Macrobrachium rosenbergii (giant freshwater prawn): 136835452
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Entry
136835452 CDS
T10429
Symbol
pasilla
Name
(RefSeq) RNA-binding protein Pasilla isoform X1
KO
K14944
RNA-binding protein Nova
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrj03041
]
136835452 (pasilla)
Spliceosome [BR:
mrj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
136835452 (pasilla)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
136835452
NCBI-ProteinID:
XP_066955099
LinkDB
All DBs
Position
55:76431197..76462285
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AA seq
569 aa
AA seq
DB search
MASSEEIMEESITSPGTPDSRKRPLDIDSDDVMSKRSHYIPDMQSDGTYHLKILVPSVAA
GAIIGKGGETIAQLQKDTSARVKMSKANDFYPGTTERVCLITGNVDAILTVLSFIMEKIK
EKPDPNAKPAIDFDNKQTAEREKQISRSARSPQVKILVPNSTAGMIIGKGGTYIKQIKED
SGAYVQISQKAKDQSLAERCITVISNDVENSKSACLMILAKIVEDPQSGTCLNVSYADIT
GPVANPNPTGSPFANSPGGQNAQNGTIGGLSNPLSAVSGLGNLLGGGVNLTLNLSSAYPN
GGAGNPVITGQLLEHVRSILRSSGFADQSNAEVCSAINTLINYGIIGLGLGLGSPSSQQG
GQGQGQGNMGGNAMLGNINSSGNPGEYHGSSMSNGNNGPFGPIGTTVASGLNLGQGLGGP
TSPQRQVDRFNSEPPFDPFRRQSTEMGGSLPLNSNSFGLGTPLRKSPSPGELPPGAPDGS
KKVDVEVGEHIVGAILGPGGKSLVEIQHISGTTIQISKKGNYVPGTRNRVVTITGLPSGI
STAQFLIEQRISDEEGKRARQNAIMGVMP
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttccgaggaaattatggaggagtctataacttctcccggcaccccagactcc
cgcaaaagaccgttggatatcgattcggatgatgtcatgtcgaagaggtcgcattatatc
ccagatatgcagagtgatgggacatatcacttgaagatccttgtgccaagtgtggcagca
ggtgcaattatcggaaaaggcggtgaaactatagcccagttacagaaagacacttcggct
agggtgaagatgtcaaaagctaatgatttctatccaggtacaacggaaagggtgtgtctc
atcacggggaatgtagatgccattttaactgtgttgtcatttataatggaaaaaatcaaa
gagaagcctgatccaaatgccaaaccagcaatagattttgacaacaagcaaactgcagag
agagagaaacagatttcaagaagtgctcgctccccacaggtgaagattttggtcccaaac
agcacagctgggatgattattgggaaaggcgggacgtacataaagcaaattaaggaagat
agtggagcttatgtacagatatcacagaaagctaaagaccagtctttagcagaacgttgt
ataacagttatatcaaatgatgtggagaacagcaagagtgcctgcctaatgattttagcc
aagatcgtagaagacccacaaagtgggacatgtttgaatgttagttatgctgacattact
ggtccagttgctaatcccaatcccactggctctccctttgcaaattctcctggtggacaa
aatgctcaaaatggcaccatcggtggtttatccaatccactatctgctgtgagtggactg
ggtaatctcctcggtggtggtgttaacctgaccttgaacttgagttctgcatacccaaat
ggaggtgctggtaatcctgttattacaggccaattattggagcatgtccgatctatcttg
agatcttcaggttttgctgatcagtcaaatgctgaagtatgtagtgccataaatacacta
attaattatggcatcataggactggggctaggtcttggaagtccatcatctcaacaggga
ggtcaaggccagggtcaaggtaatatgggaggtaatgccatgctcggtaatattaattcc
tctggtaacccaggggaatatcatggttcctccatgagcaatgggaacaatggtccattt
ggtcctataggcacaaccgttgcatcaggactaaatcttggacaaggtttagggggacca
acttcaccacagcgacaagtggacagatttaatagcgaacctccttttgatccctttcgc
cgacagtcgaccgagatggggggcagcctgcctctgaacagtaactcctttggtcttggc
acccctttaagaaagagcccatcaccaggagaattacctcctggtgccccagatggcagc
aagaaggtggatgttgaagttggtgagcacatagttggtgctatccttggtcctggaggg
aaatcactggtggagattcaacacatctctgggacaacaatccaaatctccaagaagggt
aattatgtacccggtacaagaaaccgggtcgtgaccattactggcctcccctcaggcatt
tcaacagcgcagtttctcattgaacagcgtatatctgatgaggaggggaagcgggcccga
caaaatgccataatgggggtcatgccttaa
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