Macrobrachium rosenbergii (giant freshwater prawn): 136832450
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Entry
136832450 CDS
T10429
Name
(RefSeq) general transcription factor IIF subunit 1-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136832450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrj03021
]
136832450
Transcription machinery [BR:
mrj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
136832450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
136832450
NCBI-ProteinID:
XP_066949426
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All DBs
Position
49:complement(43953539..43966048)
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AA seq
480 aa
AA seq
DB search
MSGFNSTFQGNVSSYVVKAPRTSTKRFSVMRFDSSHGIDFKSWTRAKMERENNWKLYRTM
EGDAPRYGGGSEFRQEEKAEARRKRLGIRLKQYRQEDQPWILTVSGKKEKKYKGSRAGGV
SENSSWYIFMQGKDGAFEAYPVEEWYCYRPVQHYRSLTEEEAEKHFERRSKIMNYFSLMK
KETAAPDGEEDPAMHKNRSFLGNRLVLSEIDDWMSESESGDEAEEENGEEDGDKKKKKYK
VQSKGRKQQGGKKQKKADGESEEEDCVEESDEYDDGAEHDYISSDSSDSEAEDDEVVRRE
LAGVDEADGLRKLINSEEDDDEEQRDGEDSAEDAKDTDKRKKRDPEGKISEDSDEGAEIR
LRKTGMGALVGKMGMSQNRNTKRRTKRELKKEIRTKYVDAVATPMASGSRSIDNSSVSED
TIRRYLMRKPMTTTELLQKFKVKKTGMDPDHLVHSIAQILKKINPVKRVVKGKMYLSMNH
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtctggattcaacagtacgttccagggaaatgtgtcttcatacgtcgtaaaagctcct
aggacctccacgaagagattttctgtgatgaggtttgactcctcccacgggatagacttc
aagtcctggacgcgggcgaagatggagagggagaacaactggaaactctatcgaactatg
gaaggggatgcaccgaggtacggtggtggatccgagtttcgccaggaggagaaggcggag
gcgagaaggaaaaggttgggaatacgtctgaagcagtaccgtcaagaggaccagccttgg
attttaacggtatctggcaagaaggagaaaaagtacaagggaagtcgagcaggcggcgtg
tctgaaaactcttcctggtacatcttcatgcaggggaaagacggtgcatttgaggcctac
ccagtcgaggagtggtactgttacaggcctgttcagcattacagatccctaacggaagaa
gaagccgaaaagcattttgagagacgttcgaaaatcatgaactacttttccctcatgaag
aaagagaccgctgctcccgacggggaggaagacccagccatgcacaagaacaggagtttc
ctaggaaatcgcctggttctgtccgaaatagacgactggatgtctgaatcagagtcggga
gacgaggctgaagaagagaatggcgaggaagacggggacaagaagaaaaagaagtacaaa
gtgcagtccaaaggcaggaaacaacaaggtgggaagaagcagaagaaagccgacggcgaa
agtgaggaagaagactgcgtcgaagaaagtgacgaatacgacgacggcgccgaacatgat
tacatttccagtgactcctcagactctgaagcagaagacgacgaagtggtaaggagagaa
ctggcgggcgttgatgaggctgacggcctcaggaagctcatcaattctgaggaagacgat
gacgaggaacaaagggacggcgaggattctgccgaggacgccaaggacaccgacaagaga
aagaagcgagatcctgagggcaagatttccgaggacagcgacgagggagcagaaatcagg
ctgaggaagactggaatgggtgccctcgttggtaagatgggcatgtcccaaaaccgaaat
accaagaggaggaccaaaagagaattgaaaaaggaaatccgaaccaaatatgtcgatgca
gtggctacgccgatggcgtctggttcaaggagcatcgacaacagcagcgtgtcagaggac
accatcaggaggtatttgatgcgcaagccgatgaccacgacggaactcctgcagaagttc
aaggtaaagaaaacgggaatggacccggaccatctggtccattccatcgctcagatcctg
aagaagatcaacccggtcaaacgggtggtgaaagggaagatgtatttgtctatgaatcat
tag
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