Macrobrachium rosenbergii (giant freshwater prawn): 136832020
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Entry
136832020 CDS
T10429
Symbol
Wdr33
Name
(RefSeq) uncharacterized protein Wdr33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136832020 (Wdr33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrj03019
]
136832020 (Wdr33)
Messenger RNA biogenesis [BR:
mrj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
136832020 (Wdr33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WDR55
Beta-prop_IFT140_1st
ANAPC4_WD40
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_EIPR1
WD40_RFWD3
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR41
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_RIG_1st
Tricorn_2nd
PEP5_VPS11_N
Beta-prop_WDR11_2nd
PROPPIN
CFAP43_N
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
136832020
NCBI-ProteinID:
XP_066948613
LinkDB
All DBs
Position
4:30391629..30538829
Genome browser
AA seq
944 aa
AA seq
DB search
MIQVDMFNTPPPPIPQGKPPPPMQGGPQPFQALSFKPFKAPDGEFDGKRLRKSVMRKTVD
YNSSVVNMLESRVWQRDERDRGQLQADVCYASEMLPPPAYPVNPINAVVTKFVRTSTNKA
KCPIFCLAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSSVRTMVWSHNDQWMVT
GDTGGFVKYWQTNMNNVKLFQAHKDPVRGLSFSPSDQKFATGSDDGTVRIWDFYRCYEEK
ILRGHGADVKCVDWHPSKSLLASGSKDNQQPIKLWDPRSGQPLAKLHAHKSTVMDLKWNA
NGNWLCSASRDHLLKLFDIRNLSTEFQVFRGHKKEASCIAWHPHHEGLFASGGSDGSILF
WHVGNDKEVGAIESAHDGIIWDLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDKYNLN
TLPAGLADDSMDIDDIPVTSNIETQGAIPGMGPDDKVEEADSSAPETIPGLDFENTGFDS
RFTKKTPYAKPIPKTFQAAWNAAGGLEEEIEEDNNITSWVITDSNELFCLPANIDGDYVY
TDEGDELPPGSVPLEDIKANSILYSGFLIPLEFVSGDVIWKAFTTMEEEDFISEITKDPE
FAKKLIKEKHMLLNPNASMEDPVPEKRPNTFETNNQTFTGPQNIMNTSNNMASNNNVNVN
VNNNSGNFQNQGNYHDGPPPNFGNNNYSGGSRNFNNHPRGNFRGHNDRGYNRGGPRGNWQ
PRGGGSRNDHGPGMGGPRYNEESYEENYDNDWGYNDQGDPDNGISSEDVRMSYDEKGRGR
GRGRGRGRGRGGFKDFSNKYDDGEGDGRSNQWHPRGGQDEDYEDERDRGGDWNQDNNYSW
GRKGNYNNYNNNNKMSNQNSGWNNEDGGYESRHNSWRGRGRGFKGDYQRGEISNATEVEV
APSGVEVEVKEVAGIISVFYLSSVISSLNMVFRFVYSFFLKVYM
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgattcaagtggacatgtttaacacgcccccacccccaatcccacagggaaagcctcct
cctcccatgcagggtggacctcagccattccaagcattatcgttcaagccctttaaagct
ccagatggagaatttgatggaaagagactcagaaaaagtgttatgcgaaagactgttgat
tataattcctctgtcgtaaacatgttagaaagtcgtgtgtggcaacgtgatgagcgtgat
cgtggccagttgcaggctgatgtttgctatgcctctgagatgcttcctccccctgcatat
ccggttaatccaataaatgctgttgtaactaagtttgttcgtacctccactaataaagct
aagtgtccaatattctgcttggcatggacaccagaagggaggagacttgtaacaggggct
tcctctggggaattcactctttggaatggattgaccttcaattttgaaacaattctacaa
gctcatgacagtagtgtgagaacgatggtgtggtcccacaacgatcaatggatggtaact
ggagatactggtggctttgttaaatattggcagacgaacatgaataatgtgaagctgttc
caagcacataaggacccagtgcgtggcctcagtttttccccgagtgaccagaagtttgcc
accggttctgatgatgggaccgttagaatatgggacttttaccgttgttatgaagaaaaa
attcttagaggtcacggagccgatgtcaaatgtgttgactggcatccatcaaaaagcctt
ctagcatcaggtagtaaagacaaccaacagcccattaagttgtgggacccaagatcaggg
cagccactggcaaaactacatgcacacaaaagcacagtaatggaccttaagtggaatgca
aatggcaattggttgtgttctgcgtctagagaccatttgttgaagctttttgacataaga
aatctttcaacagagttccaggtattcagaggtcacaagaaagaggcttcttgcatagca
tggcatccacatcatgagggcttatttgcaagtggtggttcagatggatcaatcctcttc
tggcatgtaggaaatgacaaggaagtaggagccattgaatctgctcatgatggtattata
tgggacttagcatggcatcctcttggtcacattctgtgctcagggtccaatgaccataca
tcaaagttctggacgagaaatcgacctggggacaagatgagagacaagtacaacttaaat
actcttccagcagggttagctgatgactccatggatatcgatgatattccagttacctcc
aatattgaaacacaaggtgctattcctggcatgggcccagacgacaaagttgaggaagct
gattctagtgcaccagaaacgatacctggtctagactttgagaacactggctttgacagt
agatttacaaaaaagactccatatgccaagcctatcccaaagactttccaagctgcatgg
aatgccgctggtggcttagaagaggaaattgaagaggacaataacattacgagctgggtt
ataaccgacagcaatgaattattttgtctacctgcaaacatcgatggtgattatgtttat
accgatgaaggagatgagttgcctccagggtctgtgcctttggaagacattaaggctaat
tccattctttactctggtttcctgattcctcttgaatttgtatcaggtgatgttatatgg
aaagcctttacaacaatggaagaggaggattttatttcagagattaccaaggatccagaa
tttgcaaagaaacttattaaagaaaaacacatgctgcttaatccaaatgctagtatggaa
gatccagtacctgagaagaggccaaatacttttgaaacaaacaatcaaactttcactggt
ccccagaatattatgaacaccagcaataatatggctagtaataacaatgtgaatgtcaat
gttaataacaacagtggtaacttccagaatcaaggtaattatcatgacgggccaccacca
aattttggaaacaacaactattctggtggctcacggaacttcaataaccacccaagagga
aacttcagaggtcataatgacaggggttataatcgaggaggcccaaggggtaattggcag
ccaaggggcggaggttccaggaatgatcatgggcctggaatgggtggaccaagatataat
gaagaatcatatgaggagaactatgacaatgactggggttacaatgaccagggtgatcct
gataatggtataagcagtgaagatgtccggatgagttacgatgagaaaggacgaggccga
ggcagaggcagaggtagaggtagaggcagaggtggttttaaagacttcagtaacaaatat
gatgatggtgagggagatggcagatcaaaccagtggcatccaagaggaggccaagatgag
gactatgaagatgagagagacaggggtggtgactggaatcaagataataattactcttgg
ggaaggaaaggaaattataacaactacaataacaacaacaagatgagtaatcaaaacagt
ggttggaacaatgaggacggtggttacgagagtcgtcataactcttggaggggaagagga
agaggcttcaagggagattatcaaagaggggagatttccaacgcaacagaagtagaggtg
gccccgtcaggggtagaggtagaggtgaaggaagtggctgggattattagtgtattttat
ttaagctccgtcatcagttcattaaatatggtgttcaggtttgtttatagtttctttttg
aaagtgtatatgtga
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