Macrobrachium rosenbergii (giant freshwater prawn): 136843178
Help
Entry
136843178 CDS
T10429
Name
(RefSeq) integrin alpha pat-2-like
KO
K06584
integrin alpha 8
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj04512
ECM-receptor interaction
mrj04518
Integrin signaling
mrj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
136843178
04518 Integrin signaling
136843178
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
136843178
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mrj04515
]
136843178
Cell adhesion molecules [BR:
mrj04515
]
Integrins
Integrin alpha subunits
136843178
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FG-GAP
FG-GAP_3
Integrin_A_Ig_3
Motif
Other DBs
NCBI-GeneID:
136843178
NCBI-ProteinID:
XP_066967350
LinkDB
All DBs
Position
11:14467660..14493422
Genome browser
AA seq
1019 aa
AA seq
DB search
MIMKVTVFVLGMSLLQHALTFNIDIKSSVSVTGPAGSNFGFSVAMWWRDGMSRLVIGAPG
YSASGGNWLQHHPIQEGAVFLCNFTEDMSYESCNLLSRNFDVTDAQDMTRNLEEFGFGST
VVAGGRNNTSLLVCAPQSYNVFKRGQFHSYKTLGECVLLDSSSSSGVRIKPNEGGQEYID
DFVYCGFSASFSKDNTAVFMSCPSISLDSSKFKIITYNITTRRVQQFDLTDICDGNYYKG
WHVAPVSHEDGIVASCVGTGQVNAKVIKTDGSPHSSQSLDVAGLTVGERAGFSLETCDVD
GDGEDEVVVGAPFGRVHREYASSLWMETGKIVVLGNRGKHSTYDGPQEFNRFGSSIACLG
DLNKDGYQDIAVGAPQHSKGGAVFIYSGSREGLRQQPSQVIHGTDVKPHMVGFGYSLASG
HDLDGNGYPDLLVGSPQSNAVVSLRTAPVIKIGVHSFRFSEEQVDLQRPDHTLHLIVEVD
YHSERNFVVEMDWILNLDVNQRWGKRILFEENSQASLKRRIKLENVGINNFSFPVYIEIS
SSEDVVDVSYSDLKMSFIEVRSLTGETIAPVLEDLENPGTQWKDLVRTTSVRLSCSSNIT
SCIATTNIMIETKTQRMPFDVGLRDVELTIDLTVENATAFDPTLTLMTPQGLVLRRAYFT
NTLIDLSCQSDSSCLASSEACLPVQVCTSSRTKLRPADEASIALLFKQKREEVISFTNNH
PDPQMNFSVTVGSVNEDFDESDNTLSLTFLPQVSPDFYILGLSAPETLSVEASSSTGDDG
VNMTRVQDVFLASDHLNKSDFGPTVKHSYDLTERGDIPLEEIQVDMYWPTRNGTDNRTIS
LLKTSPKVFPSAAGMCQYNGTFWDHSTFLDNSSFVYAIFSCTVRPGSQKGKITLTTEAVL
VKSYFMNAPSSVSLRSQITGRIVSPTSWHFSSSLDKQESEEVMRTLAVLTKVSVIHERGN
QLPAPWIIILSVLSGLALLGILVYGMYKVGFFKRRLVPRFQKHEEAIETNNEDSLSNGN
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgaaagtcactgtcttcgttttgggcatgtcccttttacaacacgcgcttacg
tttaacatcgatattaagtcttctgtctctgtaactggtccagctggttcaaactttgga
tttagcgtcgccatgtggtggagagatggaatgtccagattagtcattggggctcctgga
tacagtgcgtctggaggaaactggctgcagcaccacccaatacaagaaggagctgttttc
ttgtgtaacttcactgaagatatgtcttatgaaagctgcaatttactgtcaagaaatttc
gatgtgacggatgctcaggatatgacgagaaacctggaagagtttggatttggttcaact
gtggttgctggtggtagaaataatacttccctcttggtgtgcgcgccgcagtcgtacaac
gttttcaaaaggggtcaatttcattcttacaaaacacttggcgaatgtgtactactggat
tcttcttcttcatcaggagtgagaataaaaccgaatgaaggtggtcaagaatacatagat
gacttcgtgtattgtgggttttcagcttccttttccaaagacaatacagcggtcttcatg
agttgtcccagtattagtttagatagcagcaaattcaagataataacctacaatataacg
acaagacgggttcagcaattcgatctaacagacatttgtgacggaaattactacaaagga
tggcatgttgctcccgtcagccatgaagatgggattgtagcatcttgcgttggtacagga
caggtaaatgcgaaggttatcaagactgatggtagtccgcactcgagccaatcactcgac
gtcgcaggcttgaccgtcggagagagggcgggcttcagcctcgaaacctgcgacgtcgac
ggagacggtgaagatgaagtggttgtcggagcgccctttggtcgcgtacatcgggaatat
gccagctctctttggatggagactgggaaaattgttgttttgggaaataggggtaaacat
tcgacttatgatggcccacaagaattcaacagatttggctcaagcatcgcgtgtctggga
gatttaaacaaggacgggtaccaggatattgcagtgggagcgccacaacactccaagggc
ggagctgtgttcatttactcgggttccagggaagggctcagacaacagccatctcaggtg
atccacggaacagatgtcaaaccacatatggtcggatttggctacagcctggccagtggc
catgacctcgatggcaacgggtatcctgatttactcgttgggtcaccacagtctaatgcc
gtcgtttctctcaggacggcgcctgttataaagattggtgttcattcattccggtttagt
gaagaacaagttgatcttcagaggcctgatcatacccttcaccttatcgttgaggttgat
tatcacagtgaacgcaattttgttgttgaaatggattggattttaaatctcgatgtcaac
cagaggtggggaaagcggattctgttcgaagaaaacagccaggcttcccttaagcgacgc
ataaagctcgaaaacgttgggatcaataatttttcctttcctgtatacatagagatctca
agctccgaagatgtggtggacgtttcttactctgacctgaagatgtcatttatagaggtc
agatctttgaccggggaaactattgcgcctgtcttggaggaccttgaaaatccagggacg
cagtggaaggatctcgtaaggacaacatccgtcagattaagctgcagcagcaatattacc
tcttgcattgccactaccaacatcatgatcgaaacaaaaacgcaaaggatgccttttgac
gttggtttgagagatgtagagctaacaattgacctaacggtggagaacgccacggccttc
gatcctactctcaccctgatgacgcctcagggactggtattaaggagagcttacttcact
aatacccttattgacctttcctgccaaagtgatagcagctgtttggcgagtagtgaagcc
tgcctacctgttcaagtctgtacctcttcccgcacaaagctgagacctgctgatgaggca
agcattgcactcctgttcaaacaaaagagagaagaggtaatttccttcaccaacaatcac
ccagacccgcaaatgaacttctctgtgacagtgggatccgtcaacgaagattttgatgaa
tccgacaacactttgagcttgacattcctgccccaagtttcaccagacttctacatctta
ggactgagcgctccagaaacattgagcgtagaggcctcctccagcacgggtgatgatggc
gttaacatgacaagagtccaagatgtttttcttgccagtgatcatctcaataagagtgac
ttcggccctacagtgaaacactcctatgatctgacagaaaggggggacatccctctggag
gaaatccaggttgatatgtattggcctactcggaatgggacggacaacaggaccatctcg
cttctgaagacatcaccaaaagtttttccttcagctgctggtatgtgtcagtacaatggc
accttctgggatcattctacgttcttagacaactcctccttcgtctatgccatttttagt
tgtacggtgcgtccaggatcgcaaaagggaaagataacgctaacgacagaagccgttttg
gtcaagtcctactttatgaatgcaccgagttcagtcagtctgagatcacagatcacaggg
aggatcgtaagccctacttcttggcatttcagttcctcgttagacaaacaggaaagtgag
gaggtcatgcgaaccctcgccgtcttgacgaaggtttcggtcattcacgaaagagggaat
cagctgcctgctccgtggatcattattctctccgtgttatcgggattagcactgctgggg
atcttggtctatggcatgtacaaggtgggatttttcaagagaagattggtccctagattt
caaaagcacgaggaagctattgaaaccaataacgaagactcgctttcaaatggaaactag
DBGET
integrated database retrieval system