Macrobrachium rosenbergii (giant freshwater prawn): 136840266
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Entry
136840266 CDS
T10429
Symbol
spel1
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
136840266 (spel1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrj03400
]
136840266 (spel1)
DNA repair and recombination proteins [BR:
mrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
136840266 (spel1)
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
136840266
NCBI-ProteinID:
XP_066963014
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Position
1:38962745..38980554
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AA seq
923 aa
AA seq
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MASLQPKEFAIGLANRILLFLRNFQKSNTTVRIFDRGDYYTVHGPDAVLAAKELFHTNSV
IKLLGAGEKKVESVILSRLNFESFVRDLLLVKHYRIEVYKQKSGKNDWEAEYKASPGNLS
QFEEILFGGSSELNVTTGVMAVKLANESGQRIVGVGYVDTAGRAMTVSEFTDNEAFSNLE
ALIVQLGPKECLIAQGDLGPDGVKLKQVLSRSNMLVTERKKSEFSVKDADQDLNRLLRRN
DTGSVATRPEFDRVVALAALTVVIKYLELLNDEXNFQCLTLSQYDLSQYVRIDSAAVRAL
HVEPVGETLEVSGGASKTHTILGLLDKCRTPLGHRLLAQWLRQPLIDINKIEERQDLVEA
LVSSVDLRHSLGEEHLRSIPDLHRLARKLTRKAATLQDCYRFYVCVQRLPSMCEAIAKYE
GPHVTALAAVFITPLQELISDLSKYQEMIETTVDMEQAKLGEYVIKPDFDEKLAELCGKM
DELEADIQSQFRKAASDLGLEAGKSIKLESNAQLGYFFRVTLKEEKVLRNNRSYRMIDTN
KAGVRFRNSAMQDLNDQYTSCREEYGCQQKSVVNEILSIAGGYVEVIQQFGQIIATLDCV
FALATAAVSAPIPYVRPKLLPKGSGVMKLKGIRHPCLELQDEISYIPNDCTLNQSGGLFH
IITGPNMGGKSTFLRSVGAAALMAQIGSFVACDEAEISILDSILARVGAGDCQLKGVSTF
MAEMLETATILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIAKEIGAFCLFATHFH
ELTSLADEVDTVKNFHVTASTSHGALTLLYQVRPGPCDRSFGIHVAKLANFPDSVIEYAK
RKAGELEDEFCGDDDDESEEAVKRRKVEKREGEKLIETFLSKASALHNEGVDDEKLQQEI
SKLRQEVLSTNNAYISHLLSRET
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtttgcagccgaaggagttcgctatagggctggcgaacaggattctcctattt
ttgcgtaatttccaaaaatcaaataccacagtgagaatatttgatcgcggggattactac
acagtacatgggcctgatgctgttttagctgccaaagaactgttccacaccaattctgtt
atcaaacttttgggagcaggggaaaagaaggttgagtctgtcatcctgagtcgattgaat
tttgagtcctttgttcgcgatctgctccttgttaaacactaccgaattgaggtctacaag
caaaagtctggcaagaatgattgggaggctgaatacaaggcctcacctggcaatttatcc
cagtttgaagaaatcttgtttgggggaagcagtgagctaaatgttactacaggtgtcatg
gctgtgaaattggcaaatgaaagtgggcagaggattgtgggagtcggttatgtggacaca
gcaggaagggccatgactgtctcagaattcactgacaatgaagctttcagcaatttagag
gctctgattgttcagctgggacccaaagaatgcttaattgcacagggcgatttgggccca
gatggagtgaagctgaaacaggtactttcaagaagcaatatgctcgtcactgagagaaaa
aagagtgaattttcagtgaaagacgcggaccaagacctgaatcgtctcttgcggagaaat
gacactggctctgttgcaacaagaccagaatttgatcgtgttgttgctcttgcagcctta
actgtagtaatcaaatacctggagcttcttaacgatgaatagaactttcagtgtttgaca
ctctcccaatacgacttgagtcagtatgtgagaatagatagcgctgcagtcagagcactt
cacgttgagccagtgggagaaacactcgaagtttctggtggggcttctaaaacacatacc
attcttggccttttggacaaatgtcgaactccattgggtcatcgtcttcttgctcagtgg
cttcggcagcccctcattgacattaacaaaatagaggagcgccaggacctagttgaagct
ctggtatcgtcagttgacttacgtcacagcctgggagaagaacaccttagaagcattcct
gatcttcatagattggcacgaaaattgactcgcaaggcagcgacactgcaggattgctat
aggttttatgtttgtgttcaacgtttgcctagcatgtgtgaagccattgcaaaatatgaa
ggtccccatgtgacggctttagcagcagtgtttataacccctcttcaggaactaatatct
gaccttagtaagtaccaagagatgattgaaaccaccgttgatatggagcaagccaaattg
ggagaatatgttatcaagccagattttgatgaaaaacttgctgagctctgtgggaagatg
gatgaattggaagctgatattcagagtcagtttagaaaggctgctagtgacttgggcctg
gaagcaggaaagtccattaagctggagtcaaatgcacagcttggatatttcttcagagtt
actttaaaggaagaaaaagtcttgcgtaataataggagctatcgaatgatagatacaaac
aaagctggcgtgaggttcagaaacagcgccatgcaagatttgaatgaccagtacacctcg
tgtcgagaagagtatggatgtcaacagaaaagtgtggttaatgagatactgagcattgct
ggtggatatgtcgaagtgattcagcaatttggacaaattattgcaaccctcgattgtgtt
ttcgccttagctacagcagccgtgtcagcacccattccttatgtgcgacctaagctttta
cccaaaggctctggtgtgatgaagttgaagggaattcgacatccttgtttagaacttcag
gacgagatctcttacattccaaatgattgtaccttaaaccaaagtggtggactctttcac
ataatcactgggccaaacatgggtggtaaaagcacgttcctcagatcggttggagcagcc
gcactgatggctcagattgggtcctttgtggcttgtgacgaagcagagatttctattttg
gacagtatactggcaagagttggtgctggtgattgtcagttgaagggagtttcaacgttt
atggcagagatgttagaaacggcaaccatcctacggtctgctactaaagattccctgatc
atcattgatgagttagggcgaggaacgtcaacctatgatggctttggtttagcttgggca
atatcggaatacatagctaaagaaataggggccttttgtctatttgccactcattttcat
gaactcaccagtttagcagatgaagttgatactgtgaagaattttcatgttacagcatct
acatcgcatggcgcccttactttactctatcaggttcggccaggaccctgcgatcgcagc
tttggtatacacgtagccaagctagccaacttccctgatagtgtgattgagtatgcaaaa
agaaaagcaggtgaactagaagatgaattctgcggtgacgatgacgatgaatcagaagaa
gctgtgaaaagacgaaaggtggagaaacgcgagggggaaaaattgattgaaaccttcctt
tcaaaagcctcagcccttcacaatgaaggggttgatgacgaaaagttacagcaggaaatc
agcaagttgaggcaagaggtgctttctacgaataacgcctacatatctcacttactgtct
cgtgagacctga
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