Macrobrachium rosenbergii (giant freshwater prawn): 136841086
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Entry
136841086 CDS
T10429
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mrj03000
]
136841086
04121 Ubiquitin system [BR:
mrj04121
]
136841086
Transcription factors [BR:
mrj03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
136841086
Ubiquitin system [BR:
mrj04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
136841086
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZBED1_RNase-like_helical
ZBED1_RNase-like
zf-BED
Dimer_Tnp_hAT
DUF659
hAT-like_RNase-H
FAM200-ZBED5_RNase-like
DUF8247
zf-Di19
Motif
Other DBs
NCBI-GeneID:
136841086
NCBI-ProteinID:
XP_066964239
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Position
8:26362610..26367094
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AA seq
594 aa
AA seq
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MEESGKRSQSIVWDHFEKVAETPNKAKCKICNAKFQHSKNTSNLLKHLTTKHALVYEESM
ERLIAGPSGRQKQQTLEQSLSKRTKYSKNSEKSNKLNKALPEMITTDMQPAYIVEDKGFI
KFVGKLDPCYELPSRRTVMRKLLPEAYEDAKRRLKNTLQDTDHLALTTDIWTSMHIQAYI
CVTGHFITSLWEIKSVVLETAQLLKDHTSETIATELKRIAEEREISNKITLLVTDNASNM
LAAARLCTPWRHIPCFAHTLNLVVTNILEKHEDIVNIRKKVRYIVTFFHSSVKASDRLTE
VQRQQNIPEHKLIQEVQTRWNSTFYIFERMIEQHQAVTTVLCLLGKNEMCPSAQVIEEIK
GTVKVLKPFETATREVSADLPLTISKIIPMARSLQETLSKYAPEITENEKKLYNELMSQL
RRRFSQSELNFSPAAATFLDPRFKKIAFASEANFEQMQRRLTSEMSSMDIKLQPEEEVER
IESATSDTSLWSWIDEKASETERNRTNTVDATLELKQYPAERRIARTEDPLEFWKQHSEQ
YSRLSILAKKLSWPCASTSLLLIDVLALDLAGLCQHGLLLLEQPVMLTDEAARL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaagtgggaaacgttcccaaagcatagtttgggatcactttgaaaaagtagca
gagacccctaacaaagcaaaatgcaaaatctgcaatgctaagtttcaacattcgaagaat
acatccaacttattaaagcatttaactaccaaacatgctcttgtatatgaggagtctatg
gagagattgatagcaggcccaagtggtcgacaaaagcagcaaacattagaacaatcattg
tccaaaaggactaaatattcaaaaaattctgagaaatccaataaactaaataaggcattg
ccagaaatgatcaccacagatatgcaacctgcttatatcgtagaagataaaggattcata
aagtttgtaggcaagcttgacccatgttacgagttaccaagcaggcgaacagtgatgcgt
aaattactacctgaagcatatgaagatgctaaaaggaggttgaagaatactctacaagat
actgatcatttagcacttacaacagacatatggacttccatgcacatccaagcgtatata
tgtgttacaggacatttcataacttctctttgggaaattaaatctgttgttctggaaaca
gcacagctgctaaaagatcacaccagtgaaaccattgcaactgagctcaaacgaattgct
gaagaacgggagataagcaacaaaataactctattagtcactgacaatgcatcaaatatg
cttgctgcagccagactatgtactccatggcgacatataccatgttttgcacatacactt
aacctagttgtcacaaacattctagaaaaacatgaggatattgttaacataaggaagaaa
gttcgatacatagtaacatttttccattcatcagtgaaagcttcagacagactcactgaa
gttcaacggcaacaaaatatcccagaacacaaacttatacaagaggtacaaaccagatgg
aactctacgttctatatttttgaaaggatgattgagcaacatcaagcagtaacaacagtc
ctgtgtcttctcggtaaaaatgagatgtgcccatcggcacaagttatcgaagaaattaaa
ggtacagtaaaagtccttaaaccatttgaaactgccacacgtgaagtgagtgctgatctt
ccccttacaatatccaagattatcccaatggcgcgaagtttgcaagaaactttatcaaaa
tatgcacccgaaataacagaaaatgaaaagaagttatataatgaactcatgtcacagtta
aggagaagattcagccagagtgaattaaacttttcaccagcagctgctacatttcttgat
cctagattcaaaaaaattgcttttgctagtgaagcaaactttgaacagatgcaaagaaga
ttaacttcagagatgagttcaatggacattaagctacagccagaagaagaagttgaacgg
attgaaagtgcaacttcagacacaagtctgtggagttggattgatgaaaaggcatctgaa
acagagaggaatagaacaaacacagtggatgccacattggaactgaagcagtacccagct
gaaagaaggatagcaagaaccgaggatccactggaattctggaaacagcacagtgaacaa
tattcccggctgagtattttagcaaagaaacttagctggccttgtgccagcacgagcctc
ttgcttattgatgttttagctttagatttagctggcttgtgccagcacgggctcttgctc
ttagagcagcccgtaatgcttactgatgaagccgcccgcttataa
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