Macrobrachium rosenbergii (giant freshwater prawn): 136837231
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Entry
136837231 CDS
T10429
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
mrj
Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrj03019
]
136837231
03041 Spliceosome [BR:
mrj03041
]
136837231
Messenger RNA biogenesis [BR:
mrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
136837231
Spliceosome [BR:
mrj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
136837231
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_MUD2_C
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
136837231
NCBI-ProteinID:
XP_066958092
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All DBs
Position
1:53500435..54161707
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AA seq
377 aa
AA seq
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MLATMATLMMPAPAPTMAMNPPALPLTPAKHDNTLKNNAHNNNNGQKQGTPICAAVCLAP
SRNKHYHIFVGDLSPEIETNTLREAFAPFGEISDCRVVRDPHTLKSKGYGFVSFIKKADA
ETAITNMNGQWIGSRNIRTNWATRKPPAPKNNDANQKPLTFDDVYNQSSPTNCTVYCGGI
TNGLSEELMQKTFAPYGQIHEIRVFKDKGYAFVRFSTKESATHAIVSVHNSEINGQPVKC
SWGKESGDPNNTPVTTQVMTLTDVSECLSLQPLPGSQYPYNYAGQMGYWYPQGYPAQVQG
QQFLGMQGFAYGQYGYQQGMAGMPGVPTWQGVPQPQLPTGQMAQLQQPTSMVGAYPVQQF
QLSSPYLLGSTPGTLVQ
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgctggctacaatggccaccctgatgatgccagcgcctgccccaaccatggccatgaac
ccgcccgcgctgcccctcacccctgccaaacacgataacacgctaaaaaataacgcccac
aacaacaataatggtcaaaagcaaggaacgcctatctgtgccgccgtctgcctcgccccc
agtagaaataaacactatcacattttcgtcggtgacttgagcccagagatcgaaacgaac
actctgagagaggccttcgcgccgttcggagaaatttcagactgccgtgtggtacgagac
cctcacaccctcaagtctaagggatacggctttgtgtctttcattaaaaaagcggacgct
gaaactgcaatcaccaacatgaacgggcaatggattggctcccgcaatatccgaaccaac
tgggcaacccgtaagccgcccgcgcctaaaaataatgatgccaaccagaagcccctgaca
ttcgacgacgtctacaaccagtcgtcacctacaaactgtaccgtctactgcggaggcatc
accaacggcctttcggaagagctcatgcagaaaactttcgcgccttacggacagatccac
gagatccgggtcttcaaagataaaggatatgcattcgtaaggttttcaacgaaggaatca
gctacacacgccatcgtgtctgtgcataactccgagatcaacggccaaccagtcaaatgc
tcgtgggggaaggaatctggtgaccctaacaacactcccgtcactactcaggtcatgacg
ctgaccgatgtgtccgaatgcttgtctttgcagccgctgccggggtcgcagtacccgtac
aactacgccggccagatgggctactggtaccctcagggctacccagctcaggtgcaggga
caacagttcctgggcatgcaaggcttcgcttacggacagtatggctaccagcagggaatg
gcggggatgccaggtgttcccacttggcaaggagtaccccagcctcagctgcccactggt
caaatggcacaactccagcaaccgacatcgatggtgggagcttaccccgtacagcagttc
cagctgtcgagcccctacctcctgggcagcacccccggcaccttggtgcagtaa
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