KEGG   Macrobrachium rosenbergii (giant freshwater prawn): 136840266
Entry
136840266         CDS       T10429                                 
Symbol
spel1
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
mrj  Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mrj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    136840266 (spel1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mrj03400]
    136840266 (spel1)
DNA repair and recombination proteins [BR:mrj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     136840266 (spel1)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I AAA_27
Other DBs
NCBI-GeneID: 136840266
NCBI-ProteinID: XP_066963014
LinkDB
Position
1:38962745..38980554
AA seq 923 aa
MASLQPKEFAIGLANRILLFLRNFQKSNTTVRIFDRGDYYTVHGPDAVLAAKELFHTNSV
IKLLGAGEKKVESVILSRLNFESFVRDLLLVKHYRIEVYKQKSGKNDWEAEYKASPGNLS
QFEEILFGGSSELNVTTGVMAVKLANESGQRIVGVGYVDTAGRAMTVSEFTDNEAFSNLE
ALIVQLGPKECLIAQGDLGPDGVKLKQVLSRSNMLVTERKKSEFSVKDADQDLNRLLRRN
DTGSVATRPEFDRVVALAALTVVIKYLELLNDEXNFQCLTLSQYDLSQYVRIDSAAVRAL
HVEPVGETLEVSGGASKTHTILGLLDKCRTPLGHRLLAQWLRQPLIDINKIEERQDLVEA
LVSSVDLRHSLGEEHLRSIPDLHRLARKLTRKAATLQDCYRFYVCVQRLPSMCEAIAKYE
GPHVTALAAVFITPLQELISDLSKYQEMIETTVDMEQAKLGEYVIKPDFDEKLAELCGKM
DELEADIQSQFRKAASDLGLEAGKSIKLESNAQLGYFFRVTLKEEKVLRNNRSYRMIDTN
KAGVRFRNSAMQDLNDQYTSCREEYGCQQKSVVNEILSIAGGYVEVIQQFGQIIATLDCV
FALATAAVSAPIPYVRPKLLPKGSGVMKLKGIRHPCLELQDEISYIPNDCTLNQSGGLFH
IITGPNMGGKSTFLRSVGAAALMAQIGSFVACDEAEISILDSILARVGAGDCQLKGVSTF
MAEMLETATILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIAKEIGAFCLFATHFH
ELTSLADEVDTVKNFHVTASTSHGALTLLYQVRPGPCDRSFGIHVAKLANFPDSVIEYAK
RKAGELEDEFCGDDDDESEEAVKRRKVEKREGEKLIETFLSKASALHNEGVDDEKLQQEI
SKLRQEVLSTNNAYISHLLSRET
NT seq 2772 nt   +upstreamnt  +downstreamnt
atggcgagtttgcagccgaaggagttcgctatagggctggcgaacaggattctcctattt
ttgcgtaatttccaaaaatcaaataccacagtgagaatatttgatcgcggggattactac
acagtacatgggcctgatgctgttttagctgccaaagaactgttccacaccaattctgtt
atcaaacttttgggagcaggggaaaagaaggttgagtctgtcatcctgagtcgattgaat
tttgagtcctttgttcgcgatctgctccttgttaaacactaccgaattgaggtctacaag
caaaagtctggcaagaatgattgggaggctgaatacaaggcctcacctggcaatttatcc
cagtttgaagaaatcttgtttgggggaagcagtgagctaaatgttactacaggtgtcatg
gctgtgaaattggcaaatgaaagtgggcagaggattgtgggagtcggttatgtggacaca
gcaggaagggccatgactgtctcagaattcactgacaatgaagctttcagcaatttagag
gctctgattgttcagctgggacccaaagaatgcttaattgcacagggcgatttgggccca
gatggagtgaagctgaaacaggtactttcaagaagcaatatgctcgtcactgagagaaaa
aagagtgaattttcagtgaaagacgcggaccaagacctgaatcgtctcttgcggagaaat
gacactggctctgttgcaacaagaccagaatttgatcgtgttgttgctcttgcagcctta
actgtagtaatcaaatacctggagcttcttaacgatgaatagaactttcagtgtttgaca
ctctcccaatacgacttgagtcagtatgtgagaatagatagcgctgcagtcagagcactt
cacgttgagccagtgggagaaacactcgaagtttctggtggggcttctaaaacacatacc
attcttggccttttggacaaatgtcgaactccattgggtcatcgtcttcttgctcagtgg
cttcggcagcccctcattgacattaacaaaatagaggagcgccaggacctagttgaagct
ctggtatcgtcagttgacttacgtcacagcctgggagaagaacaccttagaagcattcct
gatcttcatagattggcacgaaaattgactcgcaaggcagcgacactgcaggattgctat
aggttttatgtttgtgttcaacgtttgcctagcatgtgtgaagccattgcaaaatatgaa
ggtccccatgtgacggctttagcagcagtgtttataacccctcttcaggaactaatatct
gaccttagtaagtaccaagagatgattgaaaccaccgttgatatggagcaagccaaattg
ggagaatatgttatcaagccagattttgatgaaaaacttgctgagctctgtgggaagatg
gatgaattggaagctgatattcagagtcagtttagaaaggctgctagtgacttgggcctg
gaagcaggaaagtccattaagctggagtcaaatgcacagcttggatatttcttcagagtt
actttaaaggaagaaaaagtcttgcgtaataataggagctatcgaatgatagatacaaac
aaagctggcgtgaggttcagaaacagcgccatgcaagatttgaatgaccagtacacctcg
tgtcgagaagagtatggatgtcaacagaaaagtgtggttaatgagatactgagcattgct
ggtggatatgtcgaagtgattcagcaatttggacaaattattgcaaccctcgattgtgtt
ttcgccttagctacagcagccgtgtcagcacccattccttatgtgcgacctaagctttta
cccaaaggctctggtgtgatgaagttgaagggaattcgacatccttgtttagaacttcag
gacgagatctcttacattccaaatgattgtaccttaaaccaaagtggtggactctttcac
ataatcactgggccaaacatgggtggtaaaagcacgttcctcagatcggttggagcagcc
gcactgatggctcagattgggtcctttgtggcttgtgacgaagcagagatttctattttg
gacagtatactggcaagagttggtgctggtgattgtcagttgaagggagtttcaacgttt
atggcagagatgttagaaacggcaaccatcctacggtctgctactaaagattccctgatc
atcattgatgagttagggcgaggaacgtcaacctatgatggctttggtttagcttgggca
atatcggaatacatagctaaagaaataggggccttttgtctatttgccactcattttcat
gaactcaccagtttagcagatgaagttgatactgtgaagaattttcatgttacagcatct
acatcgcatggcgcccttactttactctatcaggttcggccaggaccctgcgatcgcagc
tttggtatacacgtagccaagctagccaacttccctgatagtgtgattgagtatgcaaaa
agaaaagcaggtgaactagaagatgaattctgcggtgacgatgacgatgaatcagaagaa
gctgtgaaaagacgaaaggtggagaaacgcgagggggaaaaattgattgaaaccttcctt
tcaaaagcctcagcccttcacaatgaaggggttgatgacgaaaagttacagcaggaaatc
agcaagttgaggcaagaggtgctttctacgaataacgcctacatatctcacttactgtct
cgtgagacctga

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