Macrobrachium rosenbergii (giant freshwater prawn): 136830479
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Entry
136830479 CDS
T10429
Name
(RefSeq) LOW QUALITY PROTEIN: trafficking protein particle complex subunit 8-like
KO
K20305
trafficking protein particle complex subunit 8
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mrj04131
]
136830479
Membrane trafficking [BR:
mrj04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
136830479
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_C
Ig_TPPC8_2nd
SpecificRecomb
Motif
Other DBs
NCBI-GeneID:
136830479
NCBI-ProteinID:
XP_066946114
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Position
46:46296626..46376667
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AA seq
1357 aa
AA seq
DB search
MRNPIRAEAVSFRPYQCVTVGDGHQRTMVQFGVKVGGHLRTVIAPGTRQGLELELQCTTP
WFEAWRDMFLHVQYPSDHEFTKHYIACIIVIASTSENPLDQLNRLSQYQHQQHHQTPARF
PKWFSPNILKFYLLIHDVAAGDYQRSDQLFEQMTSMYGGVNCHILKINSRQADQGDLHLP
DPXVSFDPARCIYXPLCAKSSETSSGTGTHNHEDVSGLPFTLLTEGDTTDNCEPIHPLSP
VAPPEEEKNGKFDMMPGVEISADVPVLVNRPSLPSGVTQHHGGCLTTLEDVDAIRTFVND
FCIKALSPHVERQIRYLNEAVTNRSRSKSLLSATRHWLGGNKSPGSATNSVIYSPEATEL
QTRRLGDLCFMFGLYELAYSSYHTAKNDFKSDQAWLYFAGAQEMAALAAFMNNSADYPKR
YLEGSLQTYLNVCKVYNFAIRATLLSTEVLKYCGDFGEAAMMFIKLTSEESDLLSALMLE
QAAHCFINSQRPLPRKYAFHMTLAGHRFSKAGQRAHSLRAYKQAFQVYARRGWVLAEDHI
HFTLGKQAHHLKQLSESLGAYSLLVDQRLKEDSPSQQSQSQQMTYVREFMNTFHQYVQQE
WDPSTGLPCLPLPIIDSQATKVLLGAPQELQNAGWTAASGVSLDIEIGADKRWYALEQEL
LSVAHASSFSVFRPNLNLLSNNTPNTVSPFVPVNEPVFVEVFMKNPLTVSLMISDVQLIF
KFEKTDKSENVEVPVKHSTFPGFNIPAGAQETVRLELYPQCIGHLLITGVQYKLGLTPDM
LSGSLSSSPPVVIEGQQTIEVRGTRLNTTNVEKCSVVYSKDKRLEVSVVAPLSRLSVAFQ
NIPGILSCGELFSTDAVITNTGPCAISKLMLAVSDPKSVYMSLEECELPAKNVCVLSDSQ
MGDVKISGRAKILPLPNGVLRSGETIGAKLWLHAPQSSGAFDVELLFYYETEDSPPKTSF
TCKHIFGTIPSEKDSQFLLPFLGPIGFKDGCRDLTFWCFHWLGNLVVEAHNCSEVDTSCS
SYTVIGISANSKKWAVLPHSPLQDQKLGGDESCHLCVQCIPYHTSDVPLVLSQLHFSNNK
IPLCSWWRFTLRERIKLLDLLADPPPPNPTADHIPPPPTQAQKDARDMIAADTLDMVVTV
LWMGLRNGIQTWGQHSVHLQNLCDSVCVPNLSLIQTGEEEKPPIRIIPEVPLPPIQSPLP
APDKQKHLVKVSANFPSLVEHDFIVSRLCSIKFELHLQNCSACCLVTHLNLSPECLSVST
GNTSNHMYSPQSSTQVLYVGGTVRKITLQPWEFSKVPVCALVTLPGTYSLGTFSLTALRQ
HADSSEAPVPQMCQLQTAVVVRESNSKVSHHHHSHNS
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaccccattcgcgctgaagccgtgagttttcgaccatatcagtgtgtaactgtt
ggtgatgggcaccagcggacgatggtccagtttggggtgaaggttggcggtcatttgagg
actgtgattgcgcctggaacacgtcaaggtcttgaactagagctacagtgtacaactcct
tggtttgaagcttggcgagacatgtttcttcatgtgcagtacccttcagatcatgaattt
actaagcattatattgcttgtattatagtcattgcaagcacgagcgaaaatcccttggat
cagctaaatcgtttgtcgcaatatcagcatcaacaacaccaccagaccccagcccgtttt
ccgaaatggttttcaccaaacattctcaagttttatcttctgattcatgatgttgctgcg
ggagattatcagagatcagatcagttgtttgagcagatgaccagtatgtatgggggtgtg
aattgccacattttgaaaataaattcaagacaagctgatcaaggtgatttgcatctacca
gatccttgagtcagttttgatccagccagatgcatctattgaccattatgtgcaaaaagc
tcagaaacaagcagtggcacagggacacataatcatgaagatgtaagtggccttcctttc
actctattgacagaaggcgacaccactgataactgtgaaccgattcatcctttgtctcct
gttgcacccccagaggaggagaaaaatggaaagtttgatatgatgccaggggtagaaata
tcagcggatgtccctgtcctagtcaatagacctagcttaccatcaggtgtcacgcaacat
catggcggatgcctgacaacgctagaagatgttgatgctattcgaacttttgtgaatgat
ttctgcattaaagctctgagtcctcatgtggagagacagattagatatttgaacgaagcg
gtaactaatcggtctcgttcaaaatcactcttgagtgctactagacactggttaggcggg
aataaaagtccaggaagtgctacgaattctgtcatttatagtcctgaggccacagagctt
caaacaagaagacttggtgatttgtgcttcatgtttggtttgtatgaattggcctatagt
tcatatcacacggccaaaaatgactttaagagtgaccaagcgtggttgtattttgctggt
gctcaggaaatggctgccctggctgcctttatgaacaacagtgctgattacccaaaacgc
tacttagaggggagtttacaaacttacttgaatgtctgcaaggtttataattttgccata
agagctacgttgttgagcaccgaagttttaaaatactgtggggattttggtgaagctgcc
atgatgttcattaagctgacatctgaagagagtgatctgctgtctgccttaatgttggaa
caagctgctcactgtttcatcaactctcaacggccactgccaagaaagtatgccttccat
atgacactggctggacaccggttcagcaaagcgggccagcgtgctcattctttaagagcc
tataaacaagcttttcaggtttatgcaaggagaggttgggttcttgctgaggatcatatt
catttcacacttggaaaacaagctcatcacctcaagcagctctcggaaagcctgggtgcc
tacagcctcttggttgatcaacgtcttaaagaagactctcctagtcagcagtctcagtca
cagcagatgacatatgttagggagttcatgaacaccttccaccagtatgtacaacaagag
tgggatccttcgactggtcttccgtgtcttccattaccgattatcgattcacaggctacc
aaagttttactgggagctccccaggagctccagaacgctggctggactgctgcctcaggt
gtgtcgttagacattgagataggtgctgataagaggtggtatgccctagagcaggaattg
ttatcggtggcacatgcctcaagtttttcagtatttagaccaaatctaaacttgctcagt
aataatactccaaacactgtatccccgtttgttcctgtgaatgagcctgtgtttgtagaa
gttttcatgaaaaatcctcttaccgttagtctgatgattagtgatgttcaactcattttt
aaatttgaaaaaacggacaagagtgagaatgtcgaggtcccagtgaaacattctacattt
cctggtttcaatattcccgctggtgctcaggaaacggtacggctagagctgtatcctcaa
tgtataggtcatttgttaattactggagttcagtataagttaggtcttacgccagatatg
ctatcaggatctcttagttcttccccacctgttgtgatagagggtcaacaaactattgag
gtgcgaggaaccagattaaataccactaacgtggagaagtgcagtgttgtatatagcaaa
gataaaagattagaagttagtgtagtggccccattgtcaaggttaagtgttgctttccag
aatatccctggcatcttgagttgtggtgaacttttctctactgatgccgtcatcaccaac
accggaccttgcgcaataagtaaattgatgctggcagtatctgatccaaaatctgtgtac
atgtccttagaagagtgtgaattgccagccaaaaatgtgtgcgtgttgtctgacagccaa
atgggtgatgtgaaaatctcaggtcgtgcaaaaatcctccccttgccaaatggggtgctc
cgatcgggagagacgattggtgccaagttgtggctccatgcgccgcagtcatctggggcc
ttcgatgtggagttgctcttctactacgaaactgaagactctcctccaaagacaagcttt
acttgcaagcacatttttggtaccatacccagtgaaaaagattctcagttcttgttaccc
tttctgggacccataggatttaaagatggatgccgtgatttaaccttttggtgttttcac
tggttgggaaatcttgttgttgaagctcacaattgttcagaggtggacactagctgtagt
tcgtatactgtcattggcatcagtgccaatagcaagaagtgggcagttttaccacattcc
ccgttgcaagaccaaaagctaggaggcgatgaatcttgtcatttgtgtgtccagtgcatt
ccatatcataccagtgatgtgccattagttttatcacagcttcactttagtaataacaaa
attcccttgtgctcatggtggcgatttactctgcgggaaagaatcaagctcctggatctt
ctggctgatccacctccccccaacccaacggcagatcacatcccccctccgcccacccaa
gcacaaaaggatgctcgtgatatgatcgcagctgataccttggatatggttgttacagtt
ttgtggatgggcctgaggaacggaattcagacgtggggtcagcacagcgtccatctccaa
aatctttgcgactcggtttgcgtgccaaacttatcactgattcagacaggagaggaggaa
aagcctcccatcagaatcattcctgaagtaccccttcctccaatacagtcgcctctccct
gcacctgataaacaaaagcatttagtgaaagtttctgctaatttcccaagtcttgtcgag
catgatttcattgtgagcagattatgcagcataaagtttgagttacatcttcaaaactgc
agtgcctgttgtcttgtcactcatctcaacctcagtcctgagtgtttgtctgtaagtact
ggaaacacgagtaaccacatgtactcgccacagtcgagcacccaagtgctgtacgttgga
gggacggttcgcaagatcactttacagccttgggaattcagcaaggttcctgtatgtgcc
ttggttaccctaccaggtacttacagtttaggaacatttagcctgactgccttgagacag
cacgcagactcctccgaagcacctgtgccacagatgtgtcagcttcagacagctgtggtg
gtcagggaatcgaatagcaaagtcagccatcatcatcattcccataacagttag
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