Macrobrachium rosenbergii (giant freshwater prawn): 136832644
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Entry
136832644 CDS
T10429
Symbol
Sym
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03015
mRNA surveillance pathway
Brite
Transcription machinery [BR:
mrj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
136832644 (Sym)
Messenger RNA biogenesis [BR:
mrj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
136832644 (Sym)
U7-dependent histone pre-mRNA processing factors
136832644 (Sym)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
DNA_pol_phi
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
136832644
NCBI-ProteinID:
XP_066950012
LinkDB
All DBs
Position
50:complement(13395786..13412991)
Genome browser
AA seq
1083 aa
AA seq
DB search
MTETEPTTRERVVELLNTATFLTSEKEKIANLAKVQELIIHLDQKLLDSFFEEVAAFQTD
RNSDVRKFVVGFIEEACKKDVAMLPRLVPNIQILLADSAIAVVKRVIQAAAQLHRATLAW
LSSARTTTPEMEQVWHIITLIKNSIISMIDHDNDGVRTQAIKFLESLVLLQTYKEADSVT
REGEFNLDLVPLTLKAARPRKLEEEARMVLNKLISFQGSLHISSVNLMTCMSSLTIIARA
RPQFLAKIINALEILHANLPPTLTKSQVNSVRKHLKIQMLNLLKHPASYDHHENITTVLN
DLGVTAAEVNKSMPSKDQIRKRVRRDKSTDEGGEPTSKKSRIDKDEKKESKEVTEKQSAI
DITQRWLVDELTTETVASLVMVNMLNLPEEMPPLFSAAYTPITAAGSHSQIQHMARLLAS
QLTAAGLGPGAEQVKEDEVETGHDSDEEGNIRRLVSGYTDEAHVQPAGPVLTPAGVIGRP
MRQKVRTMKLAEVTKPLPSPANNKMQLVLLRRLLQCDKMLLQGSTPKVRMRIVSVLSGCL
SPQECEELEDFILDDMANHVELMLSWLYAEYSVSHEFSKVHSILHSHSKPGTKKEKSYTQ
IFTSIISKAIAKRVNKETEEFFLRLFLESPVVPEESVTSLIALGRCAGDTILTNDLYGPT
VRILKDIILWRPPISKPAIRALCLLASHDQEQVREQVIPVILELCKDDESIQEAVAQVAT
NYLKYLLLESPPEVLCLHELGRPNKEVEWAETSVKACLFLYLALLPMNQELIYELAQVYV
KTVNEAKRAILRMLEGPIQHMGMNSPHLLKLVETCPKGGETLITRIIHILTEKAPPSEAL
VCRVRELYNRRVSDVRFLIPVLTGLSKKEVIAVLPKLIKLNPHVVKEVFNRLWGVTLDTG
TSPLTPVDLLVALHLIDNEKCDVKTVIKATGLCFAERNIYTAEVLAFVLQQLMEQPNLPT
LFMRTVIQTLTHYPKLLGFIMNILQRLIAKQVWKQKKVWEGFIKCCQRATPQSYTVLLQL
PAEQLSDVFSSAPELRTQLGQHLSTLTDNQRAHIPVSLLDVIEENSNGASEMTSEPPPPG
IKD
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaactgaacctacaacccgtgaaagggttgtagaactgttgaacacagctact
tttttgacatctgagaaggagaagattgcgaatttagccaaggtgcaagagcttataatt
caccttgatcaaaaacttctggactccttttttgaagaagtcgccgcttttcagactgac
cgcaactcggatgttcgaaaatttgttgttgggttcattgaagaagcatgcaaaaaagat
gttgctatgttgcccagattggtgcccaacatacagatcctactggcagacagtgccatt
gctgtagtgaagcgcgtgattcaagcagcagcgcaactgcaccgggcaaccctcgcttgg
ctgtcgtcagcgcgaaccacaactccagagatggagcaggtgtggcatatcattacactg
attaagaactccataatctctatgattgatcatgataatgatggcgttagaactcaggcc
atcaagtttctcgaatcactggttttactgcagacatacaaagaggcagattctgttacc
agggaaggagagttcaacttggatcttgtgcccctaacactaaaggctgctcgtcctagg
aagctggaagaagaagctagaatggtacttaataagctcatctcattccaaggatcccta
catatcagcagtgtaaatttaatgacgtgcatgtcttctctgacaatcattgctcgagcc
cgtcctcagtttctcgccaaaatcatcaatgccttggagattttacatgctaaccttcca
cccactttgactaagtcccaggtgaacagcgttagaaaacatttgaagatacaaatgctg
aatcttctgaaacatccagcatcttatgatcaccatgaaaatatcacgactgttctgaat
gaccttggtgtcacagcagcagaggttaacaagagcatgccatcgaaggaccagatacgc
aagagagtgagaagagacaagtcgaccgatgagggaggagaacccacgagcaaaaaatct
cgcatcgacaaagatgaaaagaaagagtccaaggaggttactgaaaagcagtctgctata
gacatcacgcaacgctggctggtagacgagttgacaactgaaacagtcgcatccctcgtc
atggttaatatgttgaatcttccagaggaaatgccgccactttttagcgcagcttacaca
ccgattaccgctgctggatcacattcgcagatccaacatatggctagacttctggcctcc
cagttaactgcagctgggctaggccctggagcagaacaagtaaaagaagatgaggtagaa
actggtcatgacagtgacgaagagggcaacataaggaggttggtgtctggatatacagat
gaggcacatgtgcagccagcaggaccagtcctcacccctgctggagttataggaaggcca
atgaggcagaaagtccgaacaatgaaattggcagaggtcaccaaaccattaccgtcccct
gcaaacaacaaaatgcagctggttctcttgcgccgtctgctccaatgcgacaagatgctg
ttgcaggggagcacgccaaaggtgcgcatgcgtatcgtgtccgtactctcaggatgcctc
tcgccccaggaatgtgaagagttagaggacttcatccttgatgacatggctaaccacgtg
gagctcatgttgtcatggttatatgcagaatattctgtctcccacgagttctccaaagtc
cacagcattcttcacagccacagcaaaccaggcacaaagaaggaaaagagctacacccag
atattcacaagcatcatatcgaaggccattgctaaaagagtcaataaagaaacggaagag
tttttccttcgtctcttcctggaaagtccagtggtgcctgaagaatccgtcacgtccctt
attgctttgggaagatgtgcaggagatacaattctaactaatgatttatatggacctaca
gtaaggatattaaaagacataatactttggagacccccaatatcaaaaccagcaattaga
gcactttgcctgttggcatcacatgatcaagaacaggtcagagaacaggtcataccagtt
atcctggaactgtgcaaggatgacgaaagcatacaggaggcagtggcacaggttgccaca
aattacttgaaatatcttctgttggaaagccctcctgaagtcctctgcctgcatgagtta
ggacgcccaaacaaggaagtagagtgggccgagacatccgtcaaggcctgcttattcttg
tacctggcattgttacccatgaatcaagaacttatttatgagttagcacaagtttacgtc
aagacagtgaacgaagccaagagggccatattgagaatgttggaagggcccatccaacac
atgggaatgaactcgccacatttgctcaagcttgttgaaacgtgcccaaagggaggagaa
acacttatcacaaggattattcatatactcactgaaaaggctccacccagtgaagccctt
gtgtgtcgtgtcagagaactgtacaaccgtcgtgtatcagacgtacgattcctcatccct
gtcttgacaggacttagcaaaaaggaagttattgctgtattaccaaaactgattaaactg
aatccacatgtcgtaaaagaggtgttcaacagattatggggagtgactttagacactgga
acttctccactaactcctgtggatttattagtggcccttcatctaattgataatgaaaag
tgtgatgtcaagactgtaattaaagctactggcttgtgttttgccgaacgtaacatttac
acggctgaggtactggctttcgtactccagcagctgatggaacagccaaatttaccaact
ctcttcatgaggacagtgattcagactcttactcattatcccaaactcttaggattcatc
atgaatattcttcagagacttattgcaaaacaggtttggaaacagaagaaagtctgggaa
ggtttcatcaagtgctgccaacgtgctacaccccagagttacaccgttctcctccagctc
ccagctgaacaactttcagatgtattcagcagtgcgccagagctgcgcacacagctggga
caacacctttctacattaactgataatcagcgagcacacatccccgtaagcctcttagat
gtaattgaagagaattccaatggtgcatcagaaatgacctcagagccaccaccaccagga
ataaaggattga
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integrated database retrieval system
