Macrobrachium rosenbergii (giant freshwater prawn): 136828882
Help
Entry
136828882 CDS
T10429
Symbol
Slh
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mrj04131
]
136828882 (Slh)
Membrane trafficking [BR:
mrj04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
136828882 (Slh)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
136828882 (Slh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Prominin
Motif
Other DBs
NCBI-GeneID:
136828882
NCBI-ProteinID:
XP_066943279
LinkDB
All DBs
Position
43:50156552..50186475
Genome browser
AA seq
632 aa
AA seq
DB search
MAVSLREKQIASLRRMINLNSAVGASNVGSETTFSVLIYDKHGQDIISPLLSVKDLREMG
VTLHMLLHSERGEVPDVPAIYFCQPTEENLTRIGQDFAEGLYSSYFLNFISPISRQKMED
LALAALQAGCQASIKKVYDQYVNFICLEDDMFTLKHQGSETLSYYAINRGDVKDSDIDLI
MDSIVDSLFSVFVNLGQVPIIRCQRGNAAESVGERLDKKLRENLRDTRNSFFTGFSTDSF
AAGQLSFQRPLLVLVDRGVDLATPLHHTWTYQALAHDVLNLSLNRVSITENDDTHATKRT
KTKEYDLNNSDLFWSTHKGSAFPDVAAAVEKELEDYKTAETHVKSLKNDIPDEDAIDLLS
DNTAKLTSAITSLPELLKKKANIDKHMSIAMALLNSIKSRKLDVYFEMEEKIMGRTTLEK
PLMEIIKDPECGNAKDKLRVFLILYLCSSNMTEPEFNEYLTALTEAGADTRAIAYLKRWK
SLMKITAGAGMSEYTGGVAKTVSMFSKLMNQGSALVVEGVNFVLKENKLPITRIVDHLME
LKNSEEEKEYRYFDPKLLRPSDNTAASRTRTPFQDAVVFVVGGGNYMEYSNIASYAKKKA
GAANKRVIYGCTDVINSEQFLSQLTRLGVEIS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcagcttaagggagaaacagatcgcatcactgcgacgtatgatcaacctgaat
agtgctgtaggggcttctaatgttggcagtgaaaccacattctctgttctcatctatgac
aagcatggtcaggacattatttctcctcttttatccgttaaggatctaagagaaatgggt
gtcactttgcacatgttgctgcacagtgaacgaggggaggtgccagatgtcccagcaatt
tacttttgtcagccaactgaagaaaatttgactcgcattggtcaggattttgctgaggga
ctctattcttcatatttcctcaatttcatctctccaataagtcgtcagaaaatggaggac
ttagctcttgcggccttgcaagcaggctgccaggctagtattaaaaaggtttatgatcag
tatgtaaatttcatctgtttggaagatgacatgttcacattaaaacatcaaggatcagag
acactctcatattatgcaataaatcgtggtgatgtgaaggattcagacattgatctcatc
atggactccattgtagatagcctcttctctgttttcgtgaatttaggtcaggttccaatt
atccgttgtcaaagagggaatgcagccgaaagtgttggtgaaagattagacaagaaatta
agagagaacttgcgtgatacaagaaattcatttttcactggtttcagtacagattcattt
gctgctggacaactcagttttcagcgcccattgttagtgttagtggacagaggtgtagat
ttagcgactcctttacatcatacatggacgtaccaagcacttgcacatgatgttcttaat
ctgagcttgaacagggtgtctataaccgagaatgatgacacacatgctaccaaaagaaca
aagacaaaggagtatgaccttaataactctgacttgttctggagcactcataaaggtagt
gcatttcctgatgttgcagcagctgtagaaaaggaattggaagactacaagacagctgag
acacatgtgaagagtttaaaaaatgatataccggatgaagatgccattgacctccttagt
gataatacagcaaaattaacttctgctattacctctctgccagaattgttgaagaaaaaa
gcaaatatagataaacatatgagtattgctatggctttattaaacagcataaagtcacga
aaattagatgtctactttgaaatggaagagaaaattatgggccgcacaactttggagaaa
cctttaatggagatcatcaaagatccagaatgtggtaatgcaaaggataaattgagagtc
ttcttgatactgtacctctgttccagcaacatgactgaacctgaatttaatgagtattta
acggctctgacagaagctggtgctgacactagagccattgcctatttgaagcgttggaag
tcactaatgaagattactgccggtgctgggatgtctgaatatactggtggagtagccaaa
actgtctctatgttctccaaacttatgaatcaaggttctgccttagtagtagagggtgtc
aacttcgtactcaaagaaaacaaactgcctattacaaggatagtagatcatctcatggaa
ctaaaaaacagtgaagaagaaaaagaataccggtactttgacccaaagctacttcgtcca
agtgataacactgctgcaagtcggacgagaaccccgttccaggatgcagttgtctttgtt
gtgggtggtggtaactacatggagtatagtaacatagccagttatgccaagaaaaaagct
ggagctgcaaacaagagggttatatatggatgcacagatgtcattaattcagaacaattc
cttagtcagctcactagactgggtgttgaaatatcctga
DBGET
integrated database retrieval system
