Macrobrachium rosenbergii (giant freshwater prawn): 136835967
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Entry
136835967 CDS
T10429
Symbol
sip3
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin B isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj04120
Ubiquitin mediated proteolysis
mrj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
136835967 (sip3)
04120 Ubiquitin mediated proteolysis
136835967 (sip3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mrj04121
]
136835967 (sip3)
Enzymes [BR:
mrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136835967 (sip3)
Ubiquitin system [BR:
mrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136835967 (sip3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf-ANAPC11
PGA28-like_dom
zf-RING_Vps41
zf-RING-like
zf_RING_Vps8_fungal
FAR1_N
zinc_ribbon_16
CCDC22_CC
Prok-RING_4
zf_RING_Vps8
FANCL_C
zf-HC5HC2H
zf-Nse
RING_Ste5
Motif
Other DBs
NCBI-GeneID:
136835967
NCBI-ProteinID:
XP_066955996
LinkDB
All DBs
Position
55:35994546..36310100
Genome browser
AA seq
678 aa
AA seq
DB search
MPAPMPVGALTMASFALTAAVIGNAYYQKKQFYPSVVYITKSNPSMAAIYLLAFTLVILL
GKFLKKIFFGSLRAAEFEHLIERSFYAVTETCLAFTVFRDDFSPKFVALFTVLLFLKAFH
WLADYRVDFMERSPVITFLFHIRVTSLLLLLSLLDLVLVSHAYLSTITRGASVQLVFGFE
YAILLTVALNIGVKYVCHTIDLQSENPWENKAMYLLYTELCMGLFKVLLYAVFMIIMIRI
HTFPLFIIRPMYLTMRAFKRALNDVILSRRAIRNMNTLYPDATAEELRAVDNVCIICREE
MVTGAKKLPCGHIFHASCLRSWFQRQQTCPTCRMDILRQTQPAPSAAPPQPEQPAQGAQT
PQAPQAAQQPQQQQPPQQLPNPFAGLFGGAHVRIGPPPAGLPPFPFPPMPMPHLQQQQDQ
QQTQSTTSAQSTTASTSTSTTGTTTTTSSTSTSAAASASGTGGSMGQPSGTLPTAPFNFM
PPFFPVLPFNIPPPPPPLNFSAMTDEEVRQMEGTERQHVEARIQVLRNIQTLLDAAVVQM
NQYASVVASLDVGNQNVTRNTVNPTATTQQPHESSPVNTTVFHEKNEDVAKEGQDDIPGP
TPVEVNQDSKSTAGAVSDERTDVTSTSASDTDTAAKDDVSSSWTSATSAADTTTPDIADP
DDPQEIRRRRLEHFNQTS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgccggcaccaatgcccgtaggggctttgaccatggcgtcttttgccctaactgctgct
gtgattggtaacgcctattaccaaaaaaagcagttttatccttccgtcgtctacatcact
aaatccaatccgagcatggctgctatatatctcctggcattcacactggttatcttgtta
gggaaattcctcaagaaaatcttctttggttccctgagagcagctgaatttgagcatctc
atcgaacgatcattttatgccgtcactgaaacatgcctggctttcacagtttttcgagat
gatttctctccaaagtttgtggccctttttactgtactgctctttctcaaggctttccat
tggctggcagactatagggtcgatttcatggaaagatccccagtcataacattcttattc
catatcagagttacatctttactgttgttgttgagtcttctggacttagtgctggtaagc
catgcttatctgtcgacaattacaagaggagcatcagtgcagcttgtatttggctttgag
tatgccatattgttaactgtggcattaaatataggggtcaaatatgtgtgccatacaatt
gatctacagtcagaaaatccatgggagaataaagcaatgtatctcctgtatacagaacta
tgtatgggtttgttcaaagttctactttatgcagtattcatgattataatgatcagaatt
cataccttcccattattcatcatcaggcctatgtatttaactatgagggcattcaagaga
gccctgaatgatgttattttgtcccgccgagctatacgaaatatgaacaccttgtaccct
gatgccacagctgaagaattaagagcagttgacaatgtgtgcattatttgtcgagaggaa
atggtcactggtgctaaaaaacttccatgtggacatatcttccatgcatcatgcttacgt
tcttggttccaacgtcagcagacatgtcccacttgtcgtatggacatcttgcgacagaca
cagccagcaccatctgctgctcctccccagccagagcaacctgcacaaggggcacaaaca
ccacaggctcctcaagctgcacagcaaccacaacagcagcagcctccgcaacagcttcca
aatccatttgctgggttgtttggaggtgcacatgtgcgtattggccccccacctgctggt
cttcctccatttccattcccaccaatgccaatgccacacctacaacagcaacaagatcag
cagcaaacacaaagtacaactagtgcacagagcaccacagcatcaacaagtacaagcact
acaggaactaccactacaacttcttcgactagcacttctgcagctgcttcagcctcagga
acaggtggcagtatggggcaaccatctgggaccttaccaacagctcccttcaattttatg
cctccattctttccagttcttccttttaatattccaccaccaccaccaccattgaacttc
tcagcaatgacagatgaagaggttcggcagatggaaggaactgagagacagcatgtagaa
gccagaattcaggttttgaggaatatccagactttacttgatgctgcagttgttcagatg
aatcagtatgcttcagtagtagcatctcttgatgttggtaaccagaatgttactaggaac
actgttaatcctacagcaactacccaacaacctcatgaatcatcacctgtgaatacaaca
gtcttccatgagaaaaatgaagatgtggctaaagaaggccaggatgatattccaggacca
accccagttgaggtaaaccaggattcaaagtcaacagctggtgctgtatcagatgaaaga
actgatgtgacgtctacatcagcatctgacactgatacagcagccaaagatgatgtatca
tcatcatggacaagtgcaacaagtgctgcagacaccactactccagatattgctgatcca
gatgatcctcaagaaattaggaggcgaagacttgaacattttaatcagacgtcttag
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