Macrobrachium rosenbergii (giant freshwater prawn): 136833129
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Entry
136833129 CDS
T10429
Name
(RefSeq) transcription factor Sox-2-like isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mrj03000
]
136833129
Transcription factors [BR:
mrj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
136833129
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Vir1p
Motif
Other DBs
NCBI-GeneID:
136833129
NCBI-ProteinID:
XP_066950888
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Position
51:complement(8415106..8462143)
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AA seq
455 aa
AA seq
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MLTLDPPDLKGGSLHSPHLPPHSSHSHSVPHTVSHAHHNSHSHTYSLSHPSSLTSLNSSL
TSSLSTPSLASVGSMSAHSPPQTHVPTPTNNNNSSTNNNNNGSTNNSSSNSSSNNKSNAS
ASSSAAERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFID
EAKRLRAVHMKEHPDYKYRPRRKTKTLMKKDKYPLASGLLPSDPTRPPVQQVTRDMYNMT
NGYMPNGDYGDYGEWRYGYDGYGASQGYPYMTSQVYSGYDMTRGYSPTSSSTPSYMNGSY
SSAAMYASAPSPYSMSQILRLKSATPPPLQMASMASGVGSVGSVGSSASHSPTPIKSETP
TLPVSSPGATMPPSASHTTASDYQSAVMKREYGSGQPGQQDLSQMISMYLPGSQERHEQQ
KAAAAAAYMSHAHYHAHAAASPEQMPPAPMPLAHM
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccctcgacccgccagacctcaaagggggtagtttgcattccccacacctgccc
cctcattcttcccattcccattcagttccccataccgtctcccatgcccatcacaattcc
cattcccacacgtattccctgtctcatccttcctccttgacttcgctcaattcctcgctc
acctcctcactgtcgaccccttccctggcgtccgtcgggagcatgagcgcccattcgcct
ccccaaacacacgtgcccactcccaccaacaacaacaatagctccaccaataacaacaac
aacggctccaccaacaacagctcgagtaatagcagcagcaacaacaaaagtaacgcctcg
gcctccagttccgccgccgagagagtgaagcgccccatgaatgcctttatggtgtggtct
cgaggccagagacgcaaaatggcacaggaaaaccccaagatgcacaactcggagatctcg
aagcgtctcggggccgagtggaagctcctctcggagaccgagaagagacccttcatcgac
gaggccaagagactgcgagcagtgcacatgaaggagcatccagactacaagtacagacca
cggcggaagaccaagacactcatgaagaaggacaagtaccccttggcatccggtctcctc
ccatccgaccccacgcgacctcccgtacagcaagtgacccgagatatgtacaatatgacc
aatggttacatgcccaatggcgactacggcgattacggtgagtggcgatacgggtatgat
ggctacggtgcaagccaaggctatccatacatgacaagccaagtctacagcggttacgac
atgaccaggggctactctccgacctcctccagcacgccttcctacatgaatggatcgtac
agttctgcggccatgtatgcatcggctccatctccttattccatgagccaaattcttcga
ctcaagagtgctacccctcctcccttgcagatggcgtccatggcgtcaggagttggttct
gtgggctccgtcggatcttctgcgtctcattcaccgacgcccatcaagtctgagacgccc
actctcccagtgtcatcccctggggccactatgcctccttctgcaagccataccacggca
agcgactatcaaagtgccgtgatgaaacgcgagtatggttcgggtcagcctggacagcag
gacctctcccagatgatctccatgtacctgccgggctcccaggaacgccacgaacagcag
aaggcagcagctgccgccgcatatatgtcccacgcccattatcacgcccacgccgccgcc
tcacctgagcagatgccgcccgcgccaatgccactcgcccatatgtaa
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