Macrobrachium rosenbergii (giant freshwater prawn): 136835375
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Entry
136835375 CDS
T10429
Symbol
Mat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1 isoform X1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03022
Basal transcription factors
mrj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136835375 (Mat1)
09124 Replication and repair
03420 Nucleotide excision repair
136835375 (Mat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrj03021
]
136835375 (Mat1)
03400 DNA repair and recombination proteins [BR:
mrj03400
]
136835375 (Mat1)
Transcription machinery [BR:
mrj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
136835375 (Mat1)
DNA repair and recombination proteins [BR:
mrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
136835375 (Mat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-UDP
Motif
Other DBs
NCBI-GeneID:
136835375
NCBI-ProteinID:
XP_066954936
LinkDB
All DBs
Position
55:complement(67575177..67817553)
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AA seq
395 aa
AA seq
DB search
MVCRDARDESVLPGRERKGSIRGTVTYTPMYTCHHLGIISKRQMFESWSGEMRFPCITLF
REYRMTEYYYDASYEIQCPACKGTKYRNPQMKLMVNICGHPLCDACVRMYFLKESAQCPE
CGIVLKRSKFRVQVFEDPLVEKEIDIRRKVMKIYNKFEEDFETTAEYDDYLEEIEQIVYN
LTNDVNRLETEKKMESYERINKDQIRRNYGKKSKGEEEILRQLDLENVIIEERKKSLAEE
ENREKNLRQRNKTSLIQELMASEGDAKAILEDHNKRLEEEKQQEDKDREREQLAKAQRAL
KAKEFTSGVKIGFAQMMNAPVNTRKEERYVYEPPTLPFSLSTPSWDELETGGYLNHVRRA
SPQANAGGYTEHYACLRALQDFMGSYNIPASSATS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggtctgccgcgatgccagagacgagagtgttttgccagggagggaaaggaagggttcg
atcagaggcacagtgacttatacgcccatgtatacctgtcatcacctcggtatcatatcc
aaaaggcaaatgttcgaatcctggtcgggagagatgcgctttccatgtataactctcttt
agggaatacagaatgacagaatactactatgatgcatcatacgaaattcagtgccccgcc
tgtaagggaacaaaatatcgaaatccgcagatgaagctcatggtcaacatttgtggacac
ccattatgtgatgcttgtgtgcggatgtattttttaaaagaatctgctcagtgcccagag
tgtggaattgttttaaagcgatccaagtttcgtgttcaagtctttgaagatcccttggta
gaaaaagaaatagatattcggcgaaaggtaatgaaaatctataataagtttgaagaggac
ttcgaaaccactgcagaatatgatgactacttagaagaaatagaacagattgtttataat
ttgacaaatgatgttaaccgtttggaaactgaaaaaaagatggaaagctatgaacgaatt
aataaagaccagatcagaagaaattatgggaaaaagagtaaaggagaagaagaaatttta
agacagttagacttggaaaatgtaataatagaagagagaaaaaagtctttagcagaagaa
gagaacagagagaaaaatttgcgacagaggaataaaacttccctaatccaggaacttatg
gcatcagaaggagatgccaaagctattttagaagatcacaataagcgtcttgaagaagaa
aaacaacaagaagacaaggatcgagaaagagaacagttggctaaggcacagagggcactc
aaagcaaaggaatttacatctggtgtgaagataggctttgcacagatgatgaatgcacca
gtaaacacaagaaaggaagagagatacgtgtatgaacctccaactctgccattttcattg
tctacaccatcatgggatgaactagaaacaggtggctacctcaatcatgtaaggcgagcc
tcaccacaagctaatgcaggtggttatacagagcattatgcctgtctaagagctcttcaa
gactttatgggttcttacaatataccagccagttctgctacatcataa
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