Macrobrachium rosenbergii (giant freshwater prawn): 136840760
Help
Entry
136840760 CDS
T10429
Name
(RefSeq) DNA polymerase lambda-like isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03410
Base excision repair
mrj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
136840760
03450 Non-homologous end-joining
136840760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrj03400
]
136840760
Enzymes [BR:
mrj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
136840760
DNA repair and recombination proteins [BR:
mrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
136840760
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
136840760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
DNA_pol_B_thumb
NTP_transf_2
BRCT_2
Tox-HDC
HHH_5
Motif
Other DBs
NCBI-GeneID:
136840760
NCBI-ProteinID:
XP_066963727
LinkDB
All DBs
Position
8:complement(43890949..43908912)
Genome browser
AA seq
592 aa
AA seq
DB search
MKRKISQPRTSQKKIKNEESDQNCQDPVIATIFQGLVFHIHPASFGTGRLQIFEKQVKKY
GGQLIQPLAKFSETVTHIIFEESIDSEKAQKLVDPVSFPRAVFAKCSWLSLCIKTKSRVS
TRDFEINVRSDKVRKGQYKSETDSLCEPSTNVETVAHIEKASVQPNGSLDVISIHNEGDT
SEATVPTASRTHEVNDEEKQRKDKLSSSENQESSVHSNKNLKNDNKLKPPEDVLKNGENY
PLIKPFPKNLQQKFACSQPSSSQTKGFNSHITAELEKLAAAYKSKNDTWRAVGYQKAISA
IRNYPHEITSREEALKIRGVGARLADKVAEIIESGRLRKVAEVCEGEETQTLQLFMGVWG
AGPTTAQSWYIQGFRTLDDLLSKATLTRHQQIGLKYYDDINSRIPRDEVVEIENYVREAA
LSIKNGLIVTVCGSYRRGKPTCGDVDVLITHPDGHSHSMIFKPILQKLRDTGFLTDDLVI
QEDNGDQKKYLGVCLLPGENRKHRRLDVIVVPYSEHAPALMYFTGSAHFNRSMRLLAVKM
GMSLSEHGLRAGIVRQTHISPHPFVFIWSLTLKTPLQRIEDHYQLYSVFFHR
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggaagattagccagccccgcacctctcaaaagaaaattaaaaacgaggaaagt
gatcagaattgccaagatcctgtcatagcaactattttccaaggattagtattccatatt
caccctgccagttttggtactggccgactgcagatatttgaaaagcaagtgaagaaatat
ggcggacagttaatccagcctctcgcaaaattttcagaaactgtaactcatataatattc
gaagaatccattgactcggaaaaggctcagaaacttgtagatccagtcagtttccctaga
gctgtctttgccaagtgctcctggttaagtctttgtataaaaacaaagtcaagagtatca
acaagagattttgaaattaatgtgagatcagacaaagtaagaaaaggtcagtataagagt
gaaacagattctttgtgtgaaccaagtactaatgtggaaactgtggcacatatagaaaag
gcaagtgttcagcctaatggaagtcttgatgtaatttctatacataatgagggtgataca
tcagaggccacagttccaacggcgtctagaactcatgaagtgaatgatgaagagaagcaa
aggaaggataaattgtcaagttcagagaaccaagaaagctcagttcacagcaataaaaat
ttgaaaaatgataacaagcttaaaccaccagaggacgttttaaaaaatggagaaaattat
cctttgatcaagccttttcccaagaacttacagcaaaaatttgcatgttcacaaccatca
agcagccagaccaaaggttttaatagccacatcacagcagaattagaaaaacttgctgca
gcatacaagagtaagaatgatacttggcgagccgtaggataccagaaggcaatatcagca
atccgaaactacccacatgaaataacatctagagaggaagctcttaaaattcgaggtgtg
ggcgctcgactggcggacaaagttgcagaaattatcgaaagtgggaggttacgaaaggtg
gctgaggtatgtgaaggagaagaaactcagacattacagcttttcatgggtgtatggggt
gccggcccaactacagcccagagttggtatattcagggattcagaactctagatgacctc
ctctcaaaagctactttaactcgccaccagcagataggcctgaagtactatgatgatatc
aacagtcgaatacctagggatgaagtggtagaaatagaaaattatgtgagagaagcagct
ttaagcatcaagaatggcctcattgttacggtttgtggatcatatcgaagagggaagcca
acttgtggtgatgtagacgtactcatcacccaccctgatggtcattcacacagtatgatc
ttcaagccaattctccagaaactgagggacacaggatttttgactgatgacctggtaatt
caggaagataatggagatcagaaaaaataccttggtgtttgtttactccctggtgaaaac
agaaagcatagacgacttgatgtcatcgtggtaccatactcagaacatgctccagctctc
atgtatttcacaggatcagcacatttcaacagatctatgagacttctagctgtcaaaatg
ggtatgagtctgtctgagcatggtcttcgagcaggaattgttagacagacccatatcagc
ccacatccttttgtcttcatatggtccctgacactgaaaactccacttcaaaggatagag
gaccattatcaactatactcggtttttttccaccgttaa
DBGET
integrated database retrieval system
