Macrobrachium rosenbergii (giant freshwater prawn): 136836064
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Entry
136836064 CDS
T10429
Symbol
SmD1
Name
(RefSeq) probable small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136836064 (SmD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrj03041
]
136836064 (SmD1)
03032 DNA replication proteins [BR:
mrj03032
]
136836064 (SmD1)
Spliceosome [BR:
mrj03041
]
Complex A
U1 snRNP components
Sm proteins
136836064 (SmD1)
U2 snRNP components
136836064 (SmD1)
Complex B
U1 snRNP components
136836064 (SmD1)
U4/U6.U5 tri-snRNP components
136836064 (SmD1)
Complex C
U2 snRNP components
136836064 (SmD1)
DNA replication proteins [BR:
mrj03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
136836064 (SmD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Gemin7
Hfq
SM-ATX
Motif
Other DBs
NCBI-GeneID:
136836064
NCBI-ProteinID:
XP_066956091
LinkDB
All DBs
Position
56:complement(24686898..24729470)
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AA seq
127 aa
AA seq
DB search
MKLVRFLMKLSHETVTIELKNGTQVQGTITGVDVAMNTHLKSVKMTLKNSEPVSYDTLTI
RGNNIRYFILPESLPLENLLIDDGPRARRGRGMGGRGGRGGRGRGGGRGGRGRGGPRGRG
RGGPPRR
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagtcaggtttcttatgaaactcagtcatgagacagtgacaatcgaattgaaa
aatggaacacaagtacaaggaaccattacaggtgtggatgttgcaatgaacacacactta
aaaagtgtgaagatgacgctgaaaaatagtgaaccagttagttacgacacacttaccatc
cgtggaaacaatattaggtatttcattctgccagagtctctgccattggagaatctcctt
attgatgatggtccacgtgccagaaggggtagaggaatgggtggccgtggtgggcggggc
ggacgtggccgaggaggtggacgtggtggcaggggacgtggtggtccacgtggaagaggc
agaggtggacctccacgtcgctaa
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integrated database retrieval system
