Macrobrachium rosenbergii (giant freshwater prawn): 136840899
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Entry
136840899 CDS
T10429
Symbol
Gnf1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03030
DNA replication
mrj03410
Base excision repair
mrj03420
Nucleotide excision repair
mrj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
136840899 (Gnf1)
03410 Base excision repair
136840899 (Gnf1)
03420 Nucleotide excision repair
136840899 (Gnf1)
03430 Mismatch repair
136840899 (Gnf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrj03032
]
136840899 (Gnf1)
03400 DNA repair and recombination proteins [BR:
mrj03400
]
136840899 (Gnf1)
DNA replication proteins [BR:
mrj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
136840899 (Gnf1)
DNA repair and recombination proteins [BR:
mrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
136840899 (Gnf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
BRCT_2
RuvB_N
nSTAND3
AAA_18
AAA_14
AAA_16
AAA_33
AAA_30
AAA_assoc_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
136840899
NCBI-ProteinID:
XP_066963961
LinkDB
All DBs
Position
8:56993501..57048057
Genome browser
AA seq
1151 aa
AA seq
DB search
MDIRKYFFPVGGSKPSTTASSKESKKKNRIIDSDDEEPLPSSSKKQKILASDSDDEIFSY
SKTKKNKGEKPKKKSLPKPEPPKLKPAAVSEFFGSNPVVRKEAPVVAAKKKEVEVVDVHS
DEDFEKTLQELDEKSNKEKYSSQHEQKEKSKDITPKKTVQESKSVSHNEEKPKPNENSPP
SENAKKSSLSSKLSAKVNSFEKKDKLEGEKRERTQEVTPHKEKKHDHGKERSSSHKKKRK
HSEDDRNNRRDRTPDKNDNIHKKQKLSTQKDEGLVKQEEKGMPKRERYESGEKEKSDDQK
DVTPSKQKNENKEKSSSMKEKPKGLTPKKGEIASDIETTPQPDEKKKNARAAYFKFLQRS
GPSNPGSKLIPEGKPECLQGLVFVLTGVMESLDREEATELIKKYGGKVTSSLSRNTTYVI
VGNEAGESKLKKAEQLGTKQITEDDLLDLIRTRPGKGSNETPKGSEKKSTASKLKAFEKS
SKASISIKNSGPDEKASDLPPVNSSSSKSTSKSSPQKSLTLSQSSQNSQKIANSNSQSSS
TSSPKTQSISSQELKDRSGETLMWVDKYKPVNIKNIIGQQGDKSNVKKLLVWLQNWKKNQ
FGGKKLVRPSPWAKDDNGAFFKCALLSGPPGVGKTTTAHLVCKEAGFDFVELNASDARSK
RRLDEVVAELLSNKNLAGFAGGKEKGVTSENHALVMDEVDGMSGNEDRGGVQELITLIKK
SKVPIIAMCNDRNHPKIRSLANYCFDLRFNKPRIEQIRGPMMSVCFREGVKIKPDALDQI
IVGANQDVRQILHHLSVWSANQETLAADAMKVEAEKAKKDLKLGPWDVCKKVFTESDHKN
MSIYDKSDLFFHDYSIAPLFVQENYPKCVPHSAQSNRRKTLEQLSKTAACIADGDLCEKA
IRSRNAWSLLPVQAMYSSVLPGEYMSGHLSSQIEFPKWLGNNSRRNKFDRLMQELQMHMR
LRISGSKMDVNMDYCEPLKNAVTQPLVKEGVDGIHSAVDVMNTYNLLREDLDSMLELTLW
PGSKDPMSNVDSKVKAAFTRTYNKEGHMTPFAHVTVTKKKKGSTGGMGEEGMDGEEEEES
EEEEEDITKNAMIMVKKGGGKKGEASSSKGEGRGGGSNRGAGRGGSSNRGAGRGGSSNRG
AGRGGRGRGKK
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggatataagaaaatatttttttcccgttgggggaagtaaaccaagtacaactgcatct
tcaaaagaatcaaagaaaaagaatcgtattatagattcagatgatgaagaacctcttcct
tcatcaagcaaaaaacagaaaattttggcctcagactcggatgatgagattttcagttac
tcaaagaccaagaaaaataaaggagagaaaccaaagaaaaagtctcttcccaaaccagaa
ccccctaaactgaagccagcagctgtttcagaattttttggtagtaacccagttgtacga
aaagaagctcctgttgttgctgcaaagaagaaggaagtggaggtggttgatgttcatagt
gatgaggactttgagaagacccttcaagaattagatgaaaagagcaacaaagagaaatat
tcatctcaacatgaacaaaaggaaaaatccaaggacatcacaccaaagaaaacagtgcaa
gaatccaaatcagtttcacacaatgaggagaaacctaaaccaaatgaaaatagcccgcct
agtgaaaatgctaagaaaagtagtctttctagtaagctatctgcaaaggtaaacagcttt
gaaaagaaagacaagctggaaggagagaagagagagagaacccaagaagttactccccac
aaggaaaagaagcatgatcacggaaaagaaagaagcagcagtcacaaaaagaaaagaaaa
catagtgaagatgacaggaataatagaagggatagaacaccagataagaatgataatatt
cataagaaacaaaaattatcgactcaaaaagatgagggattagtgaaacaggaagagaaa
ggaatgccaaagagggaacgttatgaatctggtgagaaggaaaagagtgatgatcaaaag
gatgtcactccttcaaaacagaagaatgaaaataaagaaaaatcttcaagcatgaaggaa
aaacccaaaggtttgactcctaaaaagggagaaattgcttcagacattgaaactacgccc
cagccagatgagaagaagaaaaatgccagagcagcatatttcaaatttttgcagagatct
ggcccgagtaatccagggagcaagctgattccagagggaaaaccagagtgtttgcagggc
cttgttttcgtgttgacaggtgttatggaaagtttagatcgtgaggaagcaacagagctc
attaagaagtatgggggtaaagtcacctcatcattaagccgcaatacaacctatgtaatt
gtaggtaatgaagctggggaaagtaaattaaaaaaggcagaacagttgggcacaaaacag
ataactgaagatgatttgttagacctaatacgaacccgaccaggaaagggcagtaatgaa
actcctaaaggaagcgagaaaaaatcaaccgcaagcaaacttaaagcatttgaaaaaagt
agcaaagccagtatttctataaagaattcaggtcctgatgaaaaagctagtgatttacca
ccagtgaattcctccagttcaaagagtacttcaaaatctagtccccaaaaatctcttaca
ttgtctcagagtagtcaaaattcacaaaaaattgcaaatagtaacagccagtcgtcatca
acttcttcaccaaaaacacaatcaatttcatcccaagaactcaaagatcgttctggggaa
acactcatgtgggtagataagtacaagccagttaacattaagaatatcatcggccagcaa
ggagacaagtcaaatgttaaaaaactcttggtgtggttgcaaaactggaagaaaaaccaa
tttggtggcaaaaaactagtgagaccaagtccttgggccaaagatgataatggggccttc
tttaaatgtgctttgctgtcaggaccacctggtgttggtaaaaccacaacagctcatcta
gtctgtaaagaagctgggtttgactttgttgagctcaatgcttctgatgctcgatcaaaa
cggcgactagatgaggtggtagcagaactactttcaaacaaaaatctcgctggatttgct
ggaggtaaggagaaaggggttaccagtgaaaaccatgctctggttatggatgaagttgat
ggaatgtcgggtaatgaagatcgtggaggagttcaagagttaattacgttgattaaaaaa
tctaaagttcctattattgccatgtgtaatgacagaaatcatccaaagatcaggtctctt
gctaactactgttttgacctgagattcaataagccaagaatagaacaaattagaggtcca
atgatgtctgtgtgcttccgtgaaggtgtcaaaattaagcctgatgcccttgatcagatt
atagttggagcaaatcaagatgtacgtcagattcttcatcatttgtcagtgtggtcagca
aatcaggaaacattagctgcagatgccatgaaggtggaagcagaaaaggctaaaaaagac
cttaagttgggtccctgggatgtttgcaagaaagtcttcacagaaagtgaccataagaat
atgagcatatatgacaaatcagatttgttcttccatgactattccattgcacccctcttt
gtgcaagaaaattatcctaagtgtgttcctcatagtgcacagagcaatcgccgaaagacc
ttggagcagttgtcaaaaactgctgcttgtatagcagatggagatctatgtgaaaaggcc
atcagatccagaaatgcctggtcactccttcctgttcaggcaatgtatagcagtgttctt
ccgggagagtatatgtcagggcatttatcttcacaaattgagttccccaagtggcttggt
aataatagtcgtcgtaataaatttgatcgtcttatgcaagagttacaaatgcatatgaga
ctgagaatttcagggagtaaaatggatgttaacatggattactgtgagccgctaaaaaat
gctgttactcagcctttggtgaaggaaggagtggatggcattcacagtgcagtggatgtt
atgaatacttacaaccttttaagggaagatttggattccatgttagagttaacactgtgg
cctggctcaaaagatccaatgagtaatgttgatagtaaggtaaaagcagctttcacacga
acctataataaagaaggccatatgactccttttgctcatgttactgttacaaagaaaaag
aaaggtagtaccggtggtatgggtgaggaagggatggatggtgaagaggaggaagaaagt
gaggaagaggaagaggatatcaccaaaaatgcaatgattatggtgaagaaaggtggagga
aagaaaggagaggctagcagcagtaaaggtgaaggtcgtggtggaggtagtaatagaggt
gctggcaggggtggaagtagtaacagaggtgctggcaggggtggaagtagtaacagaggt
gctggcaggggtggaagagggagaggcaaaaagtga
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