Macrobrachium rosenbergii (giant freshwater prawn): 136828939
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Entry
136828939 CDS
T10429
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03420
Nucleotide excision repair
mrj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
136828939
09124 Replication and repair
03420 Nucleotide excision repair
136828939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mrj03051
]
136828939
03400 DNA repair and recombination proteins [BR:
mrj03400
]
136828939
Proteasome [BR:
mrj03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
136828939
DNA repair and recombination proteins [BR:
mrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
136828939
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
Crinkler
Rad60-SLD_2
Ubiquitin_5
Dsc3_N
Ubiquitin_4
Ubiquitin_2
UBA_BIRC2-3
TECR_N
Motif
Other DBs
NCBI-GeneID:
136828939
NCBI-ProteinID:
XP_066943419
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Position
43:complement(54819234..54842608)
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AA seq
382 aa
AA seq
DB search
MVVLTLKNLQQQTFTVEIELSATVKALKEKVEKEKGGDYPAVGQKLIYAGKILQDDTTLE
SYNIDDKKFLVIMVTKPKPVPPPSTPSDPTAPAESEEASASATATATTPATNTSQSTSNP
PSEAAAAGAPTVTSITTSSTSTPSTQSTPSSQAASAGSVGSAESLLVMGEEFNRMVENIM
EMGYERSLVERALRASFNNPYTAVQYLVDGIPANLEEPSGNPPAGGDGEEQVAAEGEPDP
EEDPLSFLRSQPQFEQMRQMIRSNPSLLDAFLQQIGQTNPQLLQVIQQNQEAFVRMLNEG
GSLGGSGGGNGGNQGSGGGGGGTGGRSASGQSAILVSPQDRDAIERLKALGNFPEDVVIQ
AYFACEKNENLAAEFLFSQTWD
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgctcacgttgaagaacttgcaacagcaaaccttcacggtggaaattgagttg
tcggccacggtaaaagctctgaaagagaaggttgaaaaagagaaaggcggtgactaccca
gctgtaggacaaaaacttatatatgcggggaaaattttacaagatgatacgacgttagaa
tcctataatattgatgacaagaagtttttagtcatcatggttacaaaacccaaacctgtg
ccgcctccctccactccttcagatcctacagcccctgccgagtcggaggaagcgtccgcc
tcagcaactgcaactgcaaccacaccagccaccaacacatcacagagcactagtaatcca
ccttcagaggctgctgctgctggtgctccaactgttactagtataacgacgagtagtaca
tcaacaccttcaacacagtccacaccaagctcacaggctgcctcagcgggaagtgttggc
agtgcagagtctttattagttatgggtgaagaatttaaccgtatggtagaaaacataatg
gaaatgggctacgagcggtctttggtggaacgagcactgcgagctagttttaataatcct
tacacagctgtccaatatttagttgatggcatccctgccaatttagaagagccatcaggg
aaccctcctgctggtggagatggagaggaacaagttgctgcagaaggggagcctgatcca
gaagaggaccccctcagtttcttgcggtcgcaacctcagtttgaacagatgcgacagatg
attaggtcaaatccctcactattggatgcgtttcttcaacaaatagggcaaactaatccc
cagttactacaagttatacaacaaaatcaagaggcctttgttcgaatgcttaatgaaggt
ggcagcttaggaggaagtggtggaggtaatggtggcaaccaaggtagtggtggtggcggt
ggtggtactggtggcagatcagcatcaggccaaagtgcaattttggtttcacctcaggat
agagatgctatagaaaggttgaaggccttggggaacttcccagaagatgtggtcattcag
gcatattttgcctgtgagaaaaacgagaaccttgcggcagagtttctcttcagtcagaca
tgggattag
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