Macrobrachium rosenbergii (giant freshwater prawn): 136840220
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Entry
136840220 CDS
T10429
Name
(RefSeq) homeobox protein cut-like isoform X1
KO
K09313
homeobox protein cut-like
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mrj03000
]
136840220
Transcription factors [BR:
mrj03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
136840220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
HNF-1_N
DUF349
Motif
Other DBs
NCBI-GeneID:
136840220
NCBI-ProteinID:
XP_066962876
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Position
7:complement(20100418..20618844)
Genome browser
AA seq
1510 aa
AA seq
DB search
MAAPGPDAQGGAGADTPGKDMAALHNLQSMDWLFKKERIFLLAQFWQQRATLAENEVHTL
KEQLESVKCQKALKESNNNNNSNNNNNNNNNNNNNDINSTNSNNINTTTTTTTTANSESG
NEVVESSETSSSERNERATPVEELIQSKEKEVREASSSISVSSLSTDEVSKLVEDISRLQ
AALSGVKEATAAQVHAMEEQLEQKNRLIQRLESKLEHSSLEEAKRDLQNIREGRMGQENL
AFPPRSLESLLVDRAKTEHDLKIPTSEFGKQLYDVYGPLPPMGHGHLHPPLRPHLPPPLA
PPPMASPLQPLAPHPPPGTPLHHLLGEEWRRSLERTVVDRHHLTSGQISPDSGGGPVERS
DSRDSPLGDVNMKSPSSLANGFPHENKSPFQTRDDRSPFKDDLPPMAFKFEDRITGESLI
PKGDPMEARLQEILRFNMEKFCQQSLDTLTLARRVRELLSIHNIGQRLFAKYILGLSQGT
VSELLSKPKSWDKLTEKGRDSYRKMHAWATDDNAVFLLKSLIPKKACRRKPESCQMPNGL
LTGSHKDSVGGFRGPDDTVTEERIQHILSEASRAMTSSSISSQQGQQDQDTRSTDSKSPA
SSTHSPSSPLSRDGRPRGLRKFDNDDIPQEKVARIYQEELVKLMSRPHEPPLPLPRDPQY
PGILFPFLGQSLLFNRSPEEVKLALDAYHQELSKLQGAAATGMGLGATGLGMGGAGGLGL
GAGGSLGMGVGLGAGGLHNGAQDLSLPKRESRGGEDDDESRNPSVTSPFGPTRSKAETSL
STATPLSNLVTPITSIAASSGDDLSVSASPLQRMASITNSLITGPQISSSQPMSQKPLKA
ILPPITQQQFDQYSNMNTEEIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKP
WHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYTAPPLYLVGGCPLP
GGPSAPPGAQFPGGLSTSGSTTFPSYTKGTSKPLLKLPADIPKSMESPLPPVGIPPSLGS
LPLPSHPVSFDTRMPILDPLRKTTLGGVRAPGPVAPSVYEMAALTQDLDTQVITTKIKEA
LLANNIGQKLFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDPRNLEKL
QMLKNERREANKRRRALDPSADVSQDSQDVFQAPSPGGSSKKQRVLFSEEQKEALRLAFA
LDPYPNLATIEFLAQELQLSTRTITNWFHNHRMRLKQYPGSPGDGTSPSRDPSQSPSQSQ
GQSFDPLQFRLLLSQRLLELRKEKGLPPTLPGLGPGLHPGLFPHFPPLGTPGLGGQHIER
DLSVAGLDLSMKGDNDYDDGSLDEDSNMSGAMSPSGGGRSEGEGDDRDGRGAPSPVARSS
RRKPAAPQWVNPSWASGECGKDREMIINGVCVMQTDDYRLDEQQETVRIEPTPVDEARAH
SVKEEDDEDDGDDDQQPASSQPSSSHPDSVKPEPVSTLQDDDESSALQEVPTPSRETVNE
ESDVKEEEEA
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccagggccagatgcccagggcggcgcgggggccgacacccccgggaaggat
atggctgcccttcataatcttcagtccatggattggctcttcaagaaggagaggatcttc
ctcctggcccagttctggcaacagagggcgacgctagcggagaacgaagtccacaccctg
aaggaacagctggagagcgtcaaatgccaaaaagctttaaaggagagcaacaacaataac
aacagtaacaacaacaacaacaataataataacaacaacaacaatgacatcaacagcacc
aattccaataacattaacacaaccacaaccacaaccaccaccgccaattcggagtctggc
aacgaggttgtcgaatcctctgaaacttcttcctccgagaggaacgaaagagccactccc
gtggaggaactgattcagtccaaagagaaagaggtacgtgaagcttcttcctccatctca
gtatcatcattatctactgacgaagtgtcgaaattagtcgaagacatctctaggctgcag
gcggctctgtcgggcgtgaaagaagccactgcagcacaggtccatgccatggaagaacag
ttagaacagaagaacagactcatccagcgcctcgagtcgaaactggaacattccagtctg
gaagaagctaaaagagatttacaaaatataagagaaggtcgaatgggccaagagaattta
gcgtttcctccaagatccttggagagtttattagtagacagagcgaaaaccgaacatgat
ctcaaaatacccacttccgagttcggtaagcagttatacgatgtatatggtcctcttccc
cctatgggccacggtcatctccacccacctctgaggccccacctccccccaccgcttgcg
cctccacctatggcgtctcccctccagcccttggcacctcatcccccgccaggtactccc
cttcatcaccttcttggggaggaatggcgacggtcactcgagagaacagtagtggatcgg
catcatcttacctcaggtcaaatctcccccgacagcggaggaggcccagtggagagatcg
gactcgagagattctcctctcggggacgtgaacatgaaaagtccttcttcgttggccaat
ggattcccccacgaaaacaaaagtcctttccagacccgcgatgaccgctcgcccttcaag
gatgacctcccacccatggccttcaaattcgaggaccgcatcacaggagaatcactcata
ccaaaaggcgatcccatggaggccagattgcaagagatattaaggtttaacatggagaag
ttctgccagcagagcctcgacacattaactctagctcggcgagtccgggaacttttgtcc
attcacaacatcggccaaagactctttgctaaatatatacttgggctgtcacagggcacg
gtctccgaactcctctcgaagcccaagtcgtgggacaaactgacggagaaaggtcgcgac
tcctatcgcaaaatgcacgcttgggccaccgacgacaacgctgtcttcctcctcaaatct
ctcattcccaaaaaagcttgccgtaggaaacccgaatcttgccagatgccaaatggtctt
ttgacaggatcccacaaggactccgtcgggggatttcgaggtcctgacgacaccgtcaca
gaggaaagaatacaacacatcctcagcgaggcttccagggccatgacgtcctcctccatt
tccagtcaacagggccagcaggaccaggacacaaggagtacagattccaagtctcctgca
agttcaacccattcacccagcagccccctctcccgcgatggtcgaccgagagggctccgc
aagttcgacaacgacgacattccccaagaaaaagtcgccagaatctaccaagaggaactt
gtcaaattaatgtctcgaccccacgaaccgcctctccccctcccgagggacccgcagtat
cctgggattctgttccccttcctaggacagtccttactcttcaacagatctccggaggaa
gtcaagctcgcccttgacgcttaccaccaggagttgagtaagctccaaggggcagcagca
accggaatgggtcttggcgctaccggtctaggaatgggcggggctggcggtcttggccta
ggagcaggaggttcactaggtatgggcgtaggtttaggggcaggtggtctccacaatggc
gcccaggacctgtcgctgcccaagagagaatccagaggcggcgaggacgacgacgaaagc
cgaaatcccagcgtcacatcacctttcggacccaccagatcaaaagcggagaccagtctt
agcacggctacgcctttaagcaacctcgtaaccccgatcacttccatcgcagccagctcc
ggggatgacctcagcgtgtcggcctcacccctccagaggatggcctccatcacaaactcc
ctcatcacggggccccagatctcatcgtcacagccgatgtctcagaagcccctcaaggcc
atcctaccgcccatcacacagcagcagttcgaccaatacagcaacatgaacactgaagaa
atcgtcaagaaggttaaagagcaactcagtcagtacagtatctcccaaaggttgtttggc
gaatcggtcctaggcctgtctcagggctctgtctcggacctccttgctcgacccaaacca
tggcatatgttgacacaaaagggccgggaaccgtttattcgaatgaaaatgtttctggaa
gacgataatgccgtgcacaagctggtggcatcgcagtacaagatcgcccccgaaaaactt
atgcgcaccggaggatatacggctccccctctgtatttagtcggtgggtgtccactcccc
ggggggccatccgctccccctggggcacaattccctggggggttgtccacttctggctca
actacttttccatcatatacaaagggtacgagcaagccccttctgaagcttccggcagac
atccctaagagcatggagtccccacttcctccggtggggatcccgccgtctttaggcagc
ctccctcttccttcacacccggtctccttcgacaccaggatgccgatcttagacccactg
aggaagactacccttggaggagtccgtgcaccaggacctgtggcgccatcagtctatgaa
atggctgcccttacccaggacttggacacccaggttatcacaacaaagatcaaggaggcc
ctcttagccaacaatataggccaaaagctgtttggtgaagcagttctaggattatcacag
ggctcagtatctgagctgttaagtaaaccaaagccttggcacatgctcagtatcaaaggc
agagaaccattcatccgtatgcagctatggctgaatgatccaagaaatctagaaaaactc
cagatgcttaaaaatgagcgacgagaagctaacaagcgacggcgagctcttgacccttct
gctgatgtctcacaggattcacaagatgtgtttcaggccccttcacctggcggttcatca
aagaaacaacgtgtacttttctcagaagaacaaaaagaggcactaagattggcatttgct
ttggacccatatcctaatttggctaccattgaattcctggcacaggaattacagctgtca
actcgcacaatcacaaactggttccataatcatcgtatgcgactcaaacaatacccagga
agtcctggcgatggcacctccccttctcgtgatccttcacagtcacctagccagtctcag
ggtcagtctttcgaccctctccagttccgcttgttactctctcagaggttgctggagcta
agaaaggaaaaaggactcccacccacacttcctggtcttggtcctggtttgcacccaggg
ctttttccgcactttccacctttagggacaccaggtctgggtggacaacacattgaaaga
gacttaagtgttgccgggctcgacttgtccatgaaaggtgataatgattatgatgatgga
tcacttgatgaagattccaatatgtcaggtgccatgagtccaagtggaggtggccgctct
gaaggtgaaggtgatgatagggatggacgaggggccccttctcctgtagcaagatcttcc
cgaagaaagcctgcagctcctcagtgggttaatccatcatgggcatcgggtgaatgtggt
aaagatcgtgaaatgattataaatggggtatgtgtcatgcaaacagatgactataggttg
gatgaacaacaagaaacggtacgtattgaacccactccagtggatgaagctcgtgcacat
tcagtcaaagaagaggatgatgaggatgatggagatgatgatcaacagccagcctcctct
cagccatcctcctcacacccagatagtgtaaaacctgaacctgtcagtaccttgcaagat
gacgatgagtcatctgcattgcaagaggttccaacgcctagcagggaaactgtaaatgaa
gaaagtgatgtgaaggaagaagaggaggcgtga
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integrated database retrieval system
