Macrobrachium rosenbergii (giant freshwater prawn): 136827738
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Entry
136827738 CDS
T10429
Symbol
Skp2
Name
(RefSeq) LOW QUALITY PROTEIN: S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj04068
FoxO signaling pathway
mrj04120
Ubiquitin mediated proteolysis
mrj04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136827738 (Skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
136827738 (Skp2)
04150 mTOR signaling pathway
136827738 (Skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mrj04121
]
136827738 (Skp2)
Ubiquitin system [BR:
mrj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
136827738 (Skp2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At1g61320_AtMIF1
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
136827738
NCBI-ProteinID:
XP_066941303
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All DBs
Position
3:90949225..90978085
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AA seq
444 aa
AA seq
DB search
MDGKREAGKRTDDKENVKDGKCTRWSLNVGDVDSDPPLLADMGLSILQDEETTGAPTPTP
PATENCLSNPPPSPKVLQPCNQNIPSTGPFFNEDSMNEEFMVYKRRRLDTIAGDDKFNRM
TDEVILAVFRWLPKFMLARCAQVCRRWKRLSFDESLWRRLDLGGKSLKPGVVGRVILRGA
SILRLAKAEISSPIFSPQLHYLPSLPPVRSRLQYLDLSMAAIEIHALEELLSVCFELKKL
SLEHCTVSKIICXHISNNVKLETLNLAMVYGLSHSCLTPILTKCRRMQSLNLAWTGLSTE
DLRVICRRFPSSLERLNISGCRSTLTDSHVKLLADQAPGLVELDVSDGTQLTAAAVTTII
SQLRSVEYLAFSRCYTIQPDAYIELKMIPSLLYLDIYGILNESAIATLRQSLSRIHVNKY
LFSSVARPTVGIRRTSIWGLRVRD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggatggcaagagagaggctgggaaacgtactgacgacaaagagaatgtcaaagatggc
aagtgcactaggtggagcctcaacgtaggggacgttgattcggatccccccctcttggca
gacatgggactctcaatccttcaggatgaggagaccacaggagcccctacgccaactcct
cccgcaactgaaaactgtttgagtaaccctcccccatccccaaaggttctccagccttgc
aatcaaaacatccctagtactgggccattctttaatgaggattctatgaatgaggaattc
atggtatacaagaggaggaggctggataccatagctggtgatgacaaattcaataggatg
actgatgaagtaattcttgctgtgtttcgttggttacctaagtttatgttggccagatgt
gcacaggtttgcagaagatggaaaagactttcctttgacgagagcctgtggaggcgactg
gatcttggtggaaagtccttaaagcctggtgtggttggacgtgttattctgaggggtgca
agcattcttcgactggcaaaagcagagattagtagtcctatattttctccacagttacat
tatctgccaagccttcctccagttcgtagtagattgcagtacttggacctaagcatggca
gctattgagattcatgctttggaagaattgctgagcgtttgttttgagctcaagaagctt
agtttggaacactgcacagtgtcaaagataatttgtntccacatttccaataatgtgaag
cttgaaacattgaatttggctatggtatacggcctcagtcattcttgtttaactcctatt
ctaacaaagtgcagaaggatgcagtcattaaatttagcctggactgggctatcaacagaa
gatcttcgtgttatatgccgtcgatttccttcgtctttggaacgcttgaatatatctggt
tgtcgtagtaccctaacagattctcatgtgaagttattagcggatcaggctccaggactt
gtggaacttgatgtgagtgatggaacacaactcactgcagctgcagtcacgaccattatt
agtcagctacgcagtgttgaatacttagccttctcacgctgctatacaatacagccagat
gcatatattgaactgaagatgattccaagccttttgtacctggatatttatggaatactc
aacgagagcgccatagcaactctaagacaaagtctgtcacggatccacgtaaacaagtat
ttattttcatctgttgcgcggcccaccgttggaattcgccgaacttcgatatggggactt
agggtgcgagattag
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