Macrobrachium rosenbergii (giant freshwater prawn): 136843142
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Entry
136843142 CDS
T10429
Name
(RefSeq) endoribonuclease Dcr-1-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
Chromosome and associated proteins [BR:
mrj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
136843142
microRNA pathway
RISC loading complex
136843142
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GFIT
Other DBs
NCBI-GeneID:
136843142
NCBI-ProteinID:
XP_066967294
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Position
11:11452030..11543599
Genome browser
AA seq
2384 aa
AA seq
DB search
MNRVQPENVHSTIFTPREYQVELVDASLRGNVLCVLASRSTRTFLITMVTRELAHLTRSA
DQGGNDHRTLIVGWSGPGLVRAGEAIQQNTNLAVTTYTSLDQVENWVPSRWRQAFREAQV
LIMTVDVLEKGLETGVLPFNRFNLLVITDAHRLPTSSTLLEVLKECNGCRILGMTSPVLG
QACSPPQLESFLTHLQDVSSCHVDTASEIVTVLRYVNKPVEKIVMCKNPHPDDRTEVELE
VRRLVEDALSFLNDHRYDLVEVYGPEYQEFCENIPDPNYEPRQILLDFLDVLNDLGLWCA
DRAALYALVEVEKLKKKTAYDRHYLLLCMIFTVMARIRAVVEEAFEKHSELDQILKFSSP
KVLRLVEILRQIRPLNFIDPRKRRDKSDAGDMKSDSSDPLIKESQNSCKTTDSSVDEKAE
LIQDIGKKDSNSVSDDLNSASDDVGNSEELKECSKCSYPQLTINAEDPAFEKENSKNIEL
SSYDHLCKHNRSDKFKPCSVCKEPSTNPVNEGSSNHICESLSSNDVLEDLECIVPNHEKK
LAVCCCNTSSKSFDVENISDICKEKNYTLPFCGKCESVQISLDTCCNNCEVMKNHKKKEE
SSCLEDSLCRLSIKEPNCCIDGCDTECLRTCDFHNDLSSAKGKEKSSIAIESSKLCNGFV
ENGENGLSGQVKNTEIVHAVNGYLGVEHDCETGECVCIQTDTNPTCIECCESVQKSLSEE
SNGVKVSHNEACAHHSTSKQCHATPSNDSDAIFSEQVPVVSDASQKQEDQPPVISSGKTD
KTATVADSGSKSTVPTPISSEAAAMADTLALLLPSTNKGRKRRDEVKEKVKVHNPEDPDS
VCGLIFVHHRNIAKIIYRLLKELSDIGGDFAWIFPQYTVESKECIKDDPRAAEAEHKKQE
EVLRRFRHHECNILVSTKVLEEGIDVPQCNLVLRFDPPADYRSYVHSCGRARGHDTFYFH
LVTKDQEQDFLKKMATYSAFQQVLLNYCGSVEVGTDKEVLPEEANAAHLPYITPGHAEVT
MDSSIGLLNKYCAKLPSDTFTRLTAMWEVEELKETVNFGEEFVYRCKIMLPINSPLKGTI
EGPWQKKVSLAKMSAALKCCRCLHEMGELDDQLQPVGKESMNLDDHLCPPPVDDQVPEGM
PRPGTTKRRQYYYKKVADCLTGDQPREELELFVYKLDMVLTCPIPDEQNTRGRKIYRPEQ
STRSLGIVTTKPISKVSGFPVFTRSGEVVIRIKEIGSNVHMTKDQLMSLQCFHKFTFTHV
LRLEKYPIKFDPTNAKTAFYIVPLNKFVGYEGIDWDFIKEIEMEGDPRPVPPEDAARKKF
HFEHGLYEDAVVMPWYRNQDQPQYFYVAEICTHLNPQSDFPDAGFETFEKYYLTKYGLQI
CNLSQPLLDVDHTSGRLNLLTPRHVNRKGVALPTTSEETKRAKRENLQQKQILVPELCTI
HPFPASLWRKAVCLPTILYRINALLLADQLRLCVAREVGLGLEVLPQDFDWPPLDFGWSL
ADVLKKNQENQQQQQQESFEKANDSNTNKQMKKKLESPTDSSPTPSKKKITKNGIDMEIG
TWSNDMAVDPPTPPFDMNADMSTADDFEIDTFDPNVALPDNLTLLDGFTANDDIEGELGA
DWGTGITERRSKSGCHKESGEVFRVGSPSNFEADGWDMFSGPENSYGGYGAYDAYGGYGD
FQGLADDLEGCESDVSSDMEDDDKSQIDKWDEEGSKGRSGLVADEGSSDEEVDLHWPFCD
DDSIRIAKETEFQKYLDEKYESILSSPSYLSESDPLVIEKTFRKNVSDKVTTCKDVASVT
KSTFQGCEQKVSKGCDNAQLSTSTVALTVNRTETLTISIQDIGAEISTWENDNNEIQFSF
DFQPDLLNHPGPSPSVILQALTMSNANDGVNLERLETIGDSFLKYAITTFLYCTYPQRHE
GKLSYLRSKQVSNLNLYRLGKRKGLGECMVATKFEPHDNWLPPGYFVPRELEEALIDSGV
PAGHWNMADLPGLHDLASDEIRRLVQERSEQIKRSKNEQVTTELMATQNPHDLPIFIPYN
LLTQHSIPDKSIADCVEALIGAYLTTCGPRGALLFMSWLGIKVLPYKIEKGSASEEIIYG
HLDPPQSPLHHCPVVETEKQLELLLSGYKVFEEKIGYHFRDRSYLLQAFTHASYYKNRLT
DCYQRLEFLGDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVKYDYHKYF
RHFSPGLDRVVRDFVKMQEENGHKINEEYYFMEEDECEAAEDIEVPKALGDVFESVAGAI
FLDSGRSLDAVWTVYYKMMCREIEQFSGVVPKSPIRELLEMEPETAKFGKPERLVDGKVR
VSVEIFGKGSFSGVGRNYRIAKSTAAKRALRHLKKLQMIANQGV
NT seq
7155 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgagtgcagccagaaaatgtccactccaccatttttactccccgtgagtatcag
gtggagttggtggatgcttcccttcgggggaatgtactgtgtgtgcttgcttcacgttcc
actaggaccttcctcatcacaatggttactagggaactggcacatcttacacgcagcgct
gatcagggaggaaatgatcaccggaccttaattgtgggttggtctggtccagggttagtg
cgtgcaggtgaagccattcaacaaaatacaaatctggctgtgactacttacacaagtctt
gaccaagttgagaattgggtaccatcaagatggaggcaggcatttcgagaggcccaggtt
ttgatcatgactgtagatgttttggaaaaagggttggaaactggagttttgccgttcaac
aggttcaacttgctagttatcacagatgcacatcgcctcccaacttcttcaacactatta
gaggttttgaaggaatgtaatgggtgccgcattttgggtatgacttcacctgtgcttggt
caggcatgctctcctccacagttagaatccttccttacacatcttcaagatgtttcttcc
tgtcatgtagatacagcttcagaaatagttacagtgctgaggtatgtgaataagccagtt
gaaaaaatagtaatgtgcaagaatccacatccagatgatcgtactgaagtagagctggaa
gtacgacgcttagttgaagatgccttaagtttcttgaatgatcatcggtatgatctggta
gaagtttatgggccagagtatcaagaattttgtgagaatatcccagatccaaattatgaa
cctagacagatacttcttgattttcttgatgtgctcaatgatttaggcttgtggtgcgct
gaccgtgcagcactgtatgcattggtagaagttgaaaagttgaagaagaagacagcctac
gatcgacattatctcctgctgtgtatgattttcaccgtgatggctagaataagggctgtt
gttgaggaagcatttgaaaaacattcagaattggatcagattttaaaattttcatctcct
aaagttcttagattggtggaaatattgcgtcagattcgtccactgaactttattgatcca
cgtaaaagaagggataagagtgatgctggtgatatgaaatctgattcctctgatccccta
attaaagaatcacaaaattcttgcaagaccactgattcttcagtggatgagaaagcagag
ttaattcaagatatagggaagaaagattcaaattctgtttctgatgatttaaactctgct
tcggatgatgtgggaaattctgaggaattaaaggaatgttcaaagtgttcatatccacaa
ctgactataaatgcagaggaccctgcatttgaaaaggagaattccaaaaacattgagctc
tcatcttatgatcatttatgcaaacataatagatctgacaagtttaagccttgcagtgtt
tgtaaagaacccagtacaaaccctgtcaatgaaggttcctctaatcacatatgcgagtca
ttaagttctaatgatgtccttgaggatttggaatgtattgtacctaaccatgaaaaaaag
ttggctgtgtgctgttgtaatacatcatctaagtcatttgatgtagaaaatattagtgat
atttgtaaagagaagaattatacattgccattttgtggcaagtgtgaatcagtacaaatt
tctctggatacctgttgtaacaactgtgaagtcatgaaaaaccataaaaagaaagaggaa
agctcatgtttagaggacagtttatgtaggcttagtattaaggaacctaattgttgtatt
gatggctgtgacactgaatgtttaaggacctgtgatttccataatgatttatcaagtgcc
aaaggtaaagaaaagagttctattgctatagaaagtagtaaattgtgtaatggatttgtt
gaaaatggagaaaatggattaagtggtcaagtaaaaaatactgaaattgtgcatgcagta
aatggttatctcggtgtagagcatgattgtgaaacaggtgaatgtgtttgtatacagaca
gatacaaatcctacctgtattgaatgctgtgaatcagtacaaaaatcacttagtgaagaa
agtaatggtgttaaggtttcacacaatgaagcttgtgctcatcattctacctcgaagcaa
tgtcatgctacacctagtaatgatagtgatgccatattcagtgaacaagtcccagttgta
tctgatgcttcacaaaagcaggaggatcaacctcctgttatttcttctggaaagactgac
aaaactgcaactgtagctgattctgggagcaagtctactgtcccaacaccaatatcttct
gaagcagcagcaatggcagatactttggcattgttgctcccttccactaacaaagggcgt
aaacgtcgagatgaggtcaaagagaaagtgaaagtccataatccggaagatccagattct
gtgtgtggccttatttttgttcatcatcgtaacattgccaaaattatatatcggctgttg
aaggagttgagtgatattggaggagattttgcttggatatttcctcagtacactgttgag
tcaaaggaatgtatcaaggatgaccctagggctgctgaggcagaacataaaaagcaggaa
gaagtattgagaaggtttcgtcatcatgagtgtaatattctagtgtcaactaaagtacta
gaagaaggtattgatgttccccagtgtaatttagttttgaggtttgatccacctgccgac
tatcgttcatacgttcacagctgtggtcgtgcaaggggacatgacaccttctactttcat
cttgtcaccaaggatcaggaacaagatttcttaaagaaaatggccacctactctgcattt
caacaggtgttgcttaattactgtggtagtgttgaggttgggactgataaagaagtgttg
cctgaggaggcaaatgcagcgcacttaccgtatattactccagggcatgctgaagtgacc
atggattcttcaattgggctcttgaacaagtattgtgccaagttacccagtgatacattt
actcggttaactgcaatgtgggaagtagaggagttgaaggaaactgttaactttggtgaa
gagtttgtgtatcgatgtaagataatgcttccgatcaactctcctctgaaaggcaccata
gagggtccatggcagaagaaggtatctctagcaaaaatgtcagctgctcttaagtgttgt
cgttgccttcatgagatgggcgaattagatgaccagctacaaccagtagggaaagagagt
atgaatttggatgaccacctttgtccaccacctgtggatgatcaagttccagaggggatg
ccccgtcctggtactacgaaacgccggcaatattattacaagaaggttgcagactgttta
actggtgatcagccgagagaagagttggaattatttgtatataaattggatatggttttg
acatgtccaatcccagatgaacagaatacccgtggacgcaaaatttaccgtcctgagcaa
tctacacgatcacttggtattgtaactacaaaacctatatccaaggtcagtggattccca
gtgtttacaaggtcgggagaagttgtcattcgtattaaagagattggcagtaacgttcac
atgacaaaggaccagttgatgtccttgcagtgtttccacaaattcacctttactcatgtt
cttcgactggaaaagtaccctatcaagtttgatcctaccaatgctaaaactgcattttac
attgttcccttaaacaaatttgttggctatgaaggaatcgactgggatttcataaaagag
atagagatggaaggtgacccaagaccagttcctcctgaggatgcagccaggaaaaaattt
cattttgagcatggtctttatgaggatgcagttgtcatgccatggtatcgaaaccaagat
cagccgcagtacttttatgttgctgaaatctgcactcacctcaacccacagagtgatttt
ccagatgctggatttgaaacttttgaaaaatattatttaaccaagtatggccttcagata
tgcaacttgagccaaccgctactggatgtggatcacacatctggtcgacttaatctcctc
actcctaggcatgttaataggaagggtgtagcacttcctaccacatcagaagaaaccaag
agagcaaaacgtgagaacttgcaacagaagcaaatcctggtacctgaattatgtacaata
catccattccctgcttctctttggcgtaaagctgtgtgtttacccacaatattgtaccga
atcaatgcattacttcttgctgatcaactccgtttgtgtgtagcacgtgaagtgggtctt
ggccttgaagttctacctcaagattttgattggcccccattagattttggatggagtctt
gcagatgtcttaaagaagaaccaagaaaatcagcaacagcagcagcaggaatcttttgaa
aaagcaaatgacagcaacaccaataagcagatgaagaagaagctagaatcccccacagat
tcttctcctactccttcaaagaaaaaaatcaccaaaaatggcattgatatggagattggc
acttggtcaaatgacatggctgtggacccaccaacaccaccttttgatatgaatgctgat
atgagcacagctgatgattttgagatagacacttttgatcctaatgttgctttaccagat
aaccttaccctgctggatgggtttacagcgaatgatgatattgaaggagaactaggtgct
gattggggcactggtattactgaacgtagatctaaaagtggatgccacaaagaaagtggt
gaagtattccgtgtgggctctccatctaattttgaagctgatggttgggatatgttcagt
ggcccagaaaatagttatggtggttatggagcttacgatgcatatggtggctatggagac
ttccaaggcttagctgatgatttagagggctgtgagtctgatgtgtcttcagatatggaa
gatgatgacaagagtcaaattgacaagtgggatgaagaaggtagcaagggtcgatctgga
ctggttgctgatgaggggtcatcagatgaagaggttgatttgcattggcctttttgtgat
gatgacagtatcagaattgccaaggagacagaatttcagaaatacctagacgagaaatat
gaatcaatattgtcaagtccatcttatttgtcagagagcgacccattagtgatagaaaaa
acattcaggaagaatgtgagtgataaagtcacaacatgcaaagatgttgcatctgttaca
aaatctacatttcaaggctgtgaacagaaggtttctaaaggctgtgataatgctcaacta
tctacctcaactgttgctctgactgtgaatcgcacagaaaccctcaccatttccatacag
gatattggtgctgaaatatccacatgggaaaatgacaataatgagattcagttcagtttt
gactttcaaccagatcttttgaaccatccaggaccttctccaagtgttattctccaagct
ttaaccatgtcaaatgcaaatgatggagttaatctagaaaggttagaaactattggagat
tcatttctcaaatatgccattactactttcctgtactgtacatatcctcagcgccatgaa
ggcaagctcagttatttacgctcgaaacaagtcagtaatcttaatttgtatcgtttaggt
aagaggaagggcttgggagaatgcatggttgctacaaagtttgaaccccatgataactgg
ttgccccctggatattttgtcccacgtgaattggaagaagctctcattgactctggagtt
cctgctgggcattggaatatggctgatttgccaggattacatgatttggctagtgatgaa
ataagaaggttggtacaggaacgttcagagcaaatcaaacgaagcaaaaatgaacaagtt
accactgagttaatggcaacacagaatcctcatgacctccccatcttcatcccatacaat
ttattaactcaacatagtatccctgacaaaagtattgcagattgtgttgaagctttaatc
ggtgcttatctgactacttgtggtccacgtggtgctttattgttcatgtcatggttaggg
atcaaggtgctgccatacaaaattgaaaaaggttcagcaagtgaagaaatcatttatggg
catttagatccaccacagtcaccacttcatcattgtccagttgttgaaacagaaaaacag
ttggagttattactgagtggatataaagtctttgaggaaaaaattggctaccattttcgt
gatcgctcatacctcttacaagcctttacacacgcttcgtactataagaaccgtttgaca
gactgctatcagaggttggagttcttgggggatgcagtactagactacctaataactcga
cacctttatgaagataagcgacagcattcacctggtgctttgacagatctacgatctgct
cttgtcaacaacactatttttgcctccctagcagtaaagtatgactatcacaaatacttc
cgtcatttttcacccggcttagaccgtgttgttagggattttgttaaaatgcaagaggag
aatggtcataaaattaatgaagagtactacttcatggaagaagatgaatgtgaagcagcc
gaggatatagaagtccccaaagcacttggagacgtgtttgagagtgtagctggagccata
tttcttgattctggtaggtctcttgatgctgtatggacagtttactataaaatgatgtgc
cgagaaatagagcagttcagtggagttgtgcccaagtctccaatcagagaattattagaa
atggaacctgaaactgccaaatttggcaagcctgaacgacttgttgatggaaaagttaga
gtatctgttgagatttttggaaagggttcattttctggagttgggcgtaattatcgcatt
gctaaatctaccgcagcaaagcgagcactcaggcacttgaaaaagttgcagatgatagcc
aatcaaggtgtgtaa
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integrated database retrieval system
