Macrobrachium rosenbergii (giant freshwater prawn): 136829363
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Entry
136829363 CDS
T10429
Symbol
RpI1
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
136829363 (RpI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrj03021
]
136829363 (RpI1)
Enzymes [BR:
mrj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
136829363 (RpI1)
Transcription machinery [BR:
mrj03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
136829363 (RpI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
HMG_box
Nop14
Motif
Other DBs
NCBI-GeneID:
136829363
NCBI-ProteinID:
XP_066943912
LinkDB
All DBs
Position
44:15428465..15441770
Genome browser
AA seq
1686 aa
AA seq
DB search
MGGSGQEHVVIENLGFRIYTDEEIKKISVMRISNPETFNRLGHISANGLYDLRLGPIGSS
DDLCGTCRLNSFSCAGHCGHIELPLPVYNPVFYEALKSIVAHICLSCYKFVAKKERILQL
TYQIKLLDMGFLAEAVELEDYVSQVLSCAKTIEAEEEVHRKNKKDGGRRLPSSIFHILTV
KLDSYLAEVIQKGTSYGQVTSNVNDVRETIRKKFWDSNSVPKNCPFCGRLFEKLILQSCR
FVKKYSVYQKINYENGNDSEVPQSVLTPKQVQFALRKCWKTDKIILSALYPLLSVTGIEY
PTDTFFLNTLLVVPPKFHPYTKIMDGYISEHKSIAVLKNIIKLSMYIGPLVSFLNGSLKE
IPEDLVLLYKEISGATFEEKCQNMWYQIQCNVNVLYDAKLNLTNTKQVTQKGIKQILERK
TGLMRHNLMGKRVNFSARSVAAPDPHIAIDEVGVPMDFAIKLSYPVPVNDWNAEEMRVLV
MNGPEKYPGALMIEDEEGKKVHLTRMDKFQRSALAKKLLTPPESCTRRVNVQKIVYRQLK
NGDYVLMNRQPTLHRPSIQAHRARVMPKDRVLRMPYANCKAYNADFDGDELNMHFPQNEL
ARSEAKHIVTTHNQYLTPKDGSPLAGLIQDCVVSSVKISMRGKFFNREDYYQLVYAALPN
QTGKIVVLPPCILKPQQLWSGKQVISTLLHNVIPSGKAKPSFTFKTSVKVDIWQTKVARR
WRGGGIPEKKRDALTESEFIMREGELMSGVVDKCAIGSTSHGLIHICYELYGGSVAYKLM
TAINRLCVYYLQWVGHTITAKDFVTPFYASHTRRESLKQLISDAPCDVFKKLDVLETEFQ
DYFESAHMANNEKNIAAIDAAYTSALGPSTSRITAKNEKHLLRPNLDNQMKMMVDTGAKG
SKVNMNQMASLFGSVAIDGKRMPLSIAGKSLPSFKSYDIDPRSGGYIPDRFMTGINPKSY
FFLCIVGRDSLQHTAVKTANSGYVQRCLIKHLEGIHVDYDMTVRNSDGLVLQFNYGEDGL
DVTKVPFLSDVATVDVLVNNYSRLLDSHTLSTALSLSNQEQVKFLEKQKKKIDKHNIGTR
RQSGFLRFCKKMQDSVQLEGYSRDSGRTNTSLKLQELWHRLPLEEKNKYNKKVKKIPDPV
NSRFAGASNLGVVSEALDTLIEKYYNGYYMKRPVAEQKLSQEEVKQTIHMKALMSTVDPG
EAVGALCAQALGEPLTQMTLNTFHFAGKDELNVTLGVPRMIEILRTGSKNMSTPIMEIPF
YPHVTKQQAERLRLMLSEVALSKVLHKMNVVSRLQFDTSGMLRRLVKVKLSFLPQKHYKH
LYAVTPADILAHVERCFISKITREIGKCLKREKIYCSVRERKKEVIRANKENEEELAEEV
DENVDEKDDIDVSNSDDEGGDDEDASLKGEGQDYSEGEEEDEEEEVVGEEMPEADNNEGG
REDGSSESCSTFRKKTKSSVSEEEATKRIEGLRDCVTWINDYDLDREKQLWCEVEFMLPV
ADGTYDMVSIVRELSEQSLVRNVSGIRRVFVVEKDNELVLRTEGVNVLRMFAFEHLLNVN
KLYTNNIHQVAQMYGIEAAQRSIIREIRAVQSAYDIKVDFRHLSLLADYFTCEGTYKACS
RKAITSCSSPIQKMSFETCTQFLKTALTQTEIESMESPSSNIVVGQPPKLGTNAMHLRYL
FNKSYS
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atgggaggctctggtcaagaacatgttgttattgaaaaccttggttttcgaatctacact
gatgaagaaattaagaagatatctgtgatgcgaatatccaatccagaaacttttaatcgt
ttaggacacatttcagcaaatggactgtatgatcttcgtttagggcccattggatccagt
gatgatttatgtggtacatgtcgtttgaattctttcagttgtgcaggtcattgtggtcac
attgagttacctcttcctgtttataatcctgtcttttacgaggcattgaagagtattgtt
gcccatatctgtttgtcatgttataaatttgttgctaagaaggaaaggatcctgcaactc
acataccagattaaacttttggatatgggtttcttagcagaagctgtagaattagaagac
tatgtttcacaggtcctttcatgtgctaaaaccattgaagccgaggaagaggttcatagg
aaaaataagaaggatggaggtaggcgcttaccatcatccatctttcatatcctaactgta
aaacttgattcttatttggctgaggtaatccagaaaggtacttcctatggacaggtgaca
tcaaatgtaaatgatgttcgagaaacaataaggaaaaagttttgggatagtaacagtgta
ccaaaaaattgcccattctgtggccgcttatttgaaaagctgattttgcagagttgtcgg
tttgtaaaaaaatacagtgtatatcagaaaatcaattatgagaatggtaatgatagtgaa
gttcctcagtcagtcttgactccgaagcaagtacagtttgctctaaggaagtgttggaaa
actgataaaattattttgagtgctttatatcccctgttatctgtcacaggtatagaatat
cccacagatactttttttcttaacactttgctagtagttcctcccaagtttcatccttat
accaaaataatggatggttatatttcagaacataagagtattgcagttttgaagaacata
ataaaactgtcaatgtatattgggccacttgtgtcattcttgaatggctctctaaaggaa
atcccagaggatttagtactcttgtataaagaaatatcaggggctacattcgaagaaaag
tgtcagaatatgtggtatcaaatacagtgtaatgtcaatgttttgtatgatgcaaaatta
aacctaaccaatactaaacaagtcactcaaaaaggtattaaacaaatcttagagagaaag
actggattaatgagacataatctcatgggtaaacgagtaaatttctctgctcgttcagtg
gctgccccagatcctcatattgctattgatgaagttggagtgcccatggactttgcaatt
aaactttcatatcctgtacctgtcaatgactggaatgctgaagaaatgagagtacttgtt
atgaatggaccagaaaaatatccaggtgcactaatgatagaggatgaagaagggaaaaaa
gtacatcttacaagaatggataaatttcagagaagtgctcttgccaaaaaacttttaact
ccacctgaatcatgtaccaggagagttaatgttcaaaagattgtgtatcgacaattaaag
aatggagattatgttttaatgaacagacagccaacacttcatcggcctagcatacaagct
catcgtgcccgtgtgatgccaaaagatcgggtattacgtatgccttatgccaactgtaag
gcttataatgctgattttgatggagatgagttaaatatgcactttcctcaaaatgagctt
gcccgcagtgaggcaaaacacatagtaacaacacacaatcaatatctaacgccaaaagat
ggatctcctcttgctggtcttatacaagattgtgtggtttccagtgtaaagatttcaatg
cgtggaaaattttttaatagagaagattattaccaactagtgtatgctgcactacctaat
caaactggtaaaattgtggtgttgcctccgtgtatactgaaaccacaacagttgtggtca
gggaaacaagttatatccactcttctgcataatgttattccatctggtaaggccaaaccc
tcatttacttttaaaacttctgttaaggttgatatttggcagactaaagtggctagaaga
tggagaggtggtggaatacctgagaagaaacgagatgcattaactgaatcagaatttata
atgagagagggtgagttgatgtctggtgttgtagataagtgtgccattggatctactagt
catggtttgattcatatttgttatgagctttatggtggctctgttgcctacaagttaatg
acagccataaatcgtctgtgtgtttattaccttcagtgggttggccatactattactgcc
aaagattttgttacgccattttatgcttctcatacacgtagagaatctttgaagcagttg
attagtgatgcaccatgtgatgtttttaagaagttagatgttcttgagactgaatttcag
gactattttgaatcagcacatatggctaataatgaaaagaacatcgcagctattgatgct
gcatatacatctgcattaggcccaagtacatcccgaataactgctaaaaatgaaaagcac
ctcctgcgacccaatttagataatcagatgaaaatgatggttgatacaggtgctaagggc
tcaaaggttaatatgaatcagatggcttccctttttggctctgttgcaattgatggcaaa
agaatgccactaagtattgcaggcaaatcacttccatcattcaaatcttatgacattgat
ccacgctctggtgggtacattcctgatcgtttcatgacgggaatcaatcccaaatcttac
ttttttttgtgtattgttggacgtgatagtttacaacatacagctgtgaaaacagcaaat
agtggttatgtacaacgttgcctaattaaacacttggaggggattcatgttgactatgac
atgactgttcgtaatagtgatggtttggtactacagtttaattatggagaagatggttta
gatgttacgaaagttccattcttgtctgatgttgctactgtggatgtactagttaacaat
tacagtcgccttttggacagccataccttatcaactgcattatctttgagtaaccaagaa
caggttaagtttttagaaaaacagaaaaagaagatagacaaacataatataggaacaaga
cgtcaaagtggatttcttaggttttgtaagaaaatgcaagattctgttcagttggagggc
tattcgcgtgatagtggtcgtacaaacactagcttaaagttgcaggaactttggcacaga
ttgcctctggaagaaaagaataagtacaataaaaaagtaaagaagattccagacccagtt
aattctaggtttgcaggtgcttcaaatttaggtgttgtttcagaagctcttgatactttg
attgaaaaatactataatgggtattatatgaaaaggccagttgctgaacaaaaactgtcc
caggaggaagttaagcaaacaattcatatgaaagctctaatgtccacagttgatcctgga
gaggcagttggtgcattgtgcgctcaagcacttggtgaaccactaacacagatgactctt
aatactttccattttgctggaaaagatgagcttaatgtcactctgggtgttcctcggatg
atagagattttaagaactggttccaaaaatatgtctactcctataatggaaattcctttc
tatccacatgtaaccaagcagcaagcagaaaggctccgattaatgttatcagaggtcgcc
ttgtctaaggtattacacaagatgaatgttgtgtcaaggcttcaatttgacaccagtggg
atgttacgcagattagttaaggtcaagttaagcttccttccacagaagcattataaacat
ctatatgctgtgactcctgctgatatattagcacatgttgaaaggtgtttcatatccaaa
ataacaagggaaattggtaaatgtcttaaacgtgagaaaatatattgctcagtgagagag
cgtaaaaaggaagtgataagggctaacaaagaaaatgaagaagaactggctgaggaggta
gatgaaaatgtggatgaaaaagatgatattgatgttagtaatagtgatgatgaaggtggt
gatgatgaagacgcttctttgaaaggtgaaggtcaagattactcagagggggaggaggag
gatgaggaggaggaggtggtgggtgaagagatgcctgaagcagacaataatgaaggaggg
agggaagatggttccagtgaaagttgtagcactttcagaaagaaaacaaaatcttcagtg
agtgaggaagaagctaccaaaagaatagaaggtttaagagactgtgtaacatggattaat
gactatgacctagatagagaaaaacagttatggtgtgaggtagagttcatgttgcctgta
gcggatggtacttatgatatggtgtctattgtgcgagaactttcagagcagtcgttggtt
agaaatgtttctggaattcgccgagtatttgttgttgaaaaggataatgaactagtgtta
agaacagaaggtgttaatgtgttgcgaatgtttgcatttgaacatttacttaatgtcaat
aaactatacacaaataacattcatcaagtggcacaaatgtatggcattgaagctgctcag
cggtccataattcgtgaaataagagctgtgcagtctgcttatgatataaaagttgacttc
cggcatctcagtcttttagctgattattttacttgtgaagggacatacaaagcttgttca
aggaaagctataacatcgtgctcctctcctatccaaaagatgtcatttgaaacgtgcaca
cagttcctcaaaactgcacttacacaaactgaaatagaaagcatggagtctccgtcctca
aacattgttgttggacaacctcctaaactaggaactaatgctatgcatttgcgttacttg
ttcaataaatcatattcttaa
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integrated database retrieval system
