Macrobrachium rosenbergii (giant freshwater prawn): 136842595
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Entry
136842595 CDS
T10429
Name
(RefSeq) transcription factor SOX-3-like isoform X1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mrj03000
]
136842595
Transcription factors [BR:
mrj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
136842595
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
136842595
NCBI-ProteinID:
XP_066966271
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Position
10:37145789..37157254
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AA seq
461 aa
AA seq
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MYPTMMESMPVSYASTMGGMMGHYFGGGSAAAMGVGAGVGQLPTAHHSSPHVQQQATQQP
TPQHEPSNVLQQQATHVTSHASAQNAPDTLTTSHPHLRQAALVTPVSTPSPADSTASGCS
PSGSAQKKENGPKDDHIKRPMNAFMVWSRMQRRKIAQENPKMHNSEISKRLGAEWKLLTE
AEKRPFIDEAKRLRAQHMKDHPDYKYRPRRKPKTLKKDGYPYSIPYPAVSMDPLRGGFPS
QLSPYYSASAAAANYGSITAAHMAAAAAAAAAAQQQLSSQTSQSSPVGYGYDATKYSSYM
SSSSSYPMSMYGSASDPAKYGDASKAAAAAASVAVGGYEAAKSYLDSSKYLSDKYGLEKS
SSSYLDKASQEPKDTEMKSASPGVASVNPSPISGYGSAAGALSNYYSQAAGTSAFQPSGA
LSQGVPSTMAGLLQPSQVASYTNSQYPPVGADYRRPLSVIF
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtatccgacaatgatggaatcgatgccagtctcctacgcaagcacgatgggcggcatg
atgggccactacttcgggggtggcagcgctgctgccatgggagtaggtgcgggcgttggt
caactgcctacagcgcatcacagcagccctcatgtgcaacagcaggcgacgcaacaacca
acaccgcaacatgaacccagcaacgtattgcaacagcaggcaactcacgtcacatcgcat
gcgtctgcgcaaaacgcccccgacactctgacaacaagccaccctcatcttcgccaggct
gccctagtgacgcctgtgtcaacaccttcccctgcggattccacagcgtctgggtgttcc
ccaagtgggtctgcgcagaagaaagagaacggacccaaggatgatcatataaaacgacca
atgaacgcattcatggtttggtctcgcatgcaaagacgcaagattgcgcaggaaaatccc
aagatgcacaattccgaaatctccaagaggctgggagcagaatggaaactccttaccgag
gctgaaaagcgcccctttatagacgaggccaaaaggttgagagcgcagcacatgaaagat
cacccagattacaagtaccgacctcgcaggaagcccaaaaccctcaagaaagacggatac
ccatacagcatcccgtacccagctgtctccatggatcctttgagaggaggtttcccttcg
cagctttctccatactactctgccagcgcagcggcggctaactatggttcaattactgct
gcacatatggcagctgctgctgccgctgcagctgcagcacagcaacaactttcctcccag
acttcgcagtcgagtccagtcggctatggttacgatgcaacgaagtacagcagttacatg
agcagctcctccagctacccaatgagcatgtacggttcagccagtgaccccgccaaatac
ggggatgcaagcaaagcggccgcagccgctgcgtccgtcgcagtgggaggatacgaggca
gctaaatcctacttggacagtagtaaatacttgtcggataagtacggcttagagaagtcc
tctagctcttatctcgacaaggcttcccaggaacccaaggatacggaaatgaaaagtgcg
tctcctggtgttgcaagtgtcaatccaagccccataagcggatatggatcggctgccggc
gccctcagcaactactacagccaagctgctggcacttcggcttttcagccttcaggagca
ttgagtcagggcgtgccctcgacgatggccggtcttctacagccctctcaggtcgcctcc
tatacaaactcccagtaccctcctgtaggagccgattacaggaggcccttatccgtaata
ttttag
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