Macrobrachium rosenbergii (giant freshwater prawn): 136829764
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Entry
136829764 CDS
T10429
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136829764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrj03021
]
136829764
03036 Chromosome and associated proteins [BR:
mrj03036
]
136829764
Transcription machinery [BR:
mrj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
136829764
Coactivators
SAGA/TFTC/STAGA complex
136829764
Chromosome and associated proteins [BR:
mrj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
136829764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
ELP3_N
Motif
Other DBs
NCBI-GeneID:
136829764
NCBI-ProteinID:
XP_066944732
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All DBs
Position
45:complement(20618779..20658766)
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AA seq
882 aa
AA seq
DB search
MATSNSLDEVLCSNPETAAVSAVLAPVDSDLTEPSGALANDDDGGGVRAGGAIEAARKSE
PSIGVRVPANKLVCGGVVSIGGQGPLRPPPLGGVLLGHQGSSTTSSSSSSASSTSSTSTS
TSCVYGVVPTPMTGGHQGGTVNGGVPVGGTLNANVVVKGLSNKVVVGGGSAAAAAAAAAA
AAAAAAAVAQQQPAVIMSKPGTVTAVPSTATPGNVSSLSPAAGGMQIINMRPGTIRPGQG
ATTTLGPRMILSQAQVLPGVRQGQPGLTLGTLQGLPPGAQGHLLVKTENGQLQLLRVNTA
AAPAAPGQISGTTVTTTALQQAPNAAYRFQQPQNTAVLSTATTTTTIATQAASTGTVTTI
PAVPVSTVAGTIITPTTLTTATPATQTPQPTTTTTTTVGQTITAESAKTKCKNFLATLLK
LANEQRAPVARNVRNLIQGLIDARVEPEAFTEELQKDLNSSPQPCLVPFLKKTLPYLRVS
LARGELTIDGVRPPPLSSVTPVTGVTTVIPTMSITRPGTPAASGTVRMVPPTAATATTVV
QRPPNATATSTRVVAQQVQQVRVQSGKTVVTTVRQTPSTQTTTAPITTTTTTTTTATVPT
VTKAVTVNKAIPTKDKDKSKDKVFTYSSSYTSSGVTDDDINDVAAMGGVNLGEESQRILD
STGFVGTQIRSCKDENFLLTAPLSQRIRQICSKYGLGDAPKDVVALISHATQERLKTIVE
KLAVISEHRLDIIKSDNRYEVHQDVKGQLRFLEELDKLEKKRKDEQEREMLLRAAKSRSK
SEDPEQAKLKAKAKEMQRVEMEEMRQRDANRTALNALQGPKKKPKLDLSSAEEGGTFSGT
FTQKAMPLRPRIKRVNMRDLMFLMEQEKELNKSLLLYRSYLK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagtaacagcctggacgaggtgttgtgcagtaacccggagacagctgctgtc
agtgccgtgctcgcgcccgtcgacagtgacttgacagagccttccggagccctcgcgaac
gacgatgacggtggaggcgtgcgtgcgggcggtgcaatagaggcagccaggaagagtgag
cctagtataggggtccgtgtcccggctaataagttagtgtgtggtggcgtggtctcgatc
ggtggccaagggcctctccgacctcctcctctcggtggcgttctcctcggccaccagggg
agctcgaccacgtcctcctcctcctcctccgcctcctccacctcctccacctcgacctca
acctcctgcgtctatggtgtagtcccgacgcccatgaccgggggtcatcaggggggcaca
gtgaacggcggggtgcccgtgggggggacgctgaatgccaacgtcgtcgtgaagggactc
agcaacaaggtggtggtggggggagggtcagcagcagcagcggcagcagcagcagcggcg
gcggcggcggcggcagcagcagtggcacagcagcagcccgctgtgatcatgtccaagcca
ggcactgtgactgctgtgccctccacagccaccccaggcaacgtgtccagcctgtcccct
gcggcggggggcatgcagatcatcaacatgcgcccgggcaccatcaggcccggccagggc
gccaccaccaccctggggcccaggatgatcctgagccaggctcaggtgctgcctggggtc
aggcagggtcagccagggttgaccctgggaacactccaaggactgccccctggagcacag
ggccatctgctcgtcaagactgaaaacggccagttacagctgctgcgtgtcaacacagcc
gctgcacctgccgccccaggccagatttcaggaacaaccgtgaccaccacagctttacaa
caagcccccaatgctgcctatagatttcaacagccacaaaacactgcagttctttctaca
gcaaccacaaccactaccatagctacccaggcagcgtcgactgggacggttaccaccata
ccagcagtacctgtgtcaacagtcgctggaacaatcatcactcctaccaccctcactact
gccaccccagcaacccaaacgcctcaacccaccaccaccaccacaacaactgtaggacaa
accatcacggcagagtcggcaaaaactaagtgtaaaaacttcttagctactttattaaag
ttagcaaatgaacagcgagctccagtcgctcgcaatgttcgcaacctaattcagggattg
attgatgccagagtcgaaccggaggcattcactgaggaactgcagaaggacttgaactcc
tcccctcaaccatgccttgttcctttcctcaaaaaaactttaccctacctacgtgtgtcg
ttggcgagaggagagcttaccatcgatggtgttcgtcctcctccactatcatcggttaca
ccagttacgggtgtcactacagtcatacctactatgtctataacaaggccaggaacccca
gctgcatcaggaacagtgcggatggttcccccaacagcagccacagctacaactgtagtt
caacggccaccaaacgccacagcaacatctacaagagtcgttgcgcaacaagtacaacag
gtgcgtgttcagagtgggaagaccgtagtgacaactgtaaggcagactccgtcaacacaa
accactactgcacccatcaccactactaccaccaccaccaccaccgccactgttccaact
gtgaccaaagctgttaccgttaataaagcaatccctaccaaagataaagataaaagtaaa
gacaaagtatttacttacagcagttcctatacgtctagcggtgtgactgacgacgacatt
aatgatgttgctgctatgggaggagtcaacttgggcgaggagtcgcagagaattttggac
tcgacgggctttgtggggacgcagatacgttcttgtaaagatgaaaattttttattaacc
gctccattatcacaaagaatacggcaaatatgctcgaaatatggcttaggagatgctcca
aaggacgttgtggctctcatatctcatgcaacacaggaaagattaaaaactattgtggaa
aagttagcagttatatcagaacacagattagatatcattaagagtgacaaccggtatgaa
gtacaccaagatgtcaaaggacaactccgttttttagaagaactcgacaaactagagaag
aagcggaaagacgaacaggagagagagatgctcttgagagcggcaaagtctagaagtaaa
tcggaagacccagaacaggcaaagttgaaagctaaggccaaggagatgcaacgtgtggag
atggaggagatgaggcagagagatgcaaatcgaacagccctcaatgctttacaggggcca
aagaagaagcccaagctcgatctgtcatcagcggaagagggtggaacatttagtggaacg
tttactcagaaagcgatgccattacgacctcgcatcaagagagtaaacatgagagatcta
atgtttttgatggaacaagagaaagaactcaacaaatcattattgttataccgctcgtat
ctcaagtag
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