Macrobrachium rosenbergii (giant freshwater prawn): 136826621
Help
Entry
136826621 CDS
T10429
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj04120
Ubiquitin mediated proteolysis
mrj04137
Mitophagy - animal
mrj04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136826621
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
136826621
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
136826621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mrj04121
]
136826621
Enzymes [BR:
mrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136826621
Ubiquitin system [BR:
mrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
136826621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
136826621
NCBI-ProteinID:
XP_066940012
LinkDB
All DBs
Position
41:9351115..9401283
Genome browser
AA seq
276 aa
AA seq
DB search
MSAYANKSGRGIPSQSPPSGISPGGNTDLANLFECPVCFDFVLPPILQCQSGHLVCANCR
PKLTCCPTCRGPLGNIRNLAMEKVASTVMFPCKYSSSGCSVTLLHTDKTEHEETCEFRPY
LCPCPGASCKWQGSLEQVMPHLMSVHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFG
HHFMLVLEKQEKFDGHQQFFAIVQLIGSRKQAENFAYRLELNGPRRRFTWEATPRSIHEG
VQSAIMNSDCMVFDTSMAQLFADNGNLGINVTISMC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcctatgcaaataagagtggcaggggaattccctcacagtctccaccttcaggt
atttctcctggtggtaatacagatttagcaaatctcttcgaatgtcctgtttgctttgac
tttgtgcttccaccaattcttcagtgccagagtggtcatttagtttgtgcaaattgcagg
ccaaagcttacatgctgtccaacatgcagaggaccactaggcaacatcagaaatttagca
atggagaaggttgcatccacagttatgttcccatgcaaatattcctcttcaggttgttct
gtaactctccttcacacagacaaaacagaacatgaggagacttgtgagttccgaccatat
ttatgcccctgtccaggagcctcttgtaaatggcaaggctctttagaacaagtaatgccc
catctgatgagtgtccataaaagtattaccacacttcaaggtgaagacatcgtttttttg
gcaacagacataaacttaccaggtgcagtagattgggttatgatgcagagctgttttggt
catcattttatgttagtactcgagaagcaagaaaaatttgatggtcatcagcagtttttt
gcaattgttcaacttataggatcaagaaaacaagcagaaaattttgcatatagattggag
cttaatggtccacgaaggagatttacgtgggaagctactccacgatccatacatgagggt
gttcagtcagcgataatgaattctgattgtatggtatttgatacatcgatggcccagttg
tttgcagataatggaaacttgggcattaatgtaacaatatccatgtgctaa
DBGET
integrated database retrieval system
