Macrobrachium rosenbergii (giant freshwater prawn): 136834058
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Entry
136834058 CDS
T10429
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog B
KO
K13174
THO complex subunit 5
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
mrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
136834058 (thoc5)
Spliceosome [BR:
mrj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
136834058 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136834058
NCBI-ProteinID:
XP_066952419
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Position
4:47799521..48119354
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AA seq
736 aa
AA seq
DB search
MGSGDENNDGGPREAKKRRTESTDSAIKGATGEESMEPPSEKNNDPFQSSLDHECKEAEQ
RTEEEDQACFATVTKHIRLLLKEINDLKTQKSENYANEVDERRIQVLMLMLSLRRLSRVQ
KVRVRDARERTSEARQSVDGVTLQLQNLLYEVAHLKKEVRRCLDFQSADQEIDLVPLEQF
YSEAPESISCPTETLEDPHKQRLARLQWELEQRRDQTQLFDKLTQEKEAVGETINEHDRK
LASLAPRINAILEATRPLQESLGLRLDAKKEQQRIVQLLPSPLYTLWVQASAYGEAFDSN
IKVEVLGDIEAAKKKNVKDDESKCENLSDSDNDQEQQEDNLSRKKRNRKIQKVETTEDAD
YGAKQILGMHPLYVRITVSTKEGNSVVIVFYYIRTLRIVTAKCSVHLQEKTKAALTDVIS
GDTLLNCLFPDDLGINSPNPANFYQLNRSQVYLSEHLGMTGRPYKWAQTLAGLSFANADL
HALDGEDSQDSGTANGPYASSHRVDSEAVVWQDSAEHMPNTISAIRRRLQARLALHNQLL
NLESATSTSAIALPAELLKQHFPGKICTEFKSWRPVTWSDYEASPSTQLVRDAKIVTPHH
LFFTAIFERKNVRLEALIALSPDHPTTEPVTSLCLHWDGQHQASNNPQLRQMEKEVNVHW
DELAPTRSERLQLLPLILYRLAVCLDVYTEAYSAHVEAKGNDTHFHKEKIFFRPARGPDR
AFPFKYHPKLGVFSQR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggggagcggcgatgagaataacgatggaggtcctagagaagccaagaaaaggaggaca
gaaagcactgacagtgccattaagggtgctaccggcgaagagtccatggagccaccgtcg
gagaagaacaacgatccattccagagtagtttggatcatgaatgtaaagaagctgagcag
aggacagaggaggaagaccaagcatgttttgcaactgttactaagcacattcgattactt
ttgaaggagataaatgacttgaaaacacagaagtcagaaaattatgcaaatgaagttgat
gaacgacgtattcaggttttgatgcttatgttgtcacttcgacgtttgagtagagtgcaa
aaggtacgtgtgagagatgcccgggagagaacctctgaggctcgacaaagtgtggatgga
gtgactttgcaacttcagaatcttctttatgaggtcgctcatctcaagaaggaagtccgt
aggtgtctagacttccagtcagctgatcaggagattgatcttgtgccactggaacagttc
tattcagaagctcctgagtctataagttgtccaacagaaaccttggaagatccccacaaa
cagcgcttggctcggcttcagtgggaacttgagcagcgccgtgatcaaacacagttgttt
gacaagctgacacaagagaaggaggctgttggagagacaattaatgaacatgaccggaaa
ctggcttccttggcaccaaggatcaatgcaatactggaggctactcggccactgcaggaa
tctctgggtttacgcttggatgcaaagaaagagcagcagaggattgtgcagttactacca
agtccattgtatacactttgggttcaggcttcagcctatggagaagcttttgatagcaac
attaaagtggaagtgttaggggacatagaggctgccaagaagaagaatgtcaaagatgat
gagtcaaaatgcgagaatttgtcagattctgataatgatcaagaacaacaagaggataac
ttgtctcggaagaagcgaaatcgtaaaatccagaaagtggagaccactgaagatgctgat
tatggggctaagcagattcttggaatgcatcctctttatgttaggattactgtcagtaca
aaagagggcaacagtgtcgtaattgtgttttattacattcgaacattgcgtattgtgact
gcaaagtgttcagttcatcttcaagagaaaactaaggctgcattaactgatgttataagt
ggtgacacactgctgaactgtctcttccccgatgatcttgggataaactctccaaatcca
gcaaacttttatcaattaaatcgctctcaggtgtacttaagtgaacacttgggaatgacg
ggacgtccatataagtgggctcagactttagctggcttgtcatttgcgaatgctgatctg
catgctttggatggtgaagattcacaggattcaggaactgccaacggcccatatgcttca
agccatcgtgtagatagtgaagctgttgtttggcaggatagtgctgaacacatgcctaat
acaatttcagcaattaggcgtcgactacaagcaagattagccttgcacaatcagttatta
aacctagagagtgctacttcaaccagtgcaattgccttaccagcagaacttctgaagcaa
catttcccaggaaaaatatgcactgagtttaaatcttggcgtccagtgacttggtctgat
tatgaagcatcacctagcacacaacttgtacgtgatgcaaaaattgttacgcctcatcat
ctgttcttcactgccatatttgagagaaaaaatgtccggttagaagctttaattgcactg
tcccctgaccatccgacaactgaacctgttacatcactttgccttcattgggatgggcaa
catcaggcatctaataatccacaactaaggcaaatggaaaaagaagtaaatgtgcactgg
gatgaattggccccaacacggagtgaacgtttacagttattgcctctaatattgtaccgt
ttggctgtatgcttggatgtgtacactgaagcctacagtgctcatgttgaagccaaaggc
aatgatacacatttccacaaagagaagatattcttcagaccagcaagaggtcctgaccga
gcctttccgtttaagtaccacccaaagttaggtgttttttcacagcgttga
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integrated database retrieval system
