Macrobrachium rosenbergii (giant freshwater prawn): 136831441
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Entry
136831441 CDS
T10429
Symbol
alphaCOP
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mrj04131
]
136831441 (alphaCOP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mrj04147
]
136831441 (alphaCOP)
Membrane trafficking [BR:
mrj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
136831441 (alphaCOP)
Exosome [BR:
mrj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
136831441 (alphaCOP)
Exosomal proteins of bladder cancer cells
136831441 (alphaCOP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
WD40_Gbeta
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_RIG_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
136831441
NCBI-ProteinID:
XP_066948012
LinkDB
All DBs
Position
4:27116874..27183927
Genome browser
AA seq
1226 aa
AA seq
DB search
MLTKFETKSARVKGLSFHSKRPWVLASLHSGIIQLWDYRMCTLVDKFDEHEGPVRAVCFH
QQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTEFHQEYPWILSASDDQTIRIW
NWQSRSCVSILTGHNHYVMCARFHPTQDLIVSASLDSTVRVWDIAGIPGKPGGLRKKNVA
PGMGGLGGGEDHHTRNPELFSAGDATVRHVLEGHDRGVNWAAFHPTLPLVISGSDDRQVK
LWRMNESKAWEVDTCRGHYNNVSCVMFHPRQELILSNSEDKSIRVWDMAKRMCLHTFRRE
HDRFWVLAAHPTLNLFAAGHDSGMIIFKLERERPAYALHGNLLYYVKERFLRRLDLTKNK
DVAVMQLRAGPRAPVYSMSFNPAENAVLLTTRTHILDNSNYDLYQVPKESDSQNPDAPDS
KRSAGLTAVWVARNRFAVMDKSHQIVIKNLQNEVTKKVSTPDCDEIFYAGTGMLLLRDVD
GVSLFDVQQKRVLGTARIAKCRYVVWSANMTTVALLSKHTILICNRKLERLCSITETNRV
KSGSWDDSGVFIYTTSNHIKYALTNGDHGIIRTLELPVYVTRVAGSSVYCLDRQVTPRVL
TIDSTEFRFKLALVQRKYDEVLQMVRGAKLVGQSIIAYLQKKGYPEVALHFVKDERTRFI
LALECGNIDVALEAAKALDDKGCWEKLAEHALLHGNHPVVEYCYQQTKNYDKLSFLYLIT
GNIAKLRRMMKINEIRKDYEGWYTNALYLGDVPERIRVLKACGKTSLALLTASTHGYQQE
TESLAAHVEAGSIPEPLPSAQLLQPPIPVQPMDTAWPLLTVAKGFFDTAVASGKTASGTA
AAMAVDDVGDIAGDGWGDDDEENVEDGELQAEGGDGEGGGWEVDDDLDLPPELEGTSSAA
AGSGEDGYYVPPPRGHPPTHGWTQRSQLAIDHVLAGAFESATRLLHDQVGVVNFEPYRDL
FLSSFAHSRTSYPGAPALPSLSGYPARNWRTAQLKDQLPAVGMRLSNLMDRLKEASQLTT
AAKFSEAVDKLRAILLAVPLIVVDTKQEVTEAQNLLRVCKEYVLGITMELHRKTLGKTAP
DDLKRSLELAAYFTHCELQPGHQILTLRTAVNLAFKMKNYKMAMSFGRRLLNLGPRPEVA
QNIRKVVQACEKNPADELAVQYDEHNPFTMCASSYVPIYRGKPEVQCPLCGASYLPEHKG
ITCTICCVAQVGKDCIGLRISPLQFR
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgttgacaaaatttgaaacgaaaagtgcaagggttaaaggactgtcttttcattctaaa
cggccatgggtactggcaagcttgcacagtggtattattcaactatgggattatcgtatg
tgtaccctggtcgataaatttgatgaacatgaagggccagtacgtgcagtatgcttccat
cagcagcagccattatttgtatcagggggtgatgactacaaaatcaaggtttggaattac
aagctcaggagatgcctttttaccctcctcggtcacctggattacataaggacaactgaa
ttccatcaggaatacccatggatcctgtctgcttcagacgaccagacaatccgcatatgg
aattggcagtctcgttcctgtgtgtctatcttgacaggacacaaccattatgtgatgtgt
gcccgtttccatccaacgcaggatcttatagtatctgcttcacttgactcaactgttcgc
gtctgggatatcgcaggtattcccggcaagccaggaggtttacgaaagaagaatgtagct
ccaggaatgggagggttaggtggtggagaggatcaccacacccgtaacccagaactgttc
agtgctggagatgctactgttcgtcatgtgcttgaaggccacgaccgaggagttaattgg
gccgcattccatcccactctgcctcttgtaatatcagggtctgatgaccgtcaggttaaa
ctttggagaatgaatgaatcgaaggcttgggaagtggacacttgccgaggtcattacaat
aatgtgtcatgtgtgatgttccatcctcgacaagaattaattctctcaaactctgaggac
aaatccattcgagtctgggacatggccaaaaggatgtgcctccatacattccgccgagag
catgacaggttctgggtattagcagcccacccaaccctcaacctgtttgctgctggccat
gacagtggcatgattatattcaagctagagcgtgagaggcctgcatatgccttgcatgga
aatcttttatattatgtgaaggaaagattcctacgtcgtctagatctgactaagaacaag
gatgtagcagtgatgcagcttagagcaggtccacgagctccagtgtacagtatgtccttc
aaccctgcagaaaatgctgtccttctcaccactcgaactcacatcctggacaacagcaat
tatgatttatatcaagtacccaaggaatcagattcacagaatcctgatgccccagattcc
aaacgttcggctggtctaactgctgtgtgggttgcaagaaacagatttgctgtcatggat
aagagtcatcagattgtcatcaagaaccttcagaatgaagttacaaagaaggtgtccact
cctgattgtgatgagatattttatgctggaactggcatgctgcttctaagagatgttgat
ggagtttcattgtttgatgttcagcagaaaagagttcttggtacagcacgaatagcaaaa
tgccgatatgttgtgtggtctgccaacatgaccacagtagccttgctttcaaagcacacc
attcttatctgtaatcggaagttggagaggctttgctcgatcacagaaactaacagagta
aagtcagggtcttgggatgatagtggtgtctttatctacacaacaagcaatcacattaag
tatgccctaaccaatggtgaccatggcattatccgtacccttgaactacctgtgtatgta
acaagagttgctgggagctctgtgtattgtcttgatcgccaagttacaccaagagttctc
accattgactccacagagtttcgatttaagttggctctggtgcaacgtaaatatgatgag
gtgttgcaaatggtcagaggagccaaacttgttggtcagtccattattgcatacctgcag
aagaagggttacccagaagtagctctccactttgtgaaggatgagcgtacccggttcatt
ttggcacttgagtgtggcaatattgacgttgcacttgaagcagccaaagctctggatgac
aaaggttgctgggagaagcttgctgaacatgctctcttacacggcaatcatcctgttgtt
gaatactgctatcagcagacaaagaattatgacaagttgtccttcctgtacctgataact
ggtaatatcgcgaaacttcgaagaatgatgaaaatcaatgagatccgcaaagattatgaa
ggatggtacacaaatgctctctacttgggtgatgtacctgaaaggatcagagtcttgaaa
gcatgtggtaaaacatctttggctttacttactgcttccacacatggttaccaacaggaa
actgaatctcttgcagcccatgttgaagctggaagtatcccagagcctttaccaagtgct
cagttactgcagcctccaattcctgtacagcctatggatacagcttggcctctcctgaca
gtggctaaaggattcttcgacacagctgtggcaagtggcaagacagcttctggaactgct
gcagcaatggctgtggatgatgttggtgatatagctggagatggatggggtgatgatgac
gaggagaatgtagaggatggggaactacaagctgaaggtggtgatggtgaaggtggtgga
tgggaagtcgacgatgaccttgacctgcctccagaactggaaggcacttcttctgctgca
gcaggttctggagaagatgggtattatgtgccacctcctcgaggtcatcctcctactcat
ggatggacccagcgcagccagcttgctattgatcacgttcttgctggagcctttgagtct
gcaactagattgctacatgatcaggttggcgttgtgaactttgaaccctacagagatttg
ttcctctcatcattcgctcattctcgcacaagctaccctggtgcacctgcacttccatct
ctgtctggctaccctgcccgtaactggagaacagcgcaacttaaagatcagcttccagca
gttgggatgcgtctctctaaccttatggacagactgaaggaagcatcacagttgaccaca
gctgcgaagttctcagaagctgttgacaaattaagagcaatcctcttggctgttcccctt
attgttgttgacacaaaacaagaggtaactgaggcacagaacttgcttcgagtatgcaaa
gagtatgtattaggaatcaccatggaacttcacaggaagactttgggaaagactgcacca
gatgatctcaagagatctctggaactagcagcctacttcactcactgtgaacttcagcct
ggccaccaaatccttactctcagaacagccgttaacttggccttcaaaatgaagaattac
aagatggccatgagttttggtcgtcgccttctaaaccttggcccaagaccagaagttgcc
cagaatattaggaaggtcgttcaggcatgtgaaaagaacccagctgatgaattggcagtc
cagtatgatgaacataatcctttcacaatgtgtgccagctcttatgtgccaatataccga
gggaaaccggaagtacagtgtcctttgtgtggagcctcatatcttccagagcacaagggt
atcacatgtaccatctgctgtgtggcacaagttggcaaagattgcattgggcttcgtata
tcacccttacagtttcgatga
DBGET
integrated database retrieval system
