Macrobrachium rosenbergii (giant freshwater prawn): 136836383
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Entry
136836383 CDS
T10429
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup153-like
KO
K14296
nuclear pore complex protein Nup153
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03013
Nucleocytoplasmic transport
mrj03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136836383
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
136836383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrj03019
]
136836383
Messenger RNA biogenesis [BR:
mrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136836383
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Nup153
DUF7129
Motif
Other DBs
NCBI-GeneID:
136836383
NCBI-ProteinID:
XP_066956677
LinkDB
All DBs
Position
56:complement(77469418..77514142)
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AA seq
1455 aa
AA seq
DB search
MASEGPRKFREKKKRASKPYDRPKGIIRRVTDSVTGLFSSSWLSGWMAGEEEEEAGDSQQ
AGSSRVASQVKTMAPPGESFIFAQPVTGRRPFRPIYPEEGEIDGNNQHAHGVNVGASTSS
GVRLNLTTATSVAIPTASSVPLSSENPSPVLLGRRHPIISTTPSQMFSTRTKSQLEPRPA
PLLTSSTPTGDDGSEFSESSADTGVDASVIPRPDERDYQREILQLDDESLQTLRESLAKP
ALAPPVAQPASALPSIEETRKRPRDIEADQTSLRAEGSLSNRSLFSDSGDVPLSQPSALP
KPLKTKTRFNISAYGSPLMFEKSVLSDSSFKMSPFYPGKTMFGGASAYRRRQVRSQTPRV
QVKPKPAQTPDDGGLSRSARRILECLEQMSTPISDAKRIPTPVPGQRGSFLDTTSGYTAV
YHRHRPPSRTPGPPVYKQSTPAKVSVAEKFAITTHSTSNASASGVDSSPLVTAAAVASAA
SGSDTSRVEVGGASASEGKVDKQPDNVEFLSVFSKAVSEATANMKSTSKSGASLPTFVFA
PKPPEVTAAFASGSRKVGGKVKSKVVNSGRTSIRPDDDIDGPEDPNLPAVTLTMSSLPKI
DFTSAINSSPASKAPSANSEGFKFASPEVVHGGSKVSSDVSTSLPVFTFSSPAAVGHENV
NDLDSPALAVPSVPLLFNCSSGSAPKLKEVIKKDKTSSVSELKEGSILDVLKPKRASPEK
TVKENSVTPFFNNIDTKSVVTDSSIMKNTENNSGSGVEQNSIINNVSKKTESYQVFQGFS
SFMKSSDEWECSVCMIRNKNTAEKCIACETSKPALNSVSNAGSQIANAVVEPPPPALNSI
AGGWGNAFKKSDNEWECETCMIRNKDTSDKCVACETPKPGSRSEPLSQDNVSKVLENKEE
KTNLGFGSMFAKAKGEWECATCLVRNNSDTSKCVSCETPKPGAVAVSQAITGNFRFGVNT
NDSSTSSTFKFGVSDSQSEVKSMGFRFGVSAKNTDESNSKVSGGFKFGVSEEVNKSSLTE
SSKDVASDKSKENSECVSSSSSSSSSTGFTFGVKSTDKTKETDSKVPNFNFSSNKLIENK
TDSENAIKTGFNFKVVSPDTPFSFGVGLKRKTDRDDKNNSTEIKPPAELKSGSVADVLKP
KEPSTGVFTFGNKIEKPEGDSVTKLPVFNNALSSLHNDGESKNATPTFGSSKVSASLIFG
SKTGESTSITGNSFSIVTEVSKANALPSFPFSSPVNEETKTAASMPSFTFGSKPESADSE
EPSKKLAFGSSSTLTNNNVNSKTPQLFTFGSKENTLTGFGPSPTSTPAFGAPAPTCNVGS
TFQFGHNNNPVPAATAPAPSFGNAAAAPAFSGTAAFGSNNSTSSFAFGQGPKKSAAGYDF
GQAASVANAFNFSGGDATASAFKFGQNTGDASSRIFQFGAGSTPVEAPAFGADNPYAAPA
PPSGRVVKKARRRKQ
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggaggggccgcggaaattcagggagaagaagaagagggcgtcgaagccctac
gatcgacccaagggaatcatccgccgtgttaccgattcagttacgggccttttttcgtcg
tcatggctgtcggggtggatggctggggaagaggaggaggaagctggcgactcgcagcaa
gcaggttcgtctcgagttgccagccaggtaaaaacgatggctccgcctggcgagtctttc
atttttgcccagccagtcacaggtcgtcgcccgtttcgtccaatctatcctgaagaaggt
gagattgacggcaacaaccagcatgcacatggtgtgaatgttggggccagcacaagcagt
ggggtgcgattgaatttaactacagccacttctgttgctatccctactgcatcttcagtt
ccgttaagtagtgaaaatcctagcccagtattattgggccgaagacatcctataatatcc
acaactccctctcaaatgttttctactcgtactaaaagtcagcttgaacctcgtcctgcg
ccacttcttacaagctccaccccaacaggtgatgacggcagtgaatttagtgagtcgtcg
gcggacactggtgtggatgcctctgtaattccacgtccagatgagagagactatcaacga
gagatactgcagctagatgatgagagtttgcagacattgagagagtctctggccaagcca
gccctagctcctcctgtcgcccaacctgcaagtgccctgccatctatagaagaaacaaga
aaaagaccccgggacatagaagctgatcaaaccagtttacgggctgaagggagccttagc
aataggtcgttatttagtgactctggtgatgttcccctcagtcagccctcagcccttcca
aagcccttgaaaacaaagacaagatttaatatatcagcgtatggatcaccacttatgttt
gagaagtctgttttgagtgattcatcatttaagatgtcaccgttttatcctgggaagact
atgtttggtggtgcttcagcgtacagaagacggcaagttcggtcacagactccaagagtt
caggtgaaaccaaagccagcacagactcctgatgacggagggttgagtcgatctgctcgc
cgtattcttgaatgtctagaacaaatgtccactccaatatcagacgcaaagcgaatacca
actccagtaccaggacagaggggtagttttttagatacgacatcaggttacacagctgtc
taccacagacatcgaccaccttcaagaacacctggacctccagtttacaagcagagtacc
ccagcaaaggtgtctgttgcggaaaagtttgccatcaccacgcacagtacaagtaatgcg
tctgcaagtggtgttgacagtagcccacttgtcaccgctgcagctgtggcctctgccgcc
tcgggttcagacacatccagagtagaagtgggcggtgcatcagccagcgaggggaaggtt
gataagcagccagacaacgtagaattcttatcagtgttttcaaaagcagtttctgaggca
acggcaaacatgaaatccacaagcaaaagcggtgcctctcttcctacatttgtatttgct
cctaagccaccagaagtaaccgctgcatttgcaagtggctccaggaaagtaggggggaaa
gtaaagagtaaagtggtcaacagtggcagaacatccattagaccggatgatgacattgat
ggccctgaagatcccaatttaccagcagtaacccttactatgtcatcccttccgaagatt
gattttacctcggctattaatagtagtcctgcttcaaaagcgccttctgcaaactcagaa
ggatttaaatttgcatcaccagaagttgttcatgggggtagtaaagtctcttcggatgtt
tcgacgagcctgcctgtatttacatttagtagcccagcagcagttggccatgaaaatgtc
aatgacttagactctcctgctctagctgttccgtcagtacccttattattcaactgcagc
tctggctcagcacccaaattaaaagaagttattaaaaaggacaagacctccagtgtatca
gaattgaaggagggaagcatattggatgttctaaaaccaaagagagcatctccagaaaag
acagttaaggagaattcagttacaccattctttaataacatagatacgaagtctgtggta
acagactcctccataatgaagaacactgaaaacaattcggggtcaggtgtagaacaaaat
agtatcattaataatgtgtccaagaaaaccgagtcctaccaagtgttccaagggtttagt
tcttttatgaaatccagtgatgaatgggaatgtagtgtgtgtatgattagaaataaaaat
acggctgaaaaatgtatagcatgcgagacttctaaacctgcacttaattcagtttcaaac
gctggcagtcaaatagctaatgcggtggtggagccgccgccacctgcattgaatagtata
gctggagggtggggtaatgcgtttaaaaagtctgataatgaatgggagtgtgaaacgtgt
atgattagaaataaagacacaagtgataagtgtgttgcgtgtgaaacccctaaaccaggt
agtagaagtgaacctttatcacaagacaatgttagtaaagttttagagaacaaagaggaa
aaaactaatttagggtttggctccatgtttgccaaagcgaaaggtgaatgggaatgtgcc
acgtgtttagtccgtaataacagtgacactagtaaatgtgtatcttgtgaaactcctaag
ccaggtgctgtggctgtgtcccaagctataacaggtaatttcaggtttggtgtaaataca
aatgactcttccacaagttctacttttaagtttggtgttagtgactcacagtcagaggtt
aaatctatggggttcagatttggggtgagtgccaaaaatacggacgaaagtaatagcaaa
gtaagtggtgggtttaaatttggtgtgagtgaggaggtcaataaaagttctttgactgag
agttcaaaagatgttgcaagtgacaagtcaaaagaaaattctgagtgtgttagcagcagc
agcagcagtagtagtagtactggttttacatttggcgtgaagtccacagacaaaacgaaa
gaaactgatagcaaagttccaaattttaatttttcttcgaataagttgatagaaaacaaa
accgattcagaaaatgccatcaaaactggttttaattttaaagtggttagtccagataca
ccgttttcttttggggtagggttgaagcgaaaaacagatagagatgataagaacaattcc
actgaaattaaacctcctgcagaactaaagtcagggagtgtagcagacgttcttaaacca
aaggaaccttccactggtgtattcacatttggaaataaaatcgaaaagcctgagggggac
agtgtaaccaagctcccagtttttaataatgcattgtcttcgctgcataatgacggggaa
tcaaagaacgccactcccacctttggaagttcgaaagtgtctgcttcactcatctttgga
tcgaaaacaggggaatccacttctatcacaggtaatagcttctctattgtaacagaggtt
tcgaaggcaaatgctttaccttcctttccattttcttctcctgtaaatgaagaaaccaag
acggcagcatcgatgccatcattcacctttggctctaaacctgagtcagcagacagtgag
gagccttccaaaaagttagcctttggatcatcaagcaccttgactaataacaatgtaaac
tccaaaaccccccaactcttcacttttggaagcaaagaaaataccctgacaggttttgga
ccatcccctacatctacaccagcctttggagcaccagcaccaacgtgtaatgtagggagt
actttccagtttggacacaataataatcctgttccagctgccacagccccagctccctcc
tttggtaatgcagcagcagctcctgcatttagtggtacagctgcatttggtagcaataat
tcaacgtcatcttttgcatttggacaaggtcccaagaagtcagctgctggttacgatttt
ggtcaggctgcttcagtggcaaatgcattcaacttttctggtggagacgccactgcttca
gcattcaagtttggtcagaacaccggggacgcatcctccaggatatttcagtttggtgct
ggaagtacgcctgtagaagcccctgcttttggtgcggataatccctatgcagcgcccgca
cctccaagtggccgtgtagtaaagaaagcaagaagacgaaagcagtaa
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