Macrobrachium rosenbergii (giant freshwater prawn): 136843333
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Entry
136843333 CDS
T10429
Name
(RefSeq) RNA-binding protein FXR1-like isoform X1
KO
K15516
fragile X mental retardation protein
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrj03019
]
136843333
Messenger RNA biogenesis [BR:
mrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
136843333
Factors involved in mRNA localization
Other mRNA localization factors
136843333
mRNA cycle factors
Stress granule specific factors
136843333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_9
KH_1
Tudor_FRX1
Agenet
FXMRP1_C_core
Motif
Other DBs
NCBI-GeneID:
136843333
NCBI-ProteinID:
XP_066967720
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All DBs
Position
11:complement(38204598..38298735)
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AA seq
650 aa
AA seq
DB search
MDELYVEVLGPHGAYYKATVIDMGGDEVTVRYEGEWCPETRVAMTGVRLPPPPSPLPTEY
PEGAEVEVYDQLTTAPYRAYWKATVKMSKGDFHVVEFTGVSLTGGENIFPSEKVRPRNTN
PPITSKTFTKFEIEVPEDIRDYARMETVHKPFKKACGASSCVYNPETHSLTLLSRNDQCP
KLANMLADMHFRNLKQKVVLLCRTEEAAKQLESTRLQTTAGYVEEFSVREDLMGLAIGAH
GANIQQARKIEGVTNIELEENTCVFKIYGESEDAVKKARAMLEYSEESVQVPRVLVGKVI
GKNGRVIQEMVDKSGVVRVKIEGDNEPEPTTPRAEGQVPFVFVGTVEAIANASILLEYHL
AHLKEVEQLRQEKLEIDQKLRNMHSTNSLGTNQGYQLRRNDRMHRRAPPSTRERYSSPAL
IWGYNSDVETGGRGRGRGGPRGRGRGGGRGSDRYSNDRSGTAPWSRQGTPDWDEGDASLP
PRTARRHNDERRRVADEEETVLDAAETGSVGSLDRESVTSEGKRRRRRHRKFRRRGGGGG
GEGGDGTSADEGWSTSANESWGGDEGWAASTGENWEPQPSGRNNVERNAGGDQGGRRGGG
RGHPDRPPSREGTLPRRRPPRHEGTPARQSPGRRPPQQPRRSHQPAVNGN
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctgtatgtcgaagtcttgggccctcatggcgcctattataaggcaactgtt
attgatatgggtggagatgaggtgactgtacgatatgaaggagagtggtgcccggaaaca
agggtggcgatgacaggggtcagacttcctccacctccaagtccgcttcccacagaatat
cctgaaggagcagaagtagaagtttatgaccaactaacaacagcaccctacagagcgtac
tggaaagctactgtaaaaatgtctaaaggagattttcacgtcgtagagtttactggtgtg
tccttaacaggtggtgaaaatatattcccatcagaaaaagtacgtcctcgtaatacaaat
cctcctatcacctcgaagacatttacaaaatttgaaattgaagttccagaagacattaga
gactatgcgcgaatggagactgttcataagcctttcaagaaagcctgtggtgcatctagt
tgtgtatataatcctgaaactcacagtttgacgttattatcgcgtaatgaccagtgtcca
aagttagccaacatgttagctgatatgcattttcgaaatttaaaacaaaaagtagttctt
ttatgtcgaacggaggaggcagcaaagcaactagaatccacgcgacttcagaccacagca
ggatatgtagaggagtttagtgtgcgtgaagatctaatgggtttagctataggtgcccat
ggagctaacattcagcaggcgaggaagattgaaggtgtcactaatatagagcttgaagaa
aacacttgtgtttttaaaatttatggtgaatcagaagatgctgtaaaaaaagccagagca
atgttagaatacagtgaagaatctgtacaagtaccaagagttttagtaggaaaagtaatt
ggaaaaaatggccgtgttatacaagaaatggtcgacaagtctggagttgttcgggtgaag
atagagggtgacaatgaaccagaaccaaccacaccacgtgccgaaggccaagttcctttt
gtctttgttggcactgtagaagccattgccaatgctagtatattattggaatatcatcta
gctcatttaaaagaagtagaacaactaaggcaagaaaaacttgaaatagatcagaaatta
agaaatatgcattctacaaatagtttagggacaaaccaaggctatcaacttaggagaaat
gataggatgcatcggagggctcctccgtctacccgcgagcgctactcaagtcctgcctta
atatggggttataatagtgatgttgaaactggaggtcgaggacggggaagaggtggtccc
cgtggtcgtggccgaggtggaggcagaggaagtgaccgctacagtaacgaccgttcagga
actgcaccttggtctcggcaaggtaccccagactgggatgagggtgatgcctctttgcct
cctagaacagcacgacgtcataatgatgaacgacgacgtgtagcagacgaagaagaaact
gtactagatgctgctgaaactggaagtgtaggcagtcttgatcgagagtctgtaactagt
gagggcaaaaggcgtcggcgtcgacaccgaaagttccgtcgtcgaggaggtggaggtgga
ggtgagggtggtgatggaacctcagctgatgaaggttggagcacttctgccaatgagagt
tggggaggtgatgaaggctgggctgcctcaacaggagaaaactgggagcctcaaccttca
gggcgtaacaatgtagaacgcaatgctggaggggatcaaggaggtcgtcgaggaggtggg
cggggtcaccctgaccgaccaccgagtagggaagggacacttccacgtagacgaccccca
cgacatgagggcactcctgctcgccagtctccagggcgccgccccccacagcagccccgt
aggtctcatcaaccagctgtgaatggcaactaa
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