Macrobrachium rosenbergii (giant freshwater prawn): 136841632
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Entry
136841632 CDS
T10429
Symbol
dor
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj04140
Autophagy - animal
mrj04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
136841632 (dor)
04148 Efferocytosis
136841632 (dor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mrj04131
]
136841632 (dor)
Membrane trafficking [BR:
mrj04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
136841632 (dor)
Hops complex
136841632 (dor)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
zf-rbx1
Beta-prop_RSE1_2nd
zf-RING_Vps41
zf-RING_5
zf-C3HC4_2
TdIF1_2nd
zf-RING_11
Occludin_ELL
zf-ANAPC11
PspA_IM30
DUF1664
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
136841632
NCBI-ProteinID:
XP_066964854
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All DBs
Position
9:complement(26630401..26634681)
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AA seq
967 aa
AA seq
DB search
MATIFDQYESQSQGTGVCLRDSILGTTAFKNQKLEEEAAIFLLDRRVNFSPPHPITHLVV
SNHHLVLAMANKTLIRINLSNPNNLEEIDICKLALQAKIYNIFLDPTGQHLLISIVSKDG
VTPVDTLYLPLRTNKPKSTYKLKGHLVTSVAWSQRNQSESVTGPILVGTSRGLLFEMELT
SDERFFQSGHEEYCKQLIDFGKEKPLAISQVEYRSSPSDDLHFLVLCTTPERIYQLAGRV
KSLEERPMFLSLFNNYLGLPPRFTELPSTWKNSWLQIYHNVNIPKHFAWVVEQGIYYGDV
SWTGLIHEEASIQKGLNPFPASVEGSGPPCGMILCEYHLFIVWSHKIQGICILNNQVVFE
GSVPEDCGKLMGIARDNVRGSIWVYAERAVFKYKVDQEGRNVWRIYLDQGNYDQAKKLCS
NDSSRLYVVLLKEAQDLFEKKDYLRSAKLFAKTLTSFEEVTLKFVEVGEEEALKIYLHEK
LEGLKVSEQTQVTLVVVWLLELYLKKLGNLRDAGEQNTQAYRNYDEQLKAFLQDPKVRQS
IINNSSAVYELLSSHDDHDNYVNVSIMLKDYDRVLRHLIHHGRYIEALEVLSNQGSEKLF
CQHIPTLMKEIPREAVDCLISQGRRLSPVQLLPILVHCHSCHGHGKEVLRYIEYCVDKLD
VTDEVVHNFLISLYVSERPDKLLPYFKLQGDDSQSVHYDLKFALRECISAGEEKACVHIL
TTMGLYQDAVELALKLDTVLAKSTANRPKYDQDLRKKLWLMIAAHVVQEEQDVSRAMDVL
RECDLIKIEDILPFFPDFVTIDQFKDAICSSLQEYNQHIEDLKHEMDDAAKTAENIRKDI
QKFKQKFSFVHAQDRCCECNYPLLTRPFYLFPCSHKFHQDCLSDAVLGYLSETRRKRVSD
LKGKLLAISNDESTTGTGLWGDREQIQSEIDSLVAGECLYCGDNIVSNIDTPFINANEWD
ATMAEWQ
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggctaccatatttgaccagtatgaatcccagtcgcagggaactggtgtgtgccttagg
gattccattttgggaacgactgcattcaagaatcagaaactggaagaagaagcagccatc
ttcttgttggatcgacgtgtcaacttttcacctcctcatcccattacacaccttgttgtt
tccaatcaccatcttgtcctcgcaatggcaaataaaacgctgattcgaataaatttgtca
aatccaaataatttagaggaaattgatatatgtaagttagctctacaggctaagatttat
aatatttttcttgatcctactggtcagcatttgctcataagcattgtaagcaaagatggt
gtaactcctgtcgatacactgtatttaccattaagaacaaataaaccaaagtctacttat
aagctgaaaggacatttagtgactagtgttgcatggagtcagagaaatcagtcagagagt
gtaacaggacctatcctcgtaggaacttcgagggggctgttgtttgagatggagttaacg
tcagatgaaagatttttccagtctggtcatgaagaatattgtaaacaacttattgatttt
ggcaaagaaaaaccattggctatatcacaagtagaataccgtagtagtccttcagatgac
ctccactttttggtgctgtgtacaacaccagaacggatataccagcttgcaggtcgtgta
aagtctcttgaagaaagacccatgtttctttcactttttaataactatcttggtctgccc
ccaagattcactgaacttcctagtacttggaaaaattcatggcttcagatttatcataat
gtgaatattccaaaacattttgcttgggtggtagagcaaggcatttattatggtgatgtg
tcttggacaggactgatccatgaagaagcatctattcagaaaggcttgaatccattccct
gcgagtgttgaaggaagtggccccccgtgtggtatgattttatgtgaatatcacctcttt
atagtttggtctcacaaaattcagggcatttgtatccttaataatcaggtggtttttgaa
ggctcagtgccagaggactgtggaaaactgatgggaatagctagagataatgtacgtggt
tccatctgggtctatgcagagagagcagtgttcaaatacaaagtggatcaagagggacgt
aatgtgtggcgtatatatttggaccaaggcaattatgaccaagcaaaaaagctgtgcagt
aatgattcttcacgcttgtatgttgtattgctgaaagaagcccaagatttgtttgagaaa
aaagattatcttcgcagtgcaaagctctttgccaagacgctaacatcatttgaagaagtt
acgctaaaatttgttgaagtaggcgaggaagaggctttaaagatttatctccatgaaaaa
ctggaaggtttgaaagttagtgaacaaacgcaggtgacactagtggttgtttggctactt
gagttataccttaagaaattaggaaatttgcgagatgcaggtgagcaaaacacacaagcg
tatcggaattatgatgaacaactgaaggcattcttacaagatccaaaagttcgtcagagc
atcataaacaattcttcagctgtctatgagttgttgtcatcccacgatgatcatgacaat
tatgtaaatgtttcaataatgttgaaagattatgatagagttctgcggcacttgattcat
catggccgatatattgaggcactggaggtcttgagtaaccaaggatctgaaaaacttttt
tgtcagcacattccaactctcatgaaagaaatacccagggaggctgtggactgcttgatt
tcgcaagggagaaggcttagtcctgtgcagcttttaccaattttagttcactgccattca
tgtcacggacatggcaaggaagtgcttcgttatatagagtactgtgtggataaattagat
gttacagatgaagttgtacataatttcttgataagtctgtatgtcagtgaacgtcctgat
aagttgttgccctattttaaattgcaaggtgatgatagtcagagtgttcactatgatctt
aaatttgcactcagagaatgcatatcagctggagaagagaaagcttgtgttcatattttg
accacaatgggcctttatcaagatgctgttgaattagccctcaaactagataccgtgttg
gcaaaatcaactgcaaatcgtccaaaatatgatcaagatttgcgcaaaaaactgtggctg
atgatagcagcacatgttgtacaagaagaacaggatgtgtctcgagcaatggatgttcta
cgtgaatgtgacctgattaagattgaagatattttaccatttttcccagactttgttact
attgatcagttcaaggatgccatttgttcttcacttcaggaatacaaccaacacatagaa
gacctaaagcatgagatggatgatgctgcaaaaacagcagaaaatatcaggaaagacatt
caaaagtttaaacagaaattctcttttgtgcatgcacaagatcgatgctgtgagtgtaat
taccccttattaacacgtccattttatttattcccctgttcccataaattccatcaggat
tgtctctcagatgcagtattgggttacctaagtgagacaagacggaaaagggtatctgac
ttgaaaggaaagttgttggcaatatcgaatgacgagagcacaacaggaactggtctttgg
ggtgacagagagcaaattcaatcagaaattgatagccttgttgcaggagagtgtttgtat
tgtggtgataatattgtttcaaatattgacacaccttttattaatgccaatgagtgggat
gcaacaatggcagagtggcaatga
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