Macrobrachium rosenbergii (giant freshwater prawn): 136840284
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Entry
136840284 CDS
T10429
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mrj03009
]
136840284
Ribosome biogenesis [BR:
mrj03009
]
Eukaryotic type
90S particles
Other 90S particles
136840284
Pre-60S particles
Other pre-60S particles
136840284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
TPR_TNPO3_IPO13_3rd
PBC
CLASP_N
Motif
Other DBs
NCBI-GeneID:
136840284
NCBI-ProteinID:
XP_066963061
LinkDB
All DBs
Position
7:complement(32680661..32867606)
Genome browser
AA seq
1335 aa
AA seq
DB search
MKLKRTHGKGRKWKKGQSCVSNPENSKHRELAKGRFFQKIEGESGLTKEALAAHNNALSS
VAKEMEDLSIDPDDLRSAGKSFNTFATTFTQCTIPAFERFFRNFNATSETHTRMLAIHAA
AQEYMTEANMPETSTSYFCSLMVSLEGLKESEDDVEAVLSLMARVIRRVHIEVLQSKFGD
FAKALDAIITQYQSSLKNALLTNAIGCMSVLLRAQDLEQWKISYTQNLLHKLVLFTMNEK
PKIRKSAQYNVAAILKGSTFIVKSEEKISHPGSLPVGEFCVSQLRAASEMGNTKTTLHIL
VFLRQVIMTFPKKTMKSACECVLSLMQLGSSLINISSMEAIYSLLVSEPPSTVFSADTNA
ALIAALTNRLDSKTVRGVSVIPGMNDSQLACAWITVLTVAHINLFKLDQDQGLKFMPSWF
RDLVPYWQSEHDEVQSKVSESFQAILEECIGNCSKEVIIANRDKMETIFQAVSSGLSYQY
QGSWDCVFNSLDSCFKVLGAHFPEMLKPCLRSLSELMDNPKVPHRRYLEQSIGSFVTSVG
PKAVMEVIPLQVTGNIAEDEKYLWILPILKRYIKNTQLAFFEDFFVHLAGKCFIIINSLK
EKGEGDSILAKTYHTVENQIWNLLPGFCDKATDVDEVLGNEKFARIICDHIRLRDDTRIT
MMTALRTLVNDNVENPGKLSFYAKNYLPALFNIYLTKPQSFKGKSSPNELSESIISNGHR
LAAYATIRTYLQIVPQPKYQEFLGMVMKKYNDETDEFKRQAFLDLARTFLPYIDSALVLR
LFSKVKPILDAKTDRHVQKAAYRLLEETLSIRNEACQSFVNENIDELSSLLLKSISAAAP
SSRAPRLRCVRQIVLQLDKNISEEKLNEFLQQVVGESVMCCGKSLSTSVRKAAFLLISEV
GGTIQKHTGCTGEETVRRCIKMLLAGLAGSPMLASNTILAITSLAYQYKDIVSSDMLDLL
MENMCTQLLCHSREVVGSSLSFIKSALVVFPIPVMTNYVDMVVKAMCGMVVDCQKKFRNK
TRDIFDRLMRKFGADRTMALVPSDDDILQKRLRNLRKSAARKKREREAKKDGDDSDDDFE
TKAHPTSLDEILAAIDSEPEDDDDEDNDSMLKRKGKKAKGKLTKKKEKGTWIKEDEDEIV
DLLDASAGKAMVSKRPILKASNTKRLENGKEDSGFKVDSKTGKLIITEENDTKESTSKMD
FMEDIDEYLGLKEGAQSGKIKNRKRTLSGGSEDEDIFTPPMKFSKDGPDQEKAKRKPVKK
HYDYGAEFRSKKAGGDMTKKDKLSPYAYVQFSKERLNKRKKAKFEGQFTSLVRGARKGVA
KGMKLKGKKKMSGRK
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaacgcactcatggtaaaggccgcaagtggaagaagggtcagagctgtgtc
tcaaatcctgaaaattcaaaacatcgtgaacttgcaaagggaagattttttcaaaagatt
gaaggagagagtggattgaccaaggaagcattggcagctcataataatgctctcagcagt
gttgcaaaagaaatggaggatctctccattgatccggatgacttgcgtagtgctggaaaa
agtttcaacacatttgctaccaccttcacacagtgtacaattcctgcctttgaaagattc
ttccgtaatttcaatgctacatctgaaactcatacaagaatgcttgctatccatgctgca
gcacaggaatatatgactgaagccaacatgccggaaacttctacgtcttatttttgtagt
ttgatggttagtttggaaggcctcaaggagagtgaagatgatgttgaagctgttttgtca
ttgatggctagagtaattcgacgtgttcacattgaagtcctccagtcaaagtttggtgat
tttgccaaagctctggatgcaataatcactcaatatcaaagttctttaaagaatgcattg
ctaacaaatgcaattggttgcatgtctgttctgttgcgagcacaagatctggaacagtgg
aagatttcatatacacaaaatttattgcataaattagtgttatttactatgaatgagaaa
cctaaaattcgaaagtctgctcagtacaacgttgcagccattctgaaaggttccacattt
atagtcaaaagtgaagagaagatttcccaccctggctctttgcctgttggcgagttctgt
gtttcacaattacgagcagccagtgaaatgggtaacactaaaacaacattacacatatta
gtattcttaagacaagttattatgaccttccctaagaaaactatgaagtctgcttgtgag
tgtgtgctgtccctgatgcaacttggaagttctctgattaacatttcttcaatggaagca
atttatagtcttttggtgtctgagccaccctccacagtcttttcagctgacacaaatgca
gctttaatagctgcacttacaaacagactggattcaaaaactgtgagaggagtgtcagtc
attccagggatgaatgattcccagcttgcctgtgcatggatcacagttctgacagttgca
cacatcaatcttttcaaactcgaccaagatcaaggattgaaatttatgccttcttggttc
agggacctagtgccatactggcagagtgagcatgatgaagttcagagcaaggtgtctgag
tcattccaagctattttagaagaatgtattggaaattgtagtaaagaggtcattatagct
aacagggataaaatggaaacaatcttccaggcagtgtcaagtggcttgtcatatcaatat
caaggatcatgggactgcgtatttaattctcttgatagttgcttcaaagtacttggggcc
cattttcctgaaatgctgaaaccctgccttagaagtctttctgaactaatggacaatcct
aaagttccacatagaaggtatttggaacaatccattggttcctttgtgacatctgtagga
ccaaaagctgtcatggaagtaattcctttgcaagtaacaggaaacattgcagaagacgag
aagtacttgtggattttgcccatattaaagcgttacatcaagaatactcagttggcattt
tttgaagacttctttgtgcatcttgctggtaaatgcttcataattattaattctctaaaa
gaaaagggtgaaggagattccatcttagctaaaacttaccatacagttgaaaatcagatc
tggaaccttcttcctggcttttgtgacaaagctactgatgttgatgaggtactgggaaat
gaaaagtttgctcgtattatctgcgaccacatcaggctacgtgacgacacaagaattact
atgatgacagccttacgaacattggtaaatgataatgtggaaaacccaggaaaattgtca
ttctatgcaaagaactacttacctgccttgttcaatatttaccttactaagccccagagc
ttcaaaggtaaatcgagccccaatgagttgagtgaatccatcataagtaatggtcatagg
cttgctgcttatgcaaccattagaacttaccttcagattgtcccccaaccaaaatatcaa
gaatttttaggaatggtcatgaagaaatataatgatgaaaccgatgagttcaaaagacaa
gcctttttggacttggcaagaactttcctcccatatatagattctgcattagtattacgc
ttgttcagtaaagtaaaaccaattttggatgccaaaactgatcgacatgtacaaaaagct
gcttatagattgttggaggaaacactgagtataagaaatgaggcatgccaatcctttgtt
aatgaaaacattgatgaattgtcatctttacttttaaagtctatatcagctgctgctccc
agctcccgtgctcctcgcttaagatgtgtcaggcaaattgtgcttcagctggataagaat
attagtgaagaaaaattaaatgagtttttacagcaagtggttggagaaagtgttatgtgt
tgtggtaaaagcttgtctacgtctgtacgaaaggctgcctttttgctgatatcagaagtt
ggtggaactattcaaaaacatactgggtgtactggagaagaaacagttaggaggtgcata
aagatgcttttggcagggttggcagggtcaccgatgcttgcttcaaatacaatcttagcc
attacatctctcgcatatcaatataaagatattgtatcttcagatatgttggatctcctt
atggagaacatgtgcacacagcttctttgtcattcacgagaagtggttggatctagtctt
tcgttcatcaaatctgccctcgttgttttccctataccagttatgacaaattatgttgac
atggttgtgaaagccatgtgtggtatggttgttgattgtcaaaagaaattcagaaataaa
accagagacatctttgaccggctgatgcggaaatttggagctgatagaaccatggcgtta
gtcccatccgatgatgacattcttcaaaaaagacttcgcaacttacgcaaatcagcagcg
cggaaaaagagagaaagggaagccaagaaggatggtgatgatagtgatgatgactttgaa
actaaagcacatccaaccagcctggatgaaatcttggctgcaatagatagtgaacctgaa
gatgatgacgatgaggataatgacagtatgcttaagaggaaagggaaaaaggctaaaggg
aaactgacaaagaagaaagaaaaaggcacctggattaaagaagatgaggatgaaattgtg
gaccttctggatgcatcagctggtaaagcaatggtttcaaagcgaccgatcctcaaagca
tcaaacactaagaggcttgaaaatggcaaggaagactcaggcttcaaagttgactcaaaa
actggtaaactcatcattacagaagaaaatgatacaaaggaaagtacttcaaaaatggac
tttatggaagatattgatgaatatcttggcttaaaagaaggtgctcagtcagggaagatc
aagaacaggaaaagaaccctgagtggtggatcagaagatgaggacattttcacgcctcca
atgaagtttagtaaagatggtcctgatcaagaaaaagccaagaggaaacctgtcaaaaaa
cactatgattatggagcagaatttagatctaagaaggctggtggggacatgacaaaaaag
gataagttatctccatatgcatatgttcagttctccaaagagcggctaaataaaaggaaa
aaggccaaatttgaagggcagttcactagtctcgtgaggggtgctagaaaaggtgtagcc
aagggtatgaagctaaaaggaaagaagaaaatgtctggaagaaagtga
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