Macrobrachium rosenbergii (giant freshwater prawn): 136840756
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Entry
136840756 CDS
T10429
Symbol
mib1
Name
(RefSeq) E3 ubiquitin-protein ligase MIB1 isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mrj04121
]
136840756 (mib1)
Enzymes [BR:
mrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136840756 (mib1)
Ubiquitin system [BR:
mrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136840756 (mib1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SH3_15
Ank
MIB_HERC2
Ank_5
Ank_4
zf-C3HC4_3
Ank_3
ZZ
Ank_KRIT1
zf-C3HC4_2
Sina_RING
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
136840756
NCBI-ProteinID:
XP_066963708
LinkDB
All DBs
Position
8:42669554..43584816
Genome browser
AA seq
1037 aa
AA seq
DB search
MEAAGATTGRNTRYMMEGVGARVIRGPDWKWGKQDGGEGHVGTVRNFESPEEVVVVWDNG
TAANYRCAGAYDLRVLDSAPTGVKHEGTMCDTCRQQPIFGIRWKCAECSNYDLCSVCYHS
DKHNPRHRFYRITTIGCERVLLEPRRKSKKIGIRGIFPGARVVRGVDWQWEDQDGGNGRR
GKVSEIQDWSAASPRSAAYVIWDNGAKNLYRVGFEGMADLKVVNDAKGGTVYRDHLPLLG
EQNPGRSGPHGLAIGDQVSVNVDLELEIVQSLQHGHGGWTDGMFECLGTTGTVVGIDEDH
DIVVAYPSGNRWTFNPAVLTKVGGGVVMSNESSTSQQFSVGDLVQICADLERIKILQRGH
GEWAEAMVPTLGKIGRVQQIYHDNDLKVEVCGTSWTYNPAAVTKVASDGAVPGAASGERL
SALLKKIFEAHVSGDLNEELVKAAATGDAQKVDEILKKGDVDVNGVFAGHTALQAASQNG
HLEVIHILLRYSAQVEKEDKDGDRAIHHAAYGDEPGVVQILASAGADLNARSKRRQTPLH
VAVNKGHVGVVKILLELGGHPSLQDHEGDTPLHDAISKKRDDILTLLLDHAADITLTNNN
GFNSLHHAALRGNPSAMRILLSKVPRSWMVDEKKDDGYTALHLAALNNHVEYVLQVAELL
VHQGRANMDLQNVNLQTPLHLAVERHHTQIVRLLVREGANLNLADKDGDTPLHEALRHHT
LSQLRQLQDMQDVGKSPQLLMGLGTQGVDKKSPASIACLLAAHGADLNIKNKKGQTPLDL
CPDPNLCKALTKCYKDKSCSGEMGALEVCAEESLEECMVCSDTKRDTLFGPCGHIATCSI
CSPRVKKCLMCKEPVQSRTKIEECVVCSDKQASVLFQPCGHMCACDNCASLMKKCVQCRG
VIEKHIPFIVCCGGQAPPSILPSGANNNSASSSGGGSSSGSNNAATAAAATVAPGVVVPG
PTGPLMNNGSRDMSSADLQKLQQQLHDIKEQTMCPVCLDRLKNMIFLCGHGTCQMCGDRM
HECPICRKPVEKRILVF
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagcaggagcaacgactggcagaaatacgagatatatgatggaaggagttggt
gcgagggtgattcggggcccggattggaagtggggcaagcaggatggcggcgagggtcat
gttggtacagttcgaaattttgaatctcccgaagaagtagtagtagtctgggacaatgga
accgctgcaaattatcgttgcgctggtgcatatgatctacgcgtcttagattcggcacca
actggtgttaaacatgaaggtactatgtgtgacacttgtagacagcagcccatatttgga
attagatggaagtgtgcagagtgtagcaactatgatttgtgttcggtttgttaccacagt
gacaagcacaatccccgtcatcgtttttatcgaatcactacaataggctgtgaaagagtg
ttgctggaacctcgccgtaaaagtaaaaagatagggatccgaggaatttttcctggggca
agagtcgtaagaggagtggactggcaatgggaagaccaagacggaggaaacggaagacgt
ggtaaagtatctgaaatccaggattggtctgcagcctcaccaagatctgctgcttatgtc
atttgggataatggtgctaaaaatctctacagagtgggatttgaaggcatggctgaccta
aaggtggtgaatgatgcaaagggtggcacagtgtacagagatcatcttcctcttctcggt
gagcaaaatcccggccgctcgggaccccacgggttggccattggagaccaagtaagtgtg
aatgtggacttggagctggaaattgttcagtcattgcagcacggccatgggggctggact
gacggcatgtttgaatgcctgggcacaactggaactgttgttgggattgacgaagaccat
gacatcgttgtggcttatccatccggtaacagatggacttttaacccagctgttcttaca
aaggttggtggaggtgttgtgatgagcaacgaaagtagtaccagccaacaattcagtgtt
ggtgaccttgtgcaaatttgtgcagacttagaacgtattaaaattcttcagagaggacat
ggtgaatgggcagaggctatggtcccgaccttaggtaaaattggacgtgtgcagcaaata
tatcatgacaacgaccttaaggtggaagtttgtggcacctcttggacttacaatccagca
gcagttaccaaagttgcctcagatggagctgtgccgggggctgctagtggagagagattg
agtgctctgctgaagaagatatttgaagctcacgtctcgggtgatttaaacgaagaatta
gtgaaggctgcagctaccggtgatgcacaaaaggtggatgaaattctgaaaaaaggagac
gtggatgtcaatggagtatttgctggtcatacagccttgcaagctgccagtcagaatgga
catttggaagttattcacatcttgcttcgatacagtgctcaagtagaaaaagaggataaa
gatggagaccgagccatccaccatgccgcttatggtgatgagccaggtgtagttcaaata
ttagcaagtgctggagcagatctgaatgcccgtagcaaacgaaggcaaactccactccat
gttgcagttaataaagggcatgtgggagttgtcaaaattctgcttgaacttggaggtcac
ccaagtctccaggaccatgaaggtgacactccacttcatgatgcaatttcaaagaaacgc
gacgacatcttaacactgcttctggaccatgctgctgatatcaccttgacgaacaacaac
ggcttcaactcccttcaccatgcagctcttcgcggcaatccaagtgccatgaggatcctg
ctgagcaaagtgccaaggtcgtggatggtggatgaaaagaaggatgacggttacacggcc
ctccacctggctgctctcaacaatcacgtcgagtatgttttgcaggttgctgagttgcta
gtgcaccaaggacgggccaatatggacttgcaaaatgtgaatttgcaaacgccactgcat
ctggctgtggagagacaccatactcagatcgtcaggctcctggttcgagagggtgcaaac
ctcaacctagcagacaaagatggcgacactccactgcacgaagcactgagacaccatacc
ctgtctcagttgaggcagctgcaggacatgcaagatgtcggaaagtccccgcaactgctg
atgggtctgggaactcaaggagtcgacaaaaagagcccagcttccatagcgtgccttttg
gcagcccacggagccgacctcaatattaagaacaaaaaaggccaaactccgctcgacctc
tgccctgatccgaacttgtgcaaagcccttacgaagtgctacaaagataagtcgtgctca
ggagaaatgggtgctctagaggtttgtgccgaagaaagcctcgaggagtgcatggtgtgc
tcagatacaaaacgtgatacgcttttcggtccgtgtggccacatagccacctgttctata
tgctcgcctagagtcaagaagtgtcttatgtgtaaagagcctgtgcagtctagaacaaag
attgaagaatgcgttgtttgttcagacaagcaagcatctgtactcttccagccttgtggc
catatgtgtgcatgtgacaattgtgcctcgctcatgaagaagtgtgtccagtgtagagga
gtcatcgaaaagcatatcccatttattgtttgttgtggtgggcaggctccaccatcaatt
cttccaagcggtgccaacaataacagcgcaagcagcagtggtggaggcagcagtagtggc
agcaataatgctgcgacagccgctgccgcaacagtagcgcctggagtggtcgtccctggc
cctacgggaccccttatgaacaatggctcacgtgacatgtcatcagctgatctccagaaa
cttcagcaacagctccacgatatcaaagaacagaccatgtgtccagtttgcctcgaccgt
ctgaagaacatgatcttcctctgtggccacggaacctgccagatgtgcggagaccgaatg
cacgagtgtccaatctgccgaaaacccgtcgaaaagcgtatcttggttttttga
DBGET
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