Macrobrachium rosenbergii (giant freshwater prawn): 136830356
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Entry
136830356 CDS
T10429
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
136830356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mrj03009
]
136830356
Ribosome biogenesis [BR:
mrj03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
136830356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
AAA_16
RuvB_N
AAA_22
AAA_5
AAA_28
AAA_33
AAA_18
nSTAND3
RNA_helicase
nSTAND_NTPase5
AAA_14
Rad17
TIP49
TsaE
Mg_chelatase
IstB_IS21
DUF815
T2SSE
Zeta_toxin
PduV-EutP
Vps4_C
AAA_30
Kinesin
AAA_29
ATPase
NPHP3_N
AAA_17
DEAD
DUF7090
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
136830356
NCBI-ProteinID:
XP_066945954
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All DBs
Position
46:53717867..53743321
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AA seq
811 aa
AA seq
DB search
MKRPYLQEKSLLPRIASYVKENKNVDIDELTDYLMENFREFQHKVRHKFMTSVEKAYLWH
IYNNPEDMPDSDPEEIIDSDGGGPDILEVTEVNGSMNETLKNMYKSKTSTPRRNDRNGVD
KFSSDNDRKSTRKKKKRVREEDIEEAIIKKKKKQKLPEQSAITFEKMAGIDSLKDKICDL
IANIRRPSVLQPLQKSVLVTGPTGSGKTTFGFALAGTAEALIYRITSSELFGGPTGDVEG
KLSEIFEQAASLAPCVILIEKIDLIAPKDGSAKSLEKRISVQLSACLSALKAKYKDQQII
VIGETSHPENMDWDLRSSFDAEIFMAIPSEAARYEILQLLCQDVNYVGDLEELAHRTPGY
VAGDLKRLIEKAQSLAWKRKKDSLYGKIEGITLFEEVKIFMSRFEKMCDKEGDSSSITIN
MEDFMEALMHIIPALKREGFPTVPEITWQDIGGLEDIKKELREKILEPIKYSKLHEEFGA
SRPNGILMWGPPGCGKTLLAKAVANEAGINLLPVMGPELLNMYQGESERAVREVFRRAGN
VAPCVIFFDEFDSLCPIRTKGGESGSKTTIVNTLLTEMNGFAKRDDVYVIAATNRPDILD
PAVTRPGRFDTLLYVDVPDYLGRISIFKARTKNGTCPALADDVSFEEISRVCNNFSGADC
DQLVYLASKEAIREVIQNMDSTGVEETLNTSEVVSAESGKNIKRLVSKKHFFAALKKMKP
SISVEEQKRYKKLYNKICVSPNEDLAELLMSSVVVPAQESNLQTEVESTPQEALESESTA
TTPQKTVEDIDSGDVSESTSEIVNDVSSQPD
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggccatatctgcaggagaagtcgttactccctcgaattgcctcgtacgtgaag
gagaacaagaatgtggacatagacgagctgacggactacttgatggagaatttcagagag
ttccagcataaagtccggcacaagttcatgaccagcgttgaaaaagcatacctctggcat
atttacaacaacccagaagacatgcccgacagcgaccctgaggaaatcattgatagtgat
ggaggagggccagatatattggaagtaactgaggtgaatggcagcatgaacgaaaccttg
aagaacatgtacaaatcaaagacctctacgccaaggaggaatgatcgcaatggagttgat
aagtttagttcagacaatgatcgtaagagcacaagaaagaagaagaagcgggtgagagag
gaagacatcgaggaggcgatcatcaaaaagaagaagaagcagaaactcccagagcagtcc
gctataacgttcgagaaaatggccggaatcgactcgctcaaagacaaaatctgcgacctg
attgcaaatattcgcagaccctcagttctgcaaccgctccagaagtccgttctcgtcacc
ggtcctactgggagtgggaagacaacgtttggctttgctcttgcagggaccgcagaagcc
ctcatctaccgcatcacgtcttcggagttgtttggcggacccacaggggacgttgaggga
aagctcagcgagatattcgagcaggccgcgtcgttggcgccgtgcgttatcctgatagag
aagatcgacctcatcgctccgaaagacggcagcgccaaaagtctggagaagcggattagc
gtccagctttctgcttgtcttagtgctttaaaagcaaaatacaaagatcagcaaataata
gtgattggtgagacgagccatccggagaacatggactgggatttgcgcagcagcttcgac
gcagagatattcatggccattccctcggaagctgccagatacgagatcttgcagctgctg
tgtcaggatgtcaactatgtgggagaccttgaagaactggctcaccgaacgcctggttac
gttgccggggatttgaagagattgatcgaaaaggctcagagtctcgcctggaagaggaag
aaggactctttgtacggaaagatagaaggtataacactgttcgaggaagtcaagatattc
atgagcagatttgaaaagatgtgcgataaggaaggggacagttcctccatcacaataaat
atggaagatttcatggaagccctgatgcacatcattcctgccctgaaacgcgaaggattc
ccaactgtgccagaaatcacttggcaggacataggcggtttggaggacatcaagaaggaa
ctgcgggaaaagattcttgaacccatcaagtattcgaaacttcatgaggagtttggtgca
agccgccccaatggcattctgatgtgggggcctcctggctgcggtaaaactctgctggcc
aaagcggttgccaatgaggctggtatcaatttgctaccagtcatgggaccggaacttctt
aacatgtaccaaggagagagcgagagggccgttcgcgaggtgtttcgacgggccggcaac
gtagctccgtgcgtcatattctttgacgaattcgattcgctttgccccatcagaaccaaa
ggtggagagagtgggagtaaaacaactattgtcaacacgctcttgacagaaatgaacggc
tttgcaaaacgcgacgacgtctacgtcattgccgccacaaatcggcccgatattttggac
ccggccgtgacgcgaccaggaagattcgataccttgctgtatgtggacgtgccagattat
ttgggcaggatttcgattttcaaagctaggacgaagaatggaacttgcccagccttggcc
gatgacgtcagtttcgaagaaatatctcgagtttgtaacaacttctccggcgcagactgc
gaccagttggtttacttggccagtaaggaagcaattagagaagtcatccaaaatatggat
tcgactggtgtggaagagacgctgaatacgagcgaggttgtgagcgcagagtccggaaag
aacataaagagactggtgtccaaaaagcacttctttgctgccctgaagaagatgaagcct
tccatttccgtagaggaacaaaagcgatacaagaaactctacaacaagatatgtgtttca
cccaacgaagatttggcagaattgctcatgtcttctgttgtcgtccctgcgcaagagagt
aacttacagacggaggtagaaagtacacctcaggaggcattggagtcggaaagtactgca
actacgcctcagaagaccgtagaagacatagacagcggagacgtatcggagtccacgtct
gagattgtcaatgatgtcagtagtcaacctgattga
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