttcttctgaaaaacgatacaaggcttgtggcagggagtgcagatgcagaatta
cgtgtttggtctttacgtttcacagatcttgataagaccttagatgatgcagttggaaaa
attaagatagaacaagatgatggatcttatgagccaccagacaagttacgtcatcttggt
acagaagggagtgttgctatgttaacagttgatgaggaaactggtacaaaggatgatgct
agtatattggaaattgtcaaaatggggagtattcttcgttctcgaggagacagagtttgt
ggtttgcacactgatggccatgtggtagtttgtcatggaacaggagcttttgttgatatg
tttgttgtcctaacagatgaagaaacagaagctaaaattgctaagcggttaaaaaagcaa
cgtaagagagcaagagaagctggggaagagtttcaagaagatggcacgccaaagttagtg
gatgaaattaagaaattaccccaaattaaagcttgtaataaattactaggagttcatgca
ttctctgacaagatgggcatcatgaaattagttactcttcatgttgataatagtttggct
cttttccaaaaaagtgtggacaccaaggatgatgtaaatgaacaggcagattctaaagga
aaagtagacccaacagtactattggaccgcccaggtcacagaacagaagtgagaacggtc
gcattcagttctttgagtgaccagattattagtgcaagtggtgattgtcttaaggtttgg
cacaggtcagacgtacaagctgtagcaaccattgcatgtgattatgctctttcccttatt
attgcccctggggaccgtcatgctgttataggaacgcgatctggtcatttacagcttttt
gacattgtatcgtcagccatgctagaagatattttggctcatgaaccagatgaaactgag
acagatactggagtgtggtcagttgctctgactcatgatggacgaggatttgtttctgga
ggcagcgataaaatggtaaagttttggaaatttgaacttgtacgagatgaagtggaaggc
cgtgggaaaagattaagtttcatgcaagatgatagagctcttaaagtagcagatcaagtc
atgtgtgttcgctgttccagtgatggaaaatttatagcagttgcgactttagaccttaaa
gaaaccctctattttatggatactctcaagctctgccatgaactgtttgggaaatccctt
cctgcaacgtgtatggatttttcaacagatggtactttgcttgtgacagggagcaaggat
gctagacttcgtttgtatggaacagattatggtgatcaaagaaggttatttaaaaatgcc
catcaaggtggtgttactgactgcaagttcatttccaagacacacatgtttttttcttgt
ggtcatgatggcactgtgaaacaatgggatgcagacaactttcagaggattataactctt
gaagggcacactggaatcattagatgtttggccatatgcccaaaaggtgcttgggttgta
actggtggacaagatcattctttacggttatggcagcgtacaaatgaaccattgatcctt
gaagacgaaagagaagaagagcggagaagagaggaagaagagaaagggggaaatttagca
actcagagaccattagtagtaggagaaaactcctctcaggcagttcggccctctacaaca
actcatcatactgaaagagctgtggatatgatcatagaagcattgattatctaccgtgag
cagctggaaggaggaccatctgtcataccacatcagttaatgatgcatgtatatcacact
tcagatcccctgaagtttgttttggaagtactaaggaaagtaaagtcaagtgaactggaa
gaagcaatcatcatgttgcccctagatcgtattttggaactcttggttgtgctgaagagt
ctcttagaacgcagttgggaaattgaacttgttggaaggattttggttttggcttgcagg
ataaacttgccccaacttatagcttctgctaaagcagcacccattattcatgctttggca
agaatcttacctatgaaactaaataatttgaaggacatggttggctttaatcttgctgga
ttacgccatctctcaaatagaatggagcaaaggtcagaagatcaaatgtttgctgaagca
gtaacaaaggtaaaatcgaaattacagaaaaggaagaaaaaagagagagctgtaaaaaga
gtacttatgacaatataa
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