KEGG   Macrobrachium rosenbergii (giant freshwater prawn): 136835885
Entry
136835885         CDS       T10429                                 
Symbol
Spt5
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
  KO
K15172  transcription elongation factor SPT5
Organism
mrj  Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:mrj00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    136835885 (Spt5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mrj03021]
    136835885 (Spt5)
   03019 Messenger RNA biogenesis [BR:mrj03019]
    136835885 (Spt5)
Transcription machinery [BR:mrj03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     136835885 (Spt5)
  RNA polymerase I system
     136835885 (Spt5)
Messenger RNA biogenesis [BR:mrj03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     136835885 (Spt5)
SSDB
Motif
Pfam: KOW4_SPT5 KOW KOW7_SPT5 KOW6_SPT5 KOW2_Spt5 KOW5_SPT5 Spt5-NGN KOWx_SPT5 KOW1_SPT5 Spt5_N GPKOW_C SH3_KIN17_C RSRP DUF3912
Other DBs
NCBI-GeneID: 136835885
NCBI-ProteinID: XP_066956199
LinkDB
Position
1:17780250..17835454
AA seq 1148 aa
MMSDSDASFHSDSEVEKSGGGSDSEGETRRSRSRSGSGSRRGSPSRSRSRSASGSRSRSR
SRSGSRSRSRSRSRSQSRSRSRSRSRSRSRSRSRSVRSDEAMEARSGEEEVSGDEEPADG
EDLANSEYDSEEEEDDDLHHKKKKKRGIVSDYFLDEAEVDDDEGEDDEDEEGDDYDLLGN
EKEEVGVTAREIEANRRAHSVWDNEREEEIEEYYRRKYAEETSAAMRFGEGGEEMSEEIT
QLTLLPGVKDPNLWMVKCRIGEEKMTALQLMRKMIAYQFTDEPLQIKSVVAPEGVKGYVY
IESYKQTHVKAAMEGISNLKLGTWKQTMVPINQMTDVLRVAKEVPTLKRGAWVRLKRGIF
KDDLAQVDYVDSSHNNVHLKLIPRIDYTRMRGALRGTQSENEKRKKFRRPPQKLFDMDAI
RAIGGEVSQDGDFLIFEGNRFTRKGYLYKIFAMSAIMADGVKPTLSELEKFEEQSLADME
LTTSGREEEAHSFAPGDNVEVHEGELMNLMGRVTRVDGNKIMILPKHEDLKDELEFSAHE
LRKYFNQGDHVKVIAGRYEGDTGLIVRVEENMIVLFSDLTMHELKVLPRDLQLCADVATG
VDSLGQFQWGDLVSLDAQTVAVIVRLEKENFQVLNMHGKLVQVKPQAVHKKEKRRAMVLD
SEQNTLQIKDIVKVIDGPHSGRQGEIRHLYRNFAFLHSKMMIENGGIFVCKTRHLVLAGG
AKTVTGGMGMTMGFMSPRLKSPVHPGGGGGGGGAGGGGVMDRGADRGAFGERNRGRGRGR
GAGRDRGVIGQTIKITQGPYKGHVGIVKDATDSTVRVELHSKCQTIIVDRSRVAVVGAPS
KPGSLASVTRTPTWSGSQTPMYGNTGSRTPMYGSQTPQYDGSRTPHYGSMTPSHDGSATP
GRQSAWDPTITNTPARHNEFDDYSFDEASPSPAYNPGTPGYQSDAGQGPYTPQTPGTVYS
SDHNYSPYQPEPSPTGYQPGGSPSGYVGTPSPGTGYQGSPSPGSGYASPSPLASYSPMTP
GAPSPYNPQTPGAGMDTLGMTDWQTSDIEVRIKETHDDSGLIGQIGEIRGVSGGMCSVFL
PEEERVVNILGAHLEPVTPAQGDRVKVIFGEEREQTGNLLSIDHNEGVVKLDHADVKMLQ
LRYLCKMK
NT seq 3447 nt   +upstreamnt  +downstreamnt
atgatgtcagacagtgatgcaagttttcactcggactccgaggtggagaaatccggtgga
gggagtgatagtgaaggagagacacgacgtagccgtagtcgtagtggcagtggcagtaga
cgcggttctcccagcaggagtagaagccggagtgcaagtggtagcagaagtcgcagcaga
agccgttctggaagccgtagcagaagtaggagtaggagccgcagccagagcagaagtagg
agccgtagtagaagccgaagtagaagcagaagcaggagccgatctgtaaggtcagatgaa
gcaatggaagctagaagtggagaggaagaagtcagtggtgatgaagaaccagctgatgga
gaagaccttgcaaattctgagtatgatagtgaagaagaagaggatgatgatctgcaccac
aagaaaaagaagaaaagaggcatagtttcagattacttcttagatgaagcagaggtcgac
gacgatgaaggggaagatgatgaggatgaggagggtgatgactatgatttgcttggaaat
gagaaagaagaggtaggcgttactgccagagaaattgaagcaaaccgtagagcacacagt
gtttgggacaatgaacgtgaagaagagattgaagaatactacagacgcaagtatgctgag
gaaacatctgcagccatgcgttttggtgagggaggcgaagagatgagtgaggagattacc
caactgactctccttcccggtgtcaaggatcccaatctttggatggtgaagtgtcgcatt
ggtgaagaaaaaatgactgctctgcagttgatgagaaagatgatcgcttaccagttcacc
gatgagccattacaaattaaatcagtggttgctccagagggtgtcaaaggttatgtatac
attgagtcatacaaacagacccatgtaaaagctgctatggaaggtatctcaaacctcaag
ctcggtacatggaaacagacgatggttcccatcaatcaaatgactgatgtcctgagagtt
gcaaaagaagttccaacattgaaacgtggtgcctgggtcaggttgaaaagaggtatcttc
aaggatgatttagctcaggtggattatgtcgactcatctcacaataacgttcacttgaaa
cttattcctcgaattgattatactcgcatgagaggtgctcttagaggaactcagtcagag
aatgaaaaaaggaagaagttccgccgacctcctcagaagctctttgatatggatgctatc
agggctatcggaggggaagtctcacaggatggtgatttcctcatctttgaagggaatcgt
ttcacgcgcaaaggttatttgtacaagatctttgccatgtccgcaatcatggcagacggt
gtaaagccaacgctaagtgaactggagaagtttgaagaacaaagtttggctgacatggaa
ctgacaacgtctggacgcgaggaagaggctcacagctttgccccaggagacaatgtagaa
gtacatgaaggtgaattgatgaatttgatgggtcgtgtaactagagtagatggtaacaag
attatgattcttccaaaacatgaagatttgaaggatgagttggagttttcggcacatgaa
ttgaggaagtacttcaatcaaggtgatcatgtaaaggttattgctggacgatatgaagga
gatactgggttgattgttcgtgtagaggaaaatatgattgttctcttctctgatcttact
atgcacgaattgaaggttttgccaagggatttgcaactgtgtgctgatgtggctactggt
gttgattcccttggtcagttccagtggggagatcttgtgtcactagatgctcagactgtt
gctgtgatagtaagactagagaaggaaaacttccaagtcctaaatatgcatggaaagtta
gtgcaagtcaagccacaggctgttcacaagaaggaaaagaggcgagctatggttcttgat
tcagagcagaacacacttcagataaaagacattgtaaaggtcatagatggacctcattca
ggccgacaaggagagatcaggcacttgtacagaaattttgccttcctccattctaaaatg
atgattgaaaatggaggtatctttgtgtgtaaaacaaggcatttggttcttgcaggaggc
gctaagacagtcacaggaggtatgggcatgactatgggcttcatgtctcctcggctgaag
tcccctgttcatcctggtggtggaggaggcggtggtggtgctggtggtggtggtgttatg
gaccgtggagcagaccgtggtgcttttggcgaacgcaatcgaggaagagggcgaggaaga
ggtgctggaagagatcgtggtgttattgggcagaccataaagatcacacaaggaccttat
aaaggtcatgttggtattgtcaaggatgccacagactccactgtacgtgtagaattgcat
tcaaaatgccagacgattattgtggaccgttcacgtgtggctgtagtaggggcaccatct
aaacctggctctctggcatctgtcactcgcactcctacctggagcgggtcacagacacct
atgtatggcaatactggatctcgcacaccaatgtatggctcacagactccacagtatgat
ggctctcgaacacctcattatggtagcatgacgccctcccatgatggatcagctacacca
ggaaggcagtcagcttgggatccaacaattactaataccccagcacgtcataatgagttt
gatgattattccttcgatgaagcatctccatccccagcatataatcctggtactcctggc
tatcagtctgatgcaggacaagggccatacactccacagactccaggcactgtttatagt
tcagatcataattacagtccttatcagcctgaaccatcaccaactggataccagcctgga
ggcagcccatcaggatatgttggcacgccaagcccaggcactggataccagggatcacca
tctccaggctcaggttatgcttccccatctcccctggcttcttatagccccatgactccg
ggtgcaccatcaccttacaaccctcagaccccaggcgctgggatggatacccttggtatg
actgactggcaaacctctgatattgaagtcaggattaaggagactcatgatgattctggt
ctcattggccagattggtgaaattcgtggtgtatctggtggtatgtgctcagttttcctt
cctgaagaagagcgagttgttaatattctaggagctcatctagagcctgttacccctgca
caaggggacagagttaaagttatattcggtgaggaaagagaacagactggtaatctgctt
tctattgaccataatgaaggagtggtcaagttggaccatgctgacgtaaagatgttgcag
cttcgttacttatgcaaaatgaagtaa

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