Macrobrachium rosenbergii (giant freshwater prawn): 136840328
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Entry
136840328 CDS
T10429
Symbol
Vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
136840328 (Vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mrj04131
]
136840328 (Vps8)
Membrane trafficking [BR:
mrj04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
136840328 (Vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
TPR_Vps41
Clathrin
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
WD40_2
Beta-prop_HPS5
ANAPC4_WD40
Aminotran_1_2
Beta-prop_EML_2
zf-RING_2
Beta-prop_IFT80_2nd
zf-RING_5
WDR55
Beta-prop_WDR3_1st
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
136840328
NCBI-ProteinID:
XP_066963121
LinkDB
All DBs
Position
7:complement(39830144..39870098)
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AA seq
1406 aa
AA seq
DB search
MANEGEGQLSNDNVIKNECDLVEQLDLQLEELDDEEFQLPPVDELPTLESILNENDPGSI
SDEDTTAPQPSQLKASFSQDGGDTLSLHSRGSSDSKSRNSSDKHSSGSRTRREPQSKTHG
SILRHVILKGVAAQLVSAYDRVGAGLPTTMAVGNVICIGTSHGLILVFEPTQALKYCLGS
TQLGEQYGSVSALALNNDCTRLLAGFAKGQICLFDLTSSKLLQTISDAHTPFTAVLHLKW
TDYPGMAVISDSGGSVFELSIKRTMGLNSNESRCIFSGSRGEVCTVEPLLMSQFRANPGT
ETIILAMATISKVIVVSLRPQLKVLFSYPLKASASTLPLLAWQFVVIQMPDGVRVVDPVL
AFGREKSVYFYQLTHGSQEELRFLPLQKMVLTYIVQAMAWLNSRTLAVMDTREQLHIVDV
KSQEELEMVDLAHLGLVYASPHFKAIATGSNVSKAMALAGERACYHSMVSFGSQVLLLGT
KSFQVVTVRSWIDRLDHLVRSGHMREALQLALDIYQDKAQAVVGLKQKKEKRQQLVQEKI
CELLNQYLDHGIENLPDRSNLVSITQYYSLMVPLCVKVAVGSNLTDMLFGRIWDTFSEDA
ISKGIFLEALEPYILSDQLADISPVISQCLLSHQETSGRLEAAEACIVHLEVTSLDLHQA
LKLCWTHGLYDAIFYIYTRGIKDFITPLEELSTVLCNAMDSGVALSDNLVKLGNKILVYI
SCCLAGRAYPRGDIEEPILQQVKHETFKCLTSLHTKNSKPNEECYPFLRTLLRFDTREFL
NVLSLAFEEAEFTSELGMIQRQRVVDILLQVMVEGQGFGPAQLGSLFTFIARQMSRQQGA
IAINRQLFDQVLSHLTAPDASSHHEERETALLELLQEGGLVHYDRDHLLDKAWKAEFYRV
CEYVYEVQGKHEKIIECYIYDKMRKHQVFTYIRSVLTSPQFTDLHAQKIQQQFLNHIKCL
LDIDSSRVASLILTMPQLTPFLDDVMTKLRGDNKYMYSALHALFTYRATHASPGGRGVDS
NENILTSELQEEYIDLMCEVNPTQVYTYLKGAEGYRLEETLEICRRHNQPESTAYLLEKA
GDIKGAFEILLSILKSRVEDFLAAVEKDSSGSSSTVPLGHVQAQVVKLVRVCQLGSSQLE
EANRRELWFPLLDVLLSTQPKIAHHQTLAHEMRGMVGHVVNSMMTHIALPAILERVMHDP
GYCGGNFAQIKHLLKGMVERYVYEETLYSGVVNMIAEDQLRYLTIKHSQAASPLVIYSTT
CAICHSVYHPASKAVAHFCGHSYHAQCGGEGSSCVLCTGSSQDGQTEEEQAAETSGTQQV
GLDDTQLEGIRRVNSISSGGSRLQFLEELSAPKGVGRSGSESIGASIKSFGQGPSGSTSN
SQDIWCSQDFALKLAPPTITFEGFEE
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgaaggggagggtcaactgtcaaatgacaatgtaattaagaatgaatgcgac
ctcgtcgaacaactagatcttcagctcgaagagcttgatgacgaagaattccagttgcct
ccagttgatgaactgccaacattagagagcatcctgaacgaaaatgatccgggatctata
tccgacgaagacaccactgccccgcaaccttcacagctgaaggcatcgttctcacaggat
gggggagatacgctttctctccactcccgtggaagttccgattccaaaagccgtaactcg
tcggacaagcacagttcgggcagcagaaccagaagggaaccccagagcaaaacccacggg
tccatcttacgtcacgtgatactgaagggggttgcagctcagctggtgtcagcctatgat
cgcgttggtgctggattgccaaccacaatggcagttggtaatgtgatttgtataggaact
agccatggtctgatcctagtctttgagccaacgcaagctctcaagtattgcttagggtct
acgcagctcggtgaacagtatgggtccgtgtccgcactggctctcaataatgactgcact
cggcttttagctggatttgccaaaggtcagatatgtttgtttgacctgacttccagtaaa
cttctgcagaccatctccgatgcacacactccatttacagcagttctgcatttgaagtgg
acagattatccaggtatggctgtgatcagtgacagtgggggatcagtctttgagctctca
atcaagaggacgatgggtctgaattcgaatgagagccgatgcatattcagcggaagccgt
ggggaagtctgcaccgtggaacccttgctgatgtcccagtttcgtgccaatccgggcacc
gaaactattattcttgcgatggcaactatttccaaggttattgtcgtttcgctacggcca
cagttgaaggtattgttttcgtacccgctgaaggcctctgcttcgacgttacccctgctc
gcttggcagtttgtcgtcattcagatgccagacggagtgagggtggttgatccagtatta
gcctttggcagagagaaaagtgtctacttctatcaacttactcatggcagtcaggaggag
ctacggtttctgcctcttcagaagatggtgcttacgtacatagtccaggcaatggcgtgg
cttaactccaggacactggctgtgatggacacgcgggagcagctgcacatagtcgacgtg
aagtctcaagaggagttggaaatggtcgaccttgcgcatctgggcttggtttacgcttct
ccgcactttaaagccatagctacggggagcaatgttagtaaggcgatggccctcgctggc
gaaagggcttgttatcattccatggtgagctttggatcacaggttcttcttcttggtaca
aagtcatttcaggttgttactgtacggtcgtggatcgaccgtttggaccatctcgtacga
agtgggcacatgagagaggcactacagttggccttggatatatatcaagataaagcacaa
gcggttgttggactgaaacaaaagaaggaaaaacggcagcagttagtacaagaaaagatc
tgtgagttgctcaaccagtacctcgatcatggcatagagaatctccccgacagaagcaac
ctagtgtcaattactcagtattactctctgatggtcccactgtgcgtcaaagttgctgtt
ggatcgaacctcactgacatgctatttggccgcatctgggatacattctcagaagatgcc
atctccaaaggtatttttctagaggcgttggaaccctacatcctgagtgatcagctggca
gacatatctccagtgatttcacagtgtctgttgtcacaccaagagactagtgggaggcta
gaggcagctgaagcatgcatagttcacttggaagtaacttctcttgatctgcaccaggcg
ttgaagctgtgctggactcatgggttgtacgacgccatcttctacatctacactcggggc
ataaaggacttcataactcccctagaagaactcagtactgtgttgtgtaatgccatggac
agcggagttgctctgagtgacaatctcgttaagttaggaaataagattctagtgtacatt
tcttgttgtttggctggacgagcctacccgcggggtgatatcgaggagccaattttgcag
caagttaagcacgaaactttcaagtgtttgacttcgttgcacacgaaaaattctaagcct
aacgaagagtgttacccatttttaaggacgttactacggttcgatactagagaatttttg
aatgtgctttcgctagctttcgaagaagcagagttcacgtctgagctggggatgatacag
aggcagcgtgttgtggacattttgttgcaggtcatggtggaaggacaaggttttggtcca
gctcaattggggtccctcttcaccttcatagcacgccagatgtcccgacaacaaggagcc
attgctattaacagacagctctttgaccaggtgctatcccatctcacagccccggatgct
tccagtcatcacgaggaaagagaaacagctctgttagaactgcttcaggaaggaggcctt
gttcattatgatagagaccatcttctcgacaaggcttggaaagctgaattttaccgtgtg
tgtgaatatgtatatgaggtccagggaaaacacgagaaaatcattgaatgctacatctat
gacaagatgaggaagcaccaggtcttcacatacattcggtctgttctgacctcaccgcag
ttcacagacttgcatgcccagaagattcagcaacagtttctcaaccatatcaagtgtctt
ctcgatatcgacagcagcagggtagccagccttatcttaaccatgcctcagttaacgccc
tttctcgatgatgtgatgaccaagcttcgaggggacaacaagtacatgtatagtgctctt
catgctttattcacttacagggcaactcatgcatccccaggtgggagaggagtggattcc
aatgaaaatatattgacctcggagctgcaagaagaatatattgatctcatgtgtgaagtt
aatcccacccaagtgtatacgtatctcaaaggtgctgagggctaccgattagaggagact
ctggagatatgcagacgtcataaccagccggaatccactgcctaccttttggagaaagct
ggagacataaagggagcctttgaaatcctgttatctattttaaaatctagggttgaagat
ttcttagctgctgttgagaaagattcttcaggatcaagttcaactgtgccgcttggccat
gttcaagcacaggttgtgaagttagttcgtgtctgtcagcttgggtcgagtcaactggag
gaagcaaatcgtcgtgagttgtggtttccgcttcttgacgttttgttgtccacacagccg
aaaatagcacaccatcagaccctagcccatgaaatgcgagggatggtggggcatgtcgtg
aacagcatgatgactcacattgcgctgccagcaattctggaacgtgtgatgcatgaccca
gggtactgcggtggaaactttgctcagattaagcacttgctcaaaggtatggtggagagg
tatgtttacgaagaaacactttactcaggggttgtgaatatgattgcggaggaccagctg
agatatctgacaataaaacacagtcaggctgcttctcccctcgtcatatacagtacaact
tgtgccatatgccatagcgtgtatcaccctgcaagcaaagcagttgcccacttctgtggt
catagctatcacgcacagtgcggaggtgaaggttcgtcttgcgtgttgtgcactgggagc
agtcaagacgggcagacagaagaggagcaagcagccgagacctctggcactcaacaggtt
ggtttagatgatactcagctggaaggtattcgtcgcgtaaactccattagttctggaggc
tcacgactccagtttttagaagaattatctgctcccaaaggagtagggagatcgggtagt
gaatcgataggtgctagcatcaaatcctttgggcaagggccttcaggatctacttccaac
agccaagatatttggtgctctcaagattttgcgctgaagcttgcgccaccgacaattact
tttgaaggttttgaagagtga
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