Macrobrachium rosenbergii (giant freshwater prawn): 136836283
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Entry
136836283 CDS
T10429
Symbol
Not10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-A isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136836283 (Not10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrj03019
]
136836283 (Not10)
Messenger RNA biogenesis [BR:
mrj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
136836283 (Not10)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_2
TPR_19
TPR_10
TPR_12
TPR_8
ANAPC3
TPR_17
TPR_1
DUF7017
SR-25
Coatomer_E
ANAPC8
ARM_TT21_5th
Alkyl_sulf_dimr
FRB_dom
IMUP
Motif
Other DBs
NCBI-GeneID:
136836283
NCBI-ProteinID:
XP_066956438
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Position
56:46758099..47148941
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AA seq
720 aa
AA seq
DB search
MTMAESKTTTEEAQGSTTSGESNQSCEATDGERDLAQAAHAEFMKSNYNAAMTLLNQLLN
TRPKDPKVLMNKAVVEYYKSDLKNTSVFRKQLVDICVQSGFKIDEVGSADEVDRSVIHLN
NCIVLYHLHQYRAALSLLEKMYTGLESLEESVGIGVCLLMAECYLGVYQPEKVLPVIAHT
ETTFLPQPLPHTPSPKQPPPQEKENKSPEKTGVSTGSGSNGNSSSSSSSSSSSSSSAAAD
EIRCSATQEQLRGKLQQLRVRAMLMMRSLRVAKKELKTIVTHAVSAGKSLNVTLVSLKSQ
LEYLRGNFRKAIKVLNQCAAIPAPSLTYGPSLGVMYYNNLGVIHLGLGKPTVACLYLQKA
LQETQTLGDTESSETSGDWLSTRSIYQLSSNVQSELYYNLGVTLLHMNKPDKAFDFLLEV
LQVHSTNPRLWLRLAECCIAVHKLCLKDDISIRKSVVQGTVGVGIHRKICIATCIDSHNK
KKDLESASDAAFPEPTLEFGRLCLRNALVLLPENASTTPLTDEQEASGVMPELYPAGPSS
PLRGTEVVSLRVSALACSAYVCLCLSDHSAALRHAETLLVAHPKIPGVYKLLGHLYAGEA
LICLGRVSEAVTHFDPRQIGDLSLSSSSQDVNQSPPLLLPNDSWYSGNLSTAMQVMRYNL
SVAYALRGEFDKASNILKEVWTERNGNMPPQVIMLAMYIQLQMGHADVMKNIVKKNILLT
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggctgaaagcaagaccaccacagaggaagctcagggctctaccacaagtggt
gagagcaaccaaagctgtgaggcaacagatggagaaagggatttggcacaagcagctcat
gcagaatttatgaagtcaaattataatgcagcaatgacccttcttaatcagttgcttaat
acaagaccaaaggatccaaaggtactgatgaataaggctgttgtagaatattacaaaagt
gaccttaagaacactagtgtattccgtaagcagttagtcgatatatgtgtacagtctggc
tttaaaatagatgaagttggttcagctgatgaagtcgatagaagtgtgatccatttgaac
aactgcattgtcctataccacttgcaccagtatcgggcggctttatcactgctggagaaa
atgtacactggtttagaatccctggaggaaagtgttggtataggtgtgtgtcttttgatg
gcagaatgttatcttggtgtgtatcagccagagaaagtgttaccagttattgcccacaca
gaaacaacatttcttccacaacctcttccacacacaccttctccaaagcaacctccacca
caagaaaaagaaaacaagtcacctgaaaagactggtgtttctactggcagtggttctaat
ggaaatagcagcagtagtagcagtagcagtagtagtagcagtagtagtgcagcagcagat
gaaatacgttgcagtgccacccaagaacagttacgaggtaaacttcaacagcttagagta
cgggctatgctgatgatgagatcattgcgtgttgctaagaaggaattaaaaacaattgta
actcatgcagttagtgcaggaaaatctttgaatgtaacactcgttagtttaaaaagtcag
ttagaatatcttagaggaaactttcggaaggccattaaagtcctaaatcagtgtgctgca
atacctgctcctagtcttacatatggccctagcttaggtgtaatgtattacaataatcta
ggtgtaattcaccttggcctaggaaaaccaacagttgcttgtctttatcttcaaaaggcc
ttacaagaaacacagacattaggtgacacagaatcctcagagacttcaggagactggtta
tcaacacgttcaatttatcagctcagtagtaatgtacagtcggaactttattacaattta
ggtgttacattacttcatatgaataaacctgataaagcatttgacttccttctagaagtt
ttacaagtacattccacaaatcctcgcttatggctacgacttgcagaatgttgtatagct
gtacacaaattgtgccttaaggatgacataagcatcaggaagtctgtagtccagggaact
gtaggtgttggtatacacagaaaaatctgcattgctacgtgtattgacagtcataataag
aaaaaggatctggaatccgcctcagatgctgcatttccagagccaacgttggagtttggt
cgactatgccttcgtaatgcccttgtactactaccagaaaatgcttctacaacaccgctc
acagatgaacaggaggcatcaggagtcatgcctgagctgtatccagcagggccttcttct
ccgttacgagggactgaagtggtcagcctccgtgtttcagcacttgcttgcagtgcctat
gtgtgcctctgcttatctgatcattcagctgccctacggcatgcagaaaccttattagtt
gctcatccaaaaatacctggtgtctataagttattaggacatttatatgctggtgaagcc
ttgatttgtttaggaagggtgtcagaagcagttacacactttgatcccaggcaaattgga
gacctttcactctcttcctcttcacaggatgtaaatcaaagtcctcctcttttgttacca
aacgatagctggtattcagggaacctatctactgcgatgcaagtaatgcgatataacctt
agtgttgcgtatgctttacgaggagaatttgataaagccagcaatatactaaaagaggtg
tggacggaaaggaatgggaatatgcctccacaagttatcatgttggccatgtacattcaa
ctgcaaatgggtcatgcagatgttatgaagaatattgtcaagaagaatatattgcttact
tga
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