Macrobrachium rosenbergii (giant freshwater prawn): 136833651
Help
Entry
136833651 CDS
T10429
Name
(RefSeq) rootletin-like isoform X1
KO
K16469
rootletin
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mrj03037
]
136833651
Cilium and associated proteins [BR:
mrj03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
136833651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
PUMA_CC
CENP-Q
ERM_helical
YwqH-like
CENP-F_leu_zip
Crescentin
GnsAB_toxin
Motif
Other DBs
NCBI-GeneID:
136833651
NCBI-ProteinID:
XP_066951893
LinkDB
All DBs
Position
52:4659099..4989532
Genome browser
AA seq
2659 aa
AA seq
DB search
MGNEGGRLTSYDDLCIEREESEYQNQGSSSLDSRVRLVNSKRTTSILFGGRNAVPRGARN
GMGDKNDSSDDSGGFRSDSGSDSDSGGFRPIDASERPRLRGILKTRRHRRAKRDSIEGGV
TKYESCVSITSTEGKSDGVPESKYSEGVSKDSIPSQTVTPRVGDSERTKDRTSRPPLVAT
KSQHPPKRDQITVVSSDSQVNGDIPQPSIRTSMFPPSPPPRSSSYRETLKVDHPPPPPPP
PVPERGTSKSALLTQIHILRRFGKSLQEGAVSTPRTEVTTLSSVTTVTEKKRAGNLVELE
HDLTLSDSPRLPVSTPRSPANSVKSRLSPTTSTPREGRRTGSANIDTYVPSSPRLEMSQD
LQESTRYLPDSSPRARRTQRSPTRPQFRKSSDIANLYLYGARGYRRPEQVSSISTSSDSV
LQEAETAPQIPPRFYRPPVPFARRVLTGNVQKLTKRFEKSIASGTGKVEAKDSSEEEFLP
TSVRLRRLFRREFDDVGYAKTGYRYLTVGPTGEIVQRGPWPSPSLYSAPKSPKSPKRLSG
SLGRHDSDLELLVREGEAVSTRLRNLLTHNLSSPRSAAGGVSSRPRRAASTESPRHHSLE
RRAEGLTDGSSRLSRADLAFDDSTSPRHERGHPSSLPPRTRSLTDVRRPPATTSTPIKPD
LTPPGGGSRIRRDLFPSSAGTVTATTTPLSVGHLATSLTDTMDDPEMFRLEEETRYLQSE
VGRLEEMLATSRAERDRVSVQYNVLSDHVVDEWQEYQKRLEYFHDVHRKQTSLIDRLANK
VREYRSRNRELESRSTEALRYRDSNDREIETLNLALTTAEEKLRASEAQHTFDLETALVK
LEDEQHRCETFSTQVSNLQQQLAKVESTLSQVTEERDKAQQALKRLADDVKAKEEQWVAE
SQQFNKYYISEHKNLLDLWREIGSVKRTFSEVKHLTSRDLTELRGDFDRYSHLLLSACQS
AHSNMSIIPTGDKDEYVVANPSDLWGRIQECERSQVRAETEKTNLKEKINELNSRIAELN
NGLRDKERTITELNKKLDEGMSEAEIQETLREKVRTLEAYMVDIAQTVIKDSEQSTGDAD
GKTPSAFRIVRDSDQGIAPDLPQSTVSAVRTALSNRHIQIHELQLKLTSSKEQLAALRKQ
YEVAESAQRSLEGTILELHDEMEALGRQKEEIAREKDRLCEDLDAVTAEKSTLEKTKQTL
KTQLEAAEEETERRARQVTELEKEKAALGEERSYLNSKLMREKEEVQKHVNTITILNTEL
SSVQHQVTILSESLGKVRAAEEKLDQEKDELRDQIRAMERHRTELEAKLAHSLRQETDLR
EALEKVESYSINLGQDKSQLVSKITSLETERAALGTERAELRTEIERLKDDLAVLEEERS
SHETTINTLNEKITLLSIDKEKIELELNDIITERNELHGQLTALERIKTSLENELTTITN
NLTEKIKLIERLNGEKEGLTKENAEMEVKLNGAEKELSALRENLTTLKAEKQSLESFATS
LEKKWSNNEARRTQLEKENQNLTSDKERLNTQMNKLQRELEGELAKLRESRTALERRLDE
KETEHKKTLMMLRNQYEEALDDLRKEKSNIQLELEDKLNSTIHSMKMERDELELKKDQEI
SALKRYSEKLQRERDDSTLRFEEEKHRSMMLAQQEISSLEEKVAALQRDLSSYETQLEQL
RRDGTTKAEAGRASEGALHSKITQLKEELHNSSQHFEKQLKDEKDTYERRIRELQARIDE
ARRDHEVEITSLKTDLRLAREDANRLQQDLEDAEGKLKEAEDTRVALKKELNRANEEMRS
AEERRSNDLQALIRKVDVEKKDLQKRLDEKESKLSALEVSEAKHADLITRMTAQLRDLNT
VKQDARREISELKKKQQLSETEAVGRSQELENLRLRLSSEEDRHNECRKEANKLKTKVGE
YERERDNLQTELALLERRLTELEDHHAAKEQELATSLEESRANERKLNDEKKNLENYLNN
ANQQISDLKVKLSREEGHVEALEQQLNTLDTNRDQLERKLQNVYASLRTVTRMYQDTSPS
SPALRSRKGTKIGFELSGSHSDLQASIEALGSTEKINVAEIDPETVRHELRALMTQMNQV
ELERDDAMAHVSSLERQLSELQEAHQKSEARLRDVTRALSELEEKKRYSDDKLNKAVSHA
SQQDEALRRKEIEIRSLNEELNNTRRRVTDLEHEKGTLDDRVQKLKNGVNRIEMENADIK
EKLRASEQRGALLDDSKSRLEAELSATKKTVSEKQMEIENLHSTKDNVNRTIRALEDQNL
TLKNKVEDLKTRMAVISNSEAELKNKLSSINRSLKESVSSSSNMQEELSRSQNQLSRSEG
ERRQLEEKVADLQSAIAELKRQKEQLSEFKTKAQQDLSNAEIKNAELEMSLKSLKGNLGE
RSSATDELVAKVSRLEQEKFELQTKLNNLERKLALSEAEKRDIEKTEYRIEKDKTDIKKI
LEKYEQDRHDRPDHHRSDTVILSGSEQSVHDSNISALRVENMELRRKIDDLETSRTDLQQ
KHLKETLEMSSDHRRERQIDSEKIRRLTNQLEALRQEKERCELRIHSLEQQIAQYRDQIR
EYRSRSSAVAADVRRVRMSMTESLHNIGTHPRISAGVVDSEIQNLSSRQARSPRATRQRR
YASASPGRRPDQRKTLTFT
NT seq
7980 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgagggtggcaggcttacgagttatgacgatttgtgcattgagagagaagag
agtgaataccagaaccaggggtcgtcttcccttgattctcgtgtgcgtcttgtcaactca
aagaggaccaccagcatcctgttcggcggaaggaacgcagtccctagaggagcacggaac
ggcatgggggacaaaaacgactctagcgatgacagcggcggttttcgaagtgactccggt
agtgacagtgacagtgggggcttcaggccaatagatgccagtgaaagacccaggttgagg
ggcattttgaaaaccaggcgacatcgtagagcgaaaagagactcaatcgaaggaggcgtc
actaagtatgagtcatgtgtgtccataacctcaaccgaagggaagagtgatggtgtcccg
gagagtaagtacagtgagggtgtaagtaaagatagtatccccagccagactgtaacccca
cgtgttggtgatagtgaaaggactaaggataggactagtaggcctcctctggtagcgaca
aaatcccagcatcctcccaaaagagaccaaattacagttgtgtcttctgattctcaagtg
aatggtgatatacctcaaccttccatacgtacttccatgtttcccccaagtcccccgccc
cgatctagttcttatcgtgaaacgcttaaagtagatcaccctccacctcctcctcctccc
ccagtccctgaacggggcacgagtaagtctgctttgcttacacaaatccatattcttaga
aggttcggtaaatctctccaggagggcgctgtttccacacccaggacagaggttaccacc
ctttcttctgtgactactgttactgaaaagaaaagagctggtaacttggttgagttagaa
cacgatttgactctatcagatagtcctaggcttccagtttccaccccaaggtcacctgca
aattcagttaaatcaaggctgtcacccacaactagcacaccccgcgaaggtaggcgaaca
gggtcagccaatattgatacttacgtcccctcatctccaaggcttgagatgagtcaggac
ttacaagaaagtacaaggtatcttccagattcaagtccccgcgctcgaaggactcagcga
agtcctacaaggccccagtttaggaagtcgtcagacattgctaacctgtacttgtatggt
gctaggggctacagaagaccagaacaggtgtctagcatttccacttcttcagactcagtc
ttgcaagaagctgagaccgctcctcaaatacctcccaggttctaccgtccacctgtgccc
ttcgcgagaagggttcttacaggcaacgttcagaagctgaccaaacgctttgagaagagc
atagctagtgggactggtaaagtggaagccaaggattccagtgaagaggagtttctgccc
accagtgtgaggctccgacgcctctttcgcagggaatttgatgacgtaggctatgctaaa
acaggatatcgttacttgacggttgggccaactggggagatagttcagaggggtccatgg
ccttcacccagcttatactcggctccaaaatctccgaaatcaccaaagcgtctgagtggt
agcttgggccgccatgacagtgacttggagttgctcgttcgggagggcgaagcagtctcg
accagacttcgcaacctgttaacccacaacctctcgtccccaagatcagcagcgggagga
gtctcgtctcggcccagaagggcagcttccaccgaatctccaagacaccattccctcgaa
cgtcgagccgagggcctgacggacgggtcatcgcggctgagtcgcgctgacctagctttc
gatgattcgacctccccgaggcatgaacgaggtcatccatcttcgctgccgcctcgcaca
aggtcactcaccgacgtcaggagaccaccagcaacaaccagtactcccataaaaccggat
ttaacgccacccggtggcgggagccgaattcggagggacctcttcccttcgtctgctggg
accgtcaccgccactactacacccctctccgtcggccacctcgccacctctcttactgac
acgatggacgatccagagatgtttcgtttggaggaggagactcgttatttgcagtcggag
gtgggtcgcctggaagaaatgctcgctacctcacgagctgaacgtgacagagtatcagtt
cagtacaatgttctgtccgaccacgttgtggatgagtggcaggaataccagaagagatta
gagtattttcacgatgtgcataggaagcagacatctttgatagaccggttagcaaacaag
gtacgagagtaccgaagcagaaaccgggaacttgaaagcagaagtactgaagccctacga
tacagagacagcaatgatagggaaattgagacgctcaatcttgctctaaccacagcagaa
gaaaaattgagggcttcagaagctcaacatacttttgaccttgaaacagctttggtcaaa
ctagaggatgaacaacacaggtgtgaaactttcagcacacaagtatccaacttacaacag
cagttggcgaaagtcgaaagtactctgtcacaggtgactgaggagcgagacaaggctcaa
caagctctcaagcgcttagctgacgatgttaaggctaaggaggagcaatgggtcgccgaa
tctcagcaattcaacaaatattatatatcggaacacaaaaacttacttgacctttggcga
gaaatagggtctgtgaagcgcaccttctccgaggtgaaacacctgacctcccgcgacctg
acagaattgcgaggtgacttcgaccgttattctcatctcctcttgtctgcctgccagtca
gctcactccaacatgagtatcatacccacaggagataaggatgaatatgtggttgctaat
ccatcagatttgtggggtcgcatccaagaatgcgagaggtcacaggtccgtgccgaaacg
gagaagaccaacctcaaggaaaaaattaatgaacttaattcgagaatagccgaacttaac
aacggtttgagggacaaggaaagaacaataacagaacttaataaaaaattggatgaaggc
atgtcagaagcggagattcaggagacactgagggagaaggtgcgcacattagaagcatac
atggttgatatcgcacagaccgtcatcaaggattctgagcagagcactggtgatgcagat
ggcaagactccttcagctttcagaattgtacgagattcagaccagggtatagcaccagat
ttacctcagagtactgtgtctgctgtacgaacagctctctcaaatcgtcacattcagatt
cacgagctacagctgaagttgacatcatccaaagaacaattggctgctcttcgtaaacaa
tatgaagtcgcagagtcagcacagcgatcccttgaaggaaccattcttgaacttcatgat
gaaatggaagccctcggaagacaaaaggaagaaatagccagagaaaaagatagactctgt
gaggatttggatgcagtaacagctgaaaaaagtactttagaaaaaacaaagcaaactctc
aaaacccagttggaggctgctgaagaagaaacagagcggcgagcccgtcaagtaacagaa
ttggaaaaggagaaggcagctcttggtgaagaacgctcataccttaattcaaaactgatg
agagaaaaagaagaggtccagaagcatgtaaataccatcacaattctaaacacagaactc
tccagtgttcaacatcaggttactatattgtctgagtcattgggaaaggtacgtgctgct
gaggagaagttagatcaggagaaagatgaattgcgagaccaaatacgagcaatggaacga
caccgcactgaattggaagcaaaactggctcactccctacgtcaggagactgaccttagg
gaggcccttgagaaggttgaatcttacagcatcaaccttggccaggataaatctcagctg
gtctccaagatcacatctcttgaaacagagcgtgcagccttggggactgaaagagcagag
ttacgtacagagattgaacgactcaaggatgatttggctgttttagaggaagagcgatct
agccatgagactactattaacaccttgaatgaaaaaataacacttttatcaattgataaa
gaaaagattgaactggagctgaacgacatcatcacagaacgaaatgagttacatgggcaa
cttacagccctggaacgtattaagacttcattggagaatgagcttactaccatcaccaac
aacttaactgaaaaaatcaagttaattgagaggctcaatggtgaaaaggaaggactgacc
aaagaaaatgctgaaatggaagtgaaattgaatggggctgagaaagagctaagtgcatta
cgtgaaaaccttacaacactgaaagcagagaagcagagccttgaaagttttgccacatct
ttagaaaagaagtggtctaataatgaggctcgtcgcactcagctagagaaggagaatcaa
aatttgacgtctgataaggagaggctcaatacccagatgaacaaattacaacgagaactt
gagggagagcttgctaaactcagagagtcacgaacagcacttgagcgacgattggatgag
aaggaaactgagcataaaaagacactgatgatgcttcgtaaccagtatgaagaagctttg
gatgatctaagaaaagaaaagagtaacattcagctagaacttgaagacaaattgaattcg
accatccactccatgaaaatggagagagatgagcttgaactcaagaaagatcaagagata
tcagcactgaagcgttactctgaaaagctacaacgtgaaagagatgattcaactttgcgt
tttgaagaggagaaacaccgttcaatgatgctggctcagcaagaaatatcaagtctggag
gaaaaagttgctgcattgcagagggatttgtcttcatatgagactcaactagaacagctt
cggcgggacggcaccaccaaagctgaagctggcagggctagtgaaggagcattacatagc
aaaattactcagctgaaagaagaattacataacagcagccaacactttgaaaagcagcta
aaggatgaaaaagacacatatgagcgtagaatacgagagctccaagcacggatagatgaa
gctcgcagggaccacgaagtagaaattacatccttgaagactgatttgagattagccaga
gaagatgcaaatcggctccagcaggacctggaagatgctgaagggaagcttaaagaagcg
gaagatacaagggttgccctcaagaaagaactcaatcgagcaaatgaggaaatgaggtct
gcagaagaaagaagatccaatgacctacaggctctgattaggaaagttgatgttgagaaa
aaggacttgcaaaagcgacttgatgagaaggaatccaaactgagtgctttagaagtctct
gaggcgaagcatgctgacttgataacacgtatgacagctcagctgcgtgatttgaatact
gttaagcaagatgcaagaagagaaataagtgagctcaaaaagaagcaacagctctcggag
actgaagccgtaggtcgtagtcaggagttggaaaatctaagacttcgattgtcatcagaa
gaagaccgtcacaatgagtgcagaaaggaagctaacaaactaaaaactaaggttggagag
tatgagcgagaaagagataatctccagacagaattagcacttttagaacggaggttgaca
gaacttgaagaccatcatgcagcaaaagagcaagaacttgccaccagccttgaagaatcc
agagcaaatgaacgaaaactcaatgatgaaaagaagaaccttgagaactatctaaataat
gccaatcaacaaatcagtgatctaaaggttaagctttcccgcgaagaaggacacgttgag
gcacttgaacagcagctgaatacattagatacaaatcgtgatcagttggagaggaagtta
cagaatgtttatgcttcgctgcgtactgtgacgcgcatgtaccaggacacctcaccatct
tcacctgcgctacggagcaggaagggcaccaagattggtttcgaactgtctggtagccat
agtgatttacaagcatccatagaagctcttggatccactgaaaaaattaatgtagcagaa
attgaccctgaaacagtgcgccatgaattaagagctcttatgacgcagatgaatcaagtg
gagttagagagggatgatgccatggcacatgtttctagccttgagagacagttatcagaa
cttcaagaagctcaccagaaatcagaagcacggctaagagatgtaactcgggctttgtca
gagttggaagagaagaaacgttacagtgatgataagctcaataaggcagtgtcacacgct
agccagcaggatgaagctttacgtcgaaaggaaattgagatccgttccttgaatgaagag
ctaaataacacaaggagaagggtgaccgaccttgagcatgagaaaggaacccttgatgac
cgtgtgcaaaagctaaagaatggtgtaaatcgaattgaaatggagaatgcagacatcaaa
gaaaaattaagagcctcagagcagcgaggtgcacttcttgatgattccaagtcaagatta
gaagctgaacttagtgcaactaaaaagactgttagtgaaaaacaaatggagattgagaat
cttcactctacaaaagataatgtcaaccgtaccattcgtgcacttgaggaccaaaacttg
accctcaaaaataaagtcgaagatctgaagactcgaatggcagtaatttctaactctgag
gcagaattgaagaacaaactctcatccatcaaccgatctttgaaggagtcagtatcatca
tctagtaacatgcaagaagaacttagcaggtctcagaatcagttatcacgaagtgaaggt
gaacgtcgtcagttggaggagaaagttgcagatttgcagagtgcaattgcagaattgaaa
cgccagaaagaacagctgtcagagttcaaaaccaaagctcagcaagacctctcaaatgca
gagataaagaatgctgaattagaaatgagcttgaagtctctgaaagggaaccttggagag
cgatcatctgcaacagatgagcttgtcgcaaaggtctcccgattagagcaggagaagttt
gaactccagaccaagctcaacaatctggaaaggaagttggccctaagtgaagcagaaaaa
cgtgatattgaaaagacagaatataggattgagaaggataaaactgatataaagaagata
ttggaaaagtatgaacaagatcgtcatgatcgtccagaccatcatcgttctgatacagtg
attctgagtgggtctgaacagtctgtgcatgactctaatatcagcgctcttcgtgttgag
aatatggagctacgcagaaagattgatgacttggaaacctcaagaactgatctacaacag
aaacatttgaaggagactttggagatgagcagtgaccatcgccgagagagacagattgac
agtgaaaagattcgtcggcttactaaccagttggaagctctcagacaagagaaggagcgt
tgtgaactgagaatccattcacttgaacaacagattgcccagtatagagatcagattagg
gagtaccgaagtcgtagttctgctgtcgcagctgatgttcgaagagtacgcatgtctatg
acagaatcattacacaatattggcacacatcccagaatctcagctggcgtagttgattct
gaaattcagaacctatcgagtaggcaagcacggtcgccgagggcaaccaggcaacgtcgt
tatgcgtcagcatcaccagggcgccggcctgatcagaggaagaccttaaccttcacatga
DBGET
integrated database retrieval system
