Macrobrachium rosenbergii (giant freshwater prawn): 136839494
Help
Entry
136839494 CDS
T10429
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
136839494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mrj03009
]
136839494
Ribosome biogenesis [BR:
mrj03009
]
Eukaryotic type
Pre-60S particles
GTPases
136839494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
GTP_EFTU_D2
EF-G_D2
EFG_III
EFG_IV
MMR_HSR1
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
136839494
NCBI-ProteinID:
XP_066961732
LinkDB
All DBs
Position
6:43324612..43339750
Genome browser
AA seq
1104 aa
AA seq
DB search
MVAGQQDQRSNAYALMENPHNIRNLCIMAHVDHGKTSLADNLVASNGLISQRLAGRIRYM
DSRKDEAERGITMKSSCVSLAYSKGDEKYLINLIDSPGHVDFSSEVSTAVRLCDGTIIVV
DVIEGVCAQTKVVLQQAWVENIQPVLVLNKIDRLILETKLSPIDCYYHIAQVLEQVNAYM
GELFNTTVLGKTAEGVERRQQAERERRLSERKISESETAPEAKQIFSDWGIDQVDDSDLY
FTPEQGNVIFASAYDGWGFSIAHFAEQFANKLGMNRTVLNKTLWGDYYISSKGGEKKIMR
GARDKRKNPLFVSLILENLYKVYDTVMSKKDNIELEKLAGCLGVKLPVHVLKSTDIRAKL
NMLCNKWLPLAPAVLEMVVEHLPSAASISKERAMKLMCSATQRFDSLPEKSQELQNAFVK
CSSDENAPLIVYVSKIFCVPRKHFQDEKSEGNKGFHVQNVKSSISEEEMAKRREEARRMK
EAATGNSDDSKGKELSSEEMAEIMRQQQEKLADKEREREEKQKLLEEEVFVAFARVYSGA
LKPGQKVYVLGPKHDPSKIINMLDNGELTEEQLKDNIHVHIGQVKGIYLLLGRELEPLEC
ATAGTVIGITGLEDQIIKSATISSTPVMPAFTELTQNATPILRVAVLANVKDLPKLRAGL
KLLNQADPCVQVSLQRSGEYVIVTAGEVHLQRCIDDLQERYAGVPVQVSDPIVPFRETII
EKPKVDRLNEAIEGENVNTKVEDEDPLGRVEINGSVGRLLCRAAPLPESVTKLLDQYKDL
LHLITNKAGSVVAGENIETVAESNGMEGKPDLESTQKAQENLSNVTLKAMSELRFQLDKA
FKEAGSEWENAVNEIWSFGPDGCGPNVLLNRIGAYKRPSIWDKATAIDSPLAAYDTNFVT
GFQLATAAGPLCEEPMMGVCFIIEDWSLPQKECDTKQFGISAGQIISLSKDTLRKAFEKQ
CQRLMCAMYSCVISVTSEVVGKMYNVIGKRQGRIVSGDITEGSTSWNVTAYLPVIESMNF
ANELRKSTSGEAIPQLVFSHWEVLDVDPAWEPQTTEELAHWGEKSDSENIAKNYINSVRK
RKGLATDEKIIEYAEKQRTLSKNK
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggttgcggggcagcaagatcagagaagtaatgcttatgcattgatggaaaatcctcac
aatattcggaatttgtgcatcatggcacatgttgatcatggaaagacttcccttgctgat
aatcttgtagcgtcaaatggtctcataagtcaacgcttagcaggacgcatcagatatatg
gacagccgaaaagatgaagcagagcgtggcattacaatgaagagttcgtgtgtgtcactt
gcgtatagtaaaggtgatgaaaaatacttgattaaccttatcgattcccctggtcatgta
gacttctctagtgaggtgtctacagctgttcgtctctgtgatggaacaataattgtcgtt
gatgtgatagaaggtgtttgcgctcaaacaaaggttgtcttacagcaggcttgggtggag
aatatacagccagtgcttgtcctcaacaagattgacagattgatcttagagacaaaacta
agtcccattgactgctattatcacatcgctcaagttttagaacaggtgaacgcttacatg
ggggaattgttcaatacgacagttttaggaaagactgcagagggggtagaaaggcgtcaa
caagcggaacgggaaagaagactctcagaaaggaaaatctcagagtcggaaacagcacca
gaagccaaacagattttttcggattggggaattgatcaagttgatgactctgacctttat
ttcactcctgagcaaggcaatgtcatatttgccagtgcgtatgatggctggggttttagt
attgcccattttgctgaacagtttgcaaataaattggggatgaacagaactgtgttgaat
aaaacgttatggggcgattattacatctcttccaaggggggtgagaagaaaataatgagg
ggtgctcgagataaacggaaaaatcccttgtttgtgtcccttatcttggaaaatctttac
aaagtttatgatactgttatgagcaaaaaggataacattgaattagaaaaacttgctgga
tgtttaggagtcaaattgccagttcatgtgctaaagtctacagatattcgagcaaaattg
aacatgctgtgtaacaagtggcttccattagctccagctgtcttagaaatggtagtggaa
catttgccaagtgcagccagcatcagtaaggaaagggctatgaaattgatgtgttcagcc
actcagagatttgattcgcttccggagaagagccaggaacttcaaaatgcatttgtgaaa
tgttccagtgatgaaaatgctcctcttattgtttatgtgtcaaagatattttgtgttcca
aggaaacacttccaagatgaaaagtctgaagggaataaagggttccacgtccagaatgta
aagagttcgatttcagaggaggagatggctaagcgcagggaagaagctcgtcgcatgaaa
gaggcagcaacgggaaattctgatgattccaaaggaaaagaattgtcttcagaggagatg
gcagagatcatgagacaacagcaagaaaaattagctgacaaagagagagagagagaggag
aaacagaaactcctagaagaggaggtgtttgtggcctttgcccgagtttatagtggtgct
ctgaaaccaggtcaaaaggtatatgtattaggccccaagcatgatcccagtaagataatc
aacatgcttgacaatggagaacttactgaagagcagttgaaggataacattcatgttcac
attggccaggtgaaaggtatttatctacttctgggacgtgaactagaacctctagagtgt
gcaactgcagggacagttattggcattactggtttagaagaccagatcataaagagcgct
accatctcctctacccctgtaatgccagctttcacagaactgactcagaatgcaactcca
attctaagggttgcagttctagcaaatgtcaaggacctcccaaaactgcgtgctggttta
aagctcctcaatcaagctgatccttgtgtacaggtgtcgttacaaagaagtggtgaatat
gtcattgtgacagcaggcgaagtacatctgcagcgatgcatagatgatcttcaggagcga
tatgctggtgttccagttcaagtatcagatcccattgtacctttcagagaaactattata
gaaaaaccaaaagtggatagactgaatgaggctattgaaggggaaaatgtcaatacaaag
gtagaagatgaagatccactgggaagagtggagataaacggtagcgttgggaggcttctt
tgcagagctgcaccattgccggaatctgttacaaaacttttagatcaatataaagacctc
ctgcatttaattactaataaagctggctctgttgtagctggtgagaacattgaaactgta
gctgaaagtaatgggatggagggaaaacctgatcttgaatcaacccagaaagcacaagag
aacttgagtaatgtcactttaaaggcaatgagtgaattaagatttcagcttgacaaagct
tttaaagaggcaggttctgagtgggaaaatgctgtaaatgaaatttggagttttggtcca
gacggttgcggacctaatgtcctgttgaaccgcatcggagcatataaaaggccatcaatt
tgggacaaggcaacagccattgattccccattagctgcttatgatacaaactttgtcact
gggtttcagttagcgacagctgctgggcctctatgtgaagagcctatgatgggcgtttgt
ttcataatagaagattggagtttgcctcaaaaggagtgtgacaccaagcaattcggtatt
tcagctggacagataatttctctttctaaagacacattaaggaaggcctttgagaagcag
tgccagaggttaatgtgtgcgatgtattcatgtgtgattagtgtgacatcagaggtagtt
ggaaagatgtacaatgtcattggaaaaagacaaggaagaattgttagtggggacataacg
gaaggatcaacgtcatggaatgtaactgcctaccttcctgttattgaaagcatgaacttt
gctaatgaacttcggaaatctacatcaggtgaagccattcctcaacttgttttctcacat
tgggaagtactggatgttgacccagcttgggagcctcaaactacggaagaattagcacat
tggggagaaaaatctgacagtgaaaacattgccaaaaattatatcaattccgtgagaaag
agaaaaggactcgcaacagatgagaagatcatcgaatatgctgaaaaacagagaacttta
tcaaagaataagtaa
DBGET
integrated database retrieval system
