Macrobrachium rosenbergii (giant freshwater prawn): 136837370
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Entry
136837370 CDS
T10429
Symbol
DNAlig3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
136837370 (DNAlig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrj03400
]
136837370 (DNAlig3)
Enzymes [BR:
mrj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
136837370 (DNAlig3)
DNA repair and recombination proteins [BR:
mrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
136837370 (DNAlig3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
zf-PARP
LIG3_BRCT
DNA_ligase_A_C
BRCT_2
BRCT
RNA_ligase
mRNA_cap_enzyme
zf-CCHH
PTCB-BRCT
Podovirus_Gp16
Motif
Other DBs
NCBI-GeneID:
136837370
NCBI-ProteinID:
XP_066958229
LinkDB
All DBs
Position
59:complement(10392900..10440484)
Genome browser
AA seq
1050 aa
AA seq
DB search
MTILPALLRCGLLKRTLLFTNAYTVAGNSDVALISSWHNLPNTFDQFGIRRNLRSRLYYH
KSSWLFPHTLLSANMSSLPFCADYDKRGAAKCKKCKEKIEKGQLRIGKITANPFTESGGD
MKLWHHLECIFETFKRARATTKKIEDPYDDIEGFADLEEDDKKKINAMIDDFQNSVKEKA
TPKKQAAQKKTPQKQTPKKQTPQKDTPRKQVTTIPKTTKPSGTPTKSEDASSSRGPPPPR
NDPGMDRTHKDNSFREFRRICANVADEPSYLGKTEIISKYLKYGTNKNKFEGDLRLWVKL
LLPGVIKRVYNLQSKQLVKLFSQLFNSNQEEMLEDLEKGDVAETVRVFFEMSSVLGPVKK
SSLSIQEVDELLEELSGMTKEDEHSYVLKKICKRCTGNDLKMVVRLIKGDLRINAGAKHV
LDAVHSDAYEAFQTTRNIDAVLDQVIKVSATGGSLKFTAEVMTPVLPMLAEACKSVDYAF
KKCLSGAMYAEIKYDGERVQLHKKGNKFKYFSRSLKEVMPHKVSHFKNYIPQAFPHGEDL
ILDAEVLMIDNKTGTPLPFGTLGVHKKAEFQDANVCLFVFDCIHYNGQDLMDKPIKERRE
ILEEHMTEIKNHIMFSEMKLITKKEDLRNMINDVLKQGLEGLVLKDINSIYEPGKRHWLK
VKKDYLNDGAMADTADLVVLGAWYGTGKKGGMMSVFLMGCFDQRINKWCTVTKVHTGHDD
ATLARLQDELDVVKISQDFDRVPSWLKCTKSMVPDFVCADPKKAPVWEITGAEFTRHQIH
TADGISIRFPRVTKIRNDKSWQEATTLSYLQELYKKSREYGDLEVLGSDDTDRIDDDGDG
DDDGDGNDSNSRCSGGDLSTSVRTSDSTPSPSSSSKTKAKVQQTMKTFVRGSPELKQTVS
KNKKTDIKSEHHSSKRKTDDSYVHVPVTKKLCKYGSACYNDNSAHLMMYGHPETPRTKIP
TVNPLPDFLTGVMVSIPSPLEKRNLLQRYVVAYGGEVLPEFRSSEATHIIINEKDSSAKA
SSSEGLLVSPDWLWDSIKLQKLLPTRPYNA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgaccatattgccagctttactccggtgtgggcttctaaaaagaactttactcttcact
aatgcttacacagttgctggcaattctgatgttgcattgatcagttcatggcataattta
ccaaatacttttgatcagtttggtatcagaagaaacttaaggagtcgtttgtactaccac
aaatccagttggttgtttcctcatactttgctgtctgcaaatatgtcatccctgccattc
tgtgctgattatgataagagaggtgcagctaaatgcaagaaatgcaaagaaaaaattgag
aaaggtcagctgcgtatcggaaagattactgccaatccctttactgagtctggaggagat
atgaagctttggcatcatttggaatgtatttttgagacttttaaacgggcaagagcaacc
acaaagaaaattgaagatccatatgatgatatagaaggatttgccgatttagaagaggac
gataagaagaaaattaatgcaatgattgatgatttccaaaattctgtaaaagagaaagca
actcccaaaaagcaggcagctcaaaagaagaccccacagaagcaaactccaaagaagcag
actccacaaaaagacacaccgcggaaacaagtcactactattccgaaaacaacaaagcca
agtggaactccaactaaatcagaagatgccagttcatcaagaggaccaccaccaccaaga
aatgacccaggtatggacaggacccacaaggacaactcttttagagagtttcgtcgtatc
tgtgcaaatgttgcagatgaaccaagttacttaggaaagactgaaatcatttccaagtac
ttgaaatatggaactaataaaaataagtttgaaggtgatttgagactgtgggtcaagtta
ttacttccgggtgtcatcaagagagtttacaacttgcagagcaaacagctagtcaaattg
ttttctcagctgtttaatagtaatcaagaagaaatgctggaagatttagaaaaaggtgat
gtggctgaaacagtgagagttttctttgaaatgtcctctgtgctgggtccagtcaagaaa
agcagtctctcaattcaggaagttgatgaactgttggaagaactctcagggatgacaaag
gaagatgaacactcctatgtcctgaaaaagatatgcaaaaggtgtactggcaatgattta
aaaatggttgtaaggcttattaaaggagacctgaggatcaacgcaggagcaaaacatgta
ttagatgcagtgcatagtgatgcatatgaagctttccagactactcgaaatattgatgct
gtcttggatcaagtcataaaagtcagtgccacaggaggtagtctcaagtttacagctgaa
gtcatgacacctgttctacctatgcttgcagaggcatgtaaatcagtcgattatgctttc
aaaaagtgtctaagtggggcaatgtatgccgaaatcaaatatgatggagaaagagtacaa
ttgcataagaaaggcaacaaattcaagtatttttcgcgttcactgaaagaagtaatgcca
cataaggtttcccattttaaaaactacattccacaagcttttccacacggtgaagacctt
attcttgatgcagaggtgttgatgatagataataagactggaacaccattaccatttgga
acactgggtgttcataagaaagcagagtttcaagatgctaatgtatgcctttttgtattt
gactgtattcattacaatggacaagatttgatggataagccaataaaagaacgacgagaa
attctggaggaacacatgactgaaataaagaatcacataatgttttcggaaatgaagtta
ataacaaagaaggaagatctacgtaacatgataaatgatgtcttaaagcaaggtttggaa
ggattagtgctcaaggatataaatagtatttatgaaccaggaaaacgacattggttaaaa
gtgaaaaaagattacttgaacgatggagcaatggcagatactgcagatctggtagtttta
ggggcttggtatgggacagggaagaaaggtggaatgatgtcagtatttttgatggggtgt
tttgatcaaagaataaacaagtggtgtactgtaacaaaggttcacactggtcatgatgat
gcaactttggctcggttgcaggatgagcttgatgtggtcaaaattagtcaagattttgat
cgtgttccatcatggttgaaatgcactaaatctatggtacctgattttgtttgcgcagat
cctaagaaagctccagtttgggaaatcactggcgcagaatttacaaggcatcagattcat
acagctgatggaatttctataaggttcccacgggttacaaaaattcgaaatgacaaatct
tggcaagaagctactacgttatcatatctccaggaactttataagaaatcccgtgaatat
ggagacctggaagttttgggatctgatgatactgacagaattgatgacgatggtgatggt
gatgatgatggagatggaaatgacagtaacagcagatgttctgggggggacctatctacc
tccgtcaggacttctgacagtactccttcacccagtagctcatctaaaaccaaagctaag
gtacaacaaacaatgaaaacattcgtcagaggcagtcctgagctgaaacaaacagtatcc
aagaataaaaagactgatatcaaatcagaacatcattctagcaaaagaaaaacagatgat
tcatatgttcatgttccagtgaccaaaaagctttgtaagtatggctcagcatgttacaac
gacaactctgcacatcttatgatgtatggccatccagagactcctcgtacaaagatacca
actgttaatccactgccagattttttaacaggagtcatggtcagcatacccagtcctcta
gagaaacgcaacttactacaaagatatgttgtagcatatggaggagaagtattgcctgaa
ttccgttccagtgaagcaactcatatcataataaatgaaaaggattcatctgcaaaggca
tcatcatctgaagggttattggtatcacctgactggctttgggacagcattaagcttcag
aagcttctcccaactagaccttacaatgcttag
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