Macrobrachium rosenbergii (giant freshwater prawn): 136830970
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Entry
136830970 CDS
T10429
Symbol
Prp8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136830970 (Prp8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrj03041
]
136830970 (Prp8)
Spliceosome [BR:
mrj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
136830970 (Prp8)
Complex C
U5 SnRNP specific factors
136830970 (Prp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
136830970
NCBI-ProteinID:
XP_066947028
LinkDB
All DBs
Position
4:20108908..20139850
Genome browser
AA seq
2374 aa
AA seq
DB search
MALPPYLIPGSPWAYMAQQQAQLAAAQAQAAHAQMHAHFQAQAQAQAQAQSIPRSQAGPP
PVENVSLEKMQEKARRWQQLHNKKYAEKRKFGFVDVQKEEMPPEHIRKIIRDHGDMSSRK
YRHDKRVYLGALKFMPHAVLKLLENMPMPWEQIRDVQVLYHITGAITFVNEIPWVIEPVY
ISQWSTMWMMMRREKRDRRHFKRMRFPPFDDEEPPLDFADNVLDVEPLEAIQMDLDPEED
VEVVDWFYEHKPLIDTKYVNGPTYRKWRLTLPQMATLYRLANQLLTDVSDNNYFYLFDLK
SFFTAKALNMALPGGPKFEPLIKDMNPADEDWNEFNDINKIIVRHQVRTEYRIAFPYLYN
NMPQYVHLSWYHTPVVLYIKTEDPDLPAFYFDPLINPISHRNTVKSETLLPDDDEDFELP
DDVEPLLKEWQLYDDATANGIALLWSPRPFNMRSGTMRRAIDVPLVKTWYREHCPPGQPV
KVRVSYQKLLKYFVLNALKHRPPKAQKKRFLFHSFKATKFFQTTTLDWVEVGLQVCRQGY
NMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDAH
VQYRLNNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHVIYYRFNTGQV
GKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHF
DLELRASVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILR
YVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNMGRLTRLYLKSEQERQHNYQKDGPYI
SPEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQR
EELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDAY
LDQYLWYEADKRRLFPPWVKPGDSEPPPLLVYKWCQGINNLTDVWDTADGECNVMLESKY
EKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVDINYKDMNHTNRYGIIRGLQFASFIV
QYYGLVMDLLVLGLKRSADMAGPPQMPNDFLNFQNVATETQHPIRLYSRYIDRIHIFFRF
TAEEAKDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRL
PRSVTTINWENSFASVYSKDNPNLLFNMAGFECRILPKCRMTHEEFKHRDGVWNLQNEVT
KERTSQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYYRESVVNT
QELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLR
WSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWETEFLDSQRVWAEYALKRQEATAQNR
RLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQFQVLKQNPFWWTHQRHD
GKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNA
QRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHL
WQKIHESVVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAYKWNYSK
PSLLADSKDTMDGSTTQKYWIDVQLRWGDYDSHDVERYARAKFLDYTTDNMSLYPSPTGV
LIAIDLAYNLHSAYGNWFPGAKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEP
YLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKI
IHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPN
IVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKNISSYTAFSRLILILR
ALHVNNDRTKVLLKPDKTTITEPHHIWPSLSDEDWIKVEVQLKDLILADYGKKNNVNVAS
LTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSN
YETATFSSKTEWRVRAISATNLHLRTNYIYVSSDDIKETGFTYILPKNVLKKFIIISDLR
TQISGYLYGISPSDNPQVKEIRCIVMPPQWGTHQMVHLPHKLPSHEFLNELEPLGWIHTQ
PNELPQLSPHDITTHATIMADNSSWTTDRTIVITCSFTPGSCSLQAYKLTPSGFEWGRNN
KDMGNNPKGYLPSHYEKVQMLLSDRFLGLFMTPLQGSWNYNFMGVRHDPNMKYDLQLASP
KEFYHEVHRPAHFLNFSSLDEADTAGADRDNALE
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atggcactgccgccatatttgataccgggaagcccctgggcctacatggcccagcagcag
gctcagcttgctgctgcccaggcccaggcggcacatgcccagatgcatgcccattttcaa
gctcaggcacaagcgcaggctcaagctcagtcaatcccacgttcacaagcgggcccaccc
ccagttgaaaatgtctctctcgagaaaatgcaagagaaggcacgcaggtggcagcaactt
cacaacaagaaatatgctgagaaaaggaagtttgggtttgttgatgtacagaaagaagaa
atgccacctgaacacattcgtaaaatcatcagagatcatggagacatgtccagtagaaag
tatcgtcacgacaaacgtgtataccttggtgcactgaagttcatgccccatgctgttctt
aaacttttggagaacatgcctatgccttgggaacagatcagagatgtgcaggtcctgtac
cacatcactggagctatcacattcgtaaatgaaattccttgggtcattgagccagtttat
atatctcagtggtccacaatgtggatgatgatgagaagagagaagagagacagacgtcac
ttcaagcgtatgaggttcccgccttttgatgatgaggaacccccgttagattttgctgac
aacgttttagatgttgagcctttggaagctatacaaatggatttagatccagaggaagat
gttgaggttgttgattggttctacgagcacaaaccactaattgacacgaagtatgttaat
ggcccaacatatcggaagtggcggctcacccttcctcagatggctacgttgtatcgtctg
gcaaatcagcttctgacagatgtgtcggacaacaactacttctacttgttcgatctgaaa
tctttctttacagcaaaggcattgaacatggctctaccaggtggtcctaaatttgaacct
ctgatcaaggacatgaacccagctgatgaagactggaatgagttcaatgacattaacaag
attatagtgcgacatcaagtcaggacagagtaccggattgctttcccttacctatacaat
aacatgcctcagtatgtccaccttagctggtatcacactcctgtcgttctttacatcaag
actgaggatcctgatcttccagcattctattttgaccccttgatcaatcccatctctcat
cgaaatactgtcaagagtgagactcttctgcctgatgatgatgaggactttgaattgcca
gatgatgttgagccattactgaaggagtggcaactatatgatgatgccacagcaaatgga
atagcacttctatggagcccgaggccatttaacatgcgttcaggaacaatgaggagggct
attgacgtcccacttgtgaagacttggtatcgtgagcactgcccacctggacagccagtg
aaggtaagggtgtcgtaccagaagctgttgaagtactttgttctcaatgctctaaagcac
cgtccacctaaagcacagaagaaacgcttcctgttccattcgttcaaagccaccaagttc
ttccagacaaccaccttagattgggttgaagtaggtctgcaagtatgtcgacagggttac
aacatgttgaacctcctaattcatcgcaagaacttgaactatctccatttggattataac
ttcaatcttaagccagtgaaaaccttgacaacaaaggagcgtaaaaagtcaagatttggt
aatgcattccatctgtgccgagaaattttgaggctaacaaagttagttgttgatgctcat
gtacagtatcggctgaacaatgtcgatgctttccagttagctgatggtttgcagtacata
tttgctcatgttggtcagcttactggtatgtataggtacaagtacaagcttatgagacag
atccgtatgtgtaaggatctcaagcatgttatctactatagattcaatactggacaggta
ggcaagggcccaggatgtggattttgggcaccaggctggcgagtttggctattcttcatg
agaggcataaccccactgctagaacgatggcttggtaatctcctgtctcgtcaatttgaa
ggtcgacacagcaaaggtgttgcaaagactgtcacaaaacagagggtagaatctcacttt
gatctggaactaagagcttctgtcatgcatgacattctggacatgatgcctgaaggcatt
aagcagaataaagcccgcaccatcctgcagcatttatcagaggcttggagatgctggaaa
gctaacattccatggaaggttcctggtttgccaactcccattgagaatatgattctgcgt
tatgtgaaaatgaaagctgattggtggacaaacactgctcactataatcgggaacgtata
cgtcgtggtgcaacagtagacaagactgtttgcaagaagaatatgggccgcctcactcgt
ttgtacttgaagagtgagcaggaaaggcaacataactaccagaaggatggtccatacatc
agtcccgaagaggctgtggccatttacaccacaacagttcattggctggaatctcgtcgt
tttgctcccataccttttccaccactttcatataagcatgatacaaagctgctgatattg
gctcttgagagattgaaagaagcctacagtgtgaagtcccgtctgaatcagtctcaacgt
gaggagcttgggctcattgagcaggcatatgataaccctcatgaggctctctcccgtatc
aaacgtcacttgcttacacaaagagctttcaaggaagttggaattgaattcatggatctg
tatagtcatttgattcctgtgtatgatgtggagcctctggagaagataacagatgcttac
cttgaccagtacttgtggtatgaagctgacaaacgtcgcctgtttccaccatgggtgaaa
cctggagactctgaaccaccacctctccttgtgtacaaatggtgtcagggtatcaacaac
ttgacagatgtgtgggatactgctgatggtgaatgcaatgtaatgctggagtctaagtat
gaaaagctctatgagaagatagatttgaccctgttgaatagattgctccgacttattgta
gatcacaatattgctgattacatgactgcaaagaacaatgttgacatcaattacaaggac
atgaaccatacaaatcgttatggcattattagaggcctacagtttgcatcctttattgta
cagtattacggacttgtcatggacttgctagtgctgggtctaaagcgttcagcagatatg
gctggacctccacagatgcccaatgatttcttgaacttccaaaatgtggccacagaaact
cagcatccaatccgtctctattcaaggtatattgatagaattcatattttctttagattt
actgctgaagaagccaaggacctcattcagcgatacctcacagagcacccagatcctaat
aatgaaaacattgtggggtacaacaacaagaagtgctggcctagagatgcaagaatgagg
cttatgaagcatgatgtaaatttgggacgtgctgttttctgggatataaaaaatcgtttg
cctcgatcagtgaccactatcaattgggagaattcatttgcttcagtatattctaaagat
aatccaaacttgctcttcaacatggctgggtttgagtgccgtatcttgccaaaatgtcgt
atgacacatgaagagttcaagcacagagacggtgtatggaatcttcagaatgaagtcaca
aaggaacgaacatctcagtgcttcttgagagtagatgacgagtccatgcaaaggttccac
aaccgtgtaagacaaattctcatggcatctggctctaccacattcacaaaaattgtaaat
aaatggaatactgccttgattggattaatgacttattatagagagtctgttgtaaacacc
caagaacttttggacctgttagtgaaatgtgaaaataagatccaaactcgaatcaaaatt
ggcctgaactctaaaatgccttcaagatttccacctgttgtattctacacacctaaagaa
cttggtggccttggtatgctttccatgggtcatgtacttattccacagtcagatttacga
tggagtaagcagactgatgttggtatcacacatttccgctctggtatgagtcacgatgaa
gatcagttgattcctaacctgtacagatacattcagccttgggaaacagagtttttggat
tcacaaagagtttgggcagaatatgccttaaaaagacaagaagcaacagctcagaaccgt
agattgacacttgaagatcttgaggattcttgggatcgaggtattccaaggataaacaca
ctcttccagaaggatcgtcacacacttgcgtatgataaaggctggagaatacgtacagaa
ttcaagcagttccaggtacttaaacagaatccattttggtggacgcaccagagacatgat
ggtaaactgtggaacttgaataactaccgaacagatatgattcaagctttaggtggtgtg
gaaggaattttggagcacacacttttcaaagggacatatttccctacatgggagggtctg
ttttgggagaaagcttcaggttttgaagaaagtatgaagtataaaaagttgaccaatgca
cagagatctggtctaaaccagattcccaaccgacgtttcactctttggtggtcacctacc
attaatcgagcaaatgtgtatgtaggtttccaggtacaacttgacttgacaggtattttc
atgcatggcaaaattcccaccctcaagatttcccttattcagattttccgagctcacttg
tggcagaagattcacgaatctgttgtgatggacttgtgtcaagtgtttgatcaagagctt
gatgcattggaaattgaaactgtccagaaggaaactattcatcccagaaaatcatacaag
atgaattcttcttgtgctgatattctcctttttgctgcttacaagtggaattattccaaa
ccttcccttttagccgactccaaagacactatggatggttctacaacacagaaatattgg
attgacgtgcagctgaggtggggtgattatgactcccatgatgtggaacgctatgcaaga
gccaagttcttagattacaccactgataatatgtctctgtatccttctcccactggtgtg
ttaattgctattgacttagcatacaatcttcacagtgcatatggaaactggttccctggt
gcaaagcctctgatacagcaggctatggcaaaaatcatgaaagcaaatcctgccttatat
gtgttgcgagaacgtatccgcaaaggtctccaactgtactcctcagagcccactgagccc
tacttgtcttcacagaactatggtgaacttttctcaaatcaaattatttggtttgtagat
gacactaatgtgtacagggttacaatccataagacatttgaaggaaacttaacaaccaaa
cccatcaatggagctatcttcattttcaatcccagaacaggccagctgtttttgaagatc
attcatacgtctgtatgggcaggtcagaaacgtcttggtcagctagctaagtggaaaact
gcagaagaagttgctgctttaattcgatccttacctgtagaagaacagcccaagcagatt
attgtaactcgaaagggtatgttggatccacttgaggtgcacttgttggatttccctaac
attgtgatcaagggctctgaattgcagttgcctttccaggcatgtttgaaggtagagaag
tttggcgatttgattcttaaagctacagagccgcagatggtactcttcaatttatatgat
gactggttgaagaatatttcatcctatactgcattctcaaggttgattttgatactaagg
gcgcttcatgtaaataatgacagaacaaaggttcttctgaagcctgacaaaactacaatc
acagaacctcaccacatttggccgtcactgtctgatgaagactggataaaagttgaagtg
caattgaaagatctcattttggcagattatggtaaaaagaacaatgtcaatgttgcatca
ctcactcagtctgaaatcagggatatcattttaggtatggaaattagtgctccttcagca
cagaggcaacaaattgctgaaattgagaaacagactaaagagcagtcacagctgacagca
accaccaccagaaccgttaacaaacatggtgatgaaatcatcacctctaccacttctaac
tatgaaacggctacatttagcagtaaaacagaatggagagttcgagccatatctgcaacc
aacctccacctgcgtaccaattacatttatgtatcctctgatgacattaaggagacgggt
ttcacatacattctccctaagaatgttctaaagaagtttatcatcatatctgatctcaga
acacaaatttcagggtacctttatggtattagcccatcagataatccacaagtaaaagag
atccgttgtattgttatgccacctcagtggggaacacatcaaatggtacacttacctcac
aaattaccctctcatgagtttttgaatgaattggaacccttgggttggatccacacccag
cctaatgaactgccacagctttctccacatgacatcacaactcatgcaactatcatggct
gataatagttcttggactacagatcgcaccattgttatcacatgttcgtttactccaggt
tcgtgttccctgcaagcatacaaactcacaccatcaggctttgagtggggtcgtaacaac
aaagacatgggtaataatcctaaaggttaccttccctctcattatgaaaaagttcaaatg
ttgctgtccgaccgattcttagggctgtttatgactccactacaaggctcctggaattac
aacttcatgggggtgcgtcatgatcccaacatgaagtatgacttgcaattagccagccct
aaggagttctatcacgaggtccatcgacctgctcacttcttgaatttctcctccttagat
gaagcagacactgcaggggcagacagagacaatgccctggagtaa
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integrated database retrieval system
