Macrobrachium rosenbergii (giant freshwater prawn): 136843762
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Entry
136843762 CDS
T10429
Symbol
Chc
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj04142
Lysosome
mrj04144
Endocytosis
mrj05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
136843762 (Chc)
04142 Lysosome
136843762 (Chc)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
136843762 (Chc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mrj04131
]
136843762 (Chc)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mrj04147
]
136843762 (Chc)
Membrane trafficking [BR:
mrj04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
136843762 (Chc)
Exosome [BR:
mrj04147
]
Exosomal proteins
Proteins found in most exosomes
136843762 (Chc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
136843762
NCBI-ProteinID:
XP_066968529
LinkDB
All DBs
Position
12:complement(96127554..96201105)
Genome browser
AA seq
1675 aa
AA seq
DB search
MSQVLPIRFQEHLQLTNVGIQTSNIGFNTLTMESDKFICVREKVGESAQVVIIDMADPTN
PIRRPISGDSAIMNPASKVIALKAQKTLQIFNIEMKTKIKAHTMDTEIQFWKWITSNKLA
LVTETAVYHWSMDGDAQPQKMFDRHSSLNGCQIINYRTDTKQNWLLLIGISAQQNRVVGF
MQLYSMERKASQPIEGHAAGFTTFKMEGNPETSTLFCFAVRNAQGGKLHIIEVGAPAAGN
QPFAKKNVDVFFPPEAQNDFPVAMQVSSKHDVIYLITKYGYVHLYDIESGTCIFMNRISG
DTIFVTAPHESSSGIIGVNRKGQVLSVSVDEENIIPYITNVLQNPDLALRIATRNNLAGA
EDLFVRKFNTLFQNGQYSEAAKVAANAPKGVLRTPQTIQRFQQVTAQQGQTSPLLQYFGI
LLDQSHLNKFESLELCRPVLAQGRKNLLEKWLKEDKLECSEELGDLVKQADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDYIFLLRNVMRVNPEQGLAFAQMLVQDD
EPMADVNQIVDIFLESNLIQQCTAFLLDALKNNRPTEGPLQTRLLEMNLMSAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDMYDIKRAVVHTQLLNPEWLVNYFGSLSV
EDSLECLKAMLTANLRQNLQIVVQIATKYHEQLTTNALIDLFESFKSFEGLFYFLGSIVN
FSQEPEVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCAEDVIKQLIMVVRGQF
STDELVEEVEKRNRLKLLLSWLESRIHEGVSEPATHNAIAKIYIDSNNNPERFLRENPHY
DSKVVGKYCEKRDPHLACIAYERGQCDRELINVCNENSLFKSEARYLVRRRDPELWAEVL
QETNQYRRQLIDQVVQTALSETQDPEDISVTVKAFMTADLPNELIELLEKIVLDNSAFSD
HRNLQNLLILTAIKADHTRVMDYITRLDNYDAPDIANIAIGNQLYEEAFAIFKKFDVNTS
AIQVLIEHITNLDRAYEFAERCNESAVWSQLAKAQLQQSLVKEAIDSFIKADDPTAYIDV
VDTAHRTGHWEDLVRYLVMARKKARESYVESELCYAYAKTNRLADLEEFIAAPNHADIQK
IGDRCFDDGMYDAAKLLYNNVSNFARLAITLVHLKEFQGAVESARKANSTRTWKEVCFAC
VDNEQFRLAQNCGLHIVVHADELEDLINYYQDRGYFDELINLLEAALGLERAHMGMFTEL
AILYSKYKPEKMREHLELFWSRVNIPKVLRAAEHAHLWAELVFLYDKYEEYDNAVLTMMA
HPTEAWRESHFKDVITRVANIELYYKAIQFYLDYKPMLLNDLLMVLSPRMDHTRAVNFFS
KVDHLKLVKGYLRSVQSLNNKAINEALNSLLIEEEDYTGLRTSIDAFDHFDNIALAQSLE
KHDLIEFRRIAAYLYKGNNRWKQSVELCKKDKLFKDAMEYAAESKNSDTAEELISWFLEN
GNFDCFAACLFHCYDLLHPDVILELSWRHNIMDFAMPYLINVMREYVTKVNKLEEVERNR
SENETHESKPMNMIGEPQLMITAGPGMMGPGYPNAGYANNINYGAGMPSYQGYSM
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagtattaccaatacggttccaggagcatttgcagctcacaaatgttgggatc
cagacttcaaacattgggtttaatacccttaccatggaaagtgacaagttcatttgtgtc
agggagaaggtcggggagtcagcccaggtggtcatcatcgatatggctgatccaacaaat
cctatcaggcgacccatctctggtgactctgccatcatgaatccagcatctaaagttata
gctctgaaagctcaaaaaactttgcaaattttcaacattgaaatgaagaccaaaattaaa
gcacatacaatggatacggaaattcagttctggaagtggatcaccagtaacaagttagct
ctggtcacagaaactgctgtctaccattggagtatggatggtgatgctcagccacagaag
atgtttgaccgtcacagtagtttgaatggttgtcaaatcattaactacaggacagatacc
aaacagaactggctgttactgattggtatttcagctcaacagaacagagttgtaggcttc
atgcaactttatagcatggagcgcaaagcaagtcagccaattgaaggtcatgcagctggc
tttactactttcaagatggagggtaacccagagacttcaacactgttctgctttgcagta
cgcaatgctcagggaggcaagttacatattattgaagttggtgcacctgcagctggtaac
cagccatttgcaaagaagaatgttgatgttttcttcccacctgaagcacagaatgacttt
cctgttgctatgcaggtcagttcaaaacatgatgtgatataccttatcactaagtatggc
tatgttcacctatatgacattgagagtggtacatgcatctttatgaaccgtatcagtggt
gacactatatttgtcactgcaccccacgagtcatctagtggcatcatcggtgttaatcgt
aaaggacaggtgctaagtgttagtgtggatgaagaaaacatcattccatacatcacaaac
gtcctacaaaatcctgatttagccttaagaattgccaccagaaataatcttgcaggagct
gaggatctttttgtgcgcaagttcaacacattattccagaatggtcagtacagtgaagca
gccaaggttgcagctaatgctccaaaaggtgtcctgcgtaccccacagacaattcaaagg
ttccagcaggtcactgctcagcaaggtcaaacatcccctctcctccagtatttcggaatt
ctgttggatcagtcccatctgaataagtttgaatccttagagttatgtagacctgtgctg
gcacagggtcgtaaaaatctgctcgagaagtggttaaaggaagataaattggagtgttca
gaggagcttggagatttagtgaaacaagctgacccaactctagccctctcagtttacttg
agagccaatgtaccaaataaagtgattcagtgttttgctgagactggtcagttccagaaa
atagttttgtatgccaagaaagtaggttacacaccagattacattttccttttgcgaaat
gtcatgcgtgtaaatccagagcaaggtctggcatttgcacagatgctggtacaggatgat
gaaccaatggctgatgtaaatcagatagtggacatatttttagaaagtaatttgattcaa
caatgtacagcctttctgttagatgccctcaaaaataaccgccccaccgaaggacctttg
caaacccgcctgctggaaatgaaccttatgtctgccccacaagtagctgatgctatcttg
ggtaatcagatgttcactcattatgatcgtgcacacattgctcagctctgtgagaaggca
ggattgttgcagcgtgccttggaacattacactgacatgtatgatatcaagcgtgcagtt
gtacacacccagttactaaatccagagtggttagtcaactattttggatcattatctgtg
gaagactccttggagtgcctgaaagcaatgctcactgcaaacctcagacagaatcttcaa
attgttgttcagattgcaaccaagtaccatgagcagttgacaacgaatgctctgattgac
ctatttgagtcattcaagtcatttgaaggccttttctacttcttgggatctattgtcaac
ttttctcaagaacctgaagttcatttcaagtacattcaagctgcctgcaaaactgggcaa
ataaaggaggtagagagaatatgtcgagagtcaaattgctacaacccagaacgtgtgaaa
aacttcttgaaggaggctaaattgactgaccagttgcccctgattattgtttgtgatcgc
tttgattttgttcatgatttggttctctacctttacagaaataatcttcaaaaatacatt
gaaatttatgtacaaaaggtcaatccatcacgtttacctgttgtggttggaggcctcttg
gatgttgattgtgctgaggatgtcattaagcaattgatcatggttgtacgtggccaattc
tccactgatgagcttgtggaagaagtggaaaaacgtaataggttgaagttgttgctatca
tggttggagtcgcgtatccatgaaggagtgtcagaacctgccacacacaatgctattgcc
aaaatatacatcgactcgaataataatcctgagaggttcttgcgtgagaatccacattac
gatagcaaagtagttggcaagtactgcgaaaaaagggatccacacctagcttgtatcgct
tatgagagaggacagtgtgatcgagagctgataaatgtatgtaacgagaactctctcttt
aaatctgaagctcgttatttggtaaggaggcgagatcctgaactctgggctgaagtcctg
caggagacaaatcagtacaggcgacaattaattgatcaggttgtacaaactgccctgtca
gaaactcaggacccagaggacatttctgttactgttaaagccttcatgactgcagacctg
ccaaatgagctaatagagcttttagagaagattgttcttgataattctgctttcagtgac
cataggaaccttcagaacttgttgattttaactgcaataaaggctgatcacactagagtc
atggattacataacacggctagataactatgatgccccagatattgctaacattgctatt
gggaatcagttatatgaagaagcatttgcaatctttaagaagtttgatgttaacacatct
gcaattcaggtactaattgaacacataacaaacttggatcgtgcctatgaatttgctgag
cgttgcaatgagagtgctgtgtggagtcagttggcaaaggcacagcttcaacagtctctt
gtgaaggaggcaatagattctttcatcaaagcagacgatccaactgcctacattgatgtt
gtggatacagcacatagaacaggccactgggaagatttagttagatacctggtcatggct
cggaaaaaagcaagagagtcctacgttgaaagtgagctctgctatgcatatgcaaaaaca
aacaggttagctgacttggaagagttcattgcagctccaaatcatgcagatatacaaaag
attggtgaccgttgttttgatgatggcatgtacgatgcagccaaactcttgtacaataat
gttagtaactttgcaagattagccatcacactcgtccaccttaaagagttccagggtgct
gtagaatctgcccgtaaagctaacagtactagaacgtggaaggaggtttgctttgcttgt
gttgacaatgaacagttccgtcttgctcagaactgtggccttcacatagttgttcatgct
gatgaattagaagaccttattaattactatcaggatcgtgggtatttcgatgaacttatt
aatttactagaggctgccctaggactagagcgtgcacatatgggtatgtttacagaacta
gccatcctttattcaaagtacaagccagagaagatgagggagcatctcgagctcttctgg
tccagagttaacattccaaaggtattacgggcagcagagcatgcacatctatgggctgag
ttggtgttcttgtacgataaatatgaagagtatgataatgcagtcttaacgatgatggca
catccaacagaggcatggagggaatcacatttcaaagatgttatcaccagagttgccaat
atcgaattatactataaagccatccagttttatttggattacaagccgatgctcttgaat
gacctactgatggtcctatcaccaagaatggatcatactagagctgtcaatttcttctca
aaggttgatcacttgaaactggtcaaaggttacttaaggtcggtgcagtccttaaacaac
aaggctatcaatgaagctctgaattctttacttatagaagaggaagattatacaggcttg
agaacttcaattgatgcatttgaccatttcgacaacattgcacttgcacagtccttagag
aagcacgatttaattgaattccgccgcattgcagcatatttgtacaaaggcaacaataga
tggaagcagtcagtggaattatgcaagaaagataagctgtttaaggatgccatggaatat
gctgcagagagcaagaactctgatacagctgaagaactcatctcttggttcctggagaat
ggcaactttgactgctttgcagcatgtctcttccattgctatgatcttctgcatccagat
gttattttggagttgtcctggcgtcataacattatggactttgctatgccatatttaatt
aatgtgatgagggagtatgtcacaaaggttaataaattagaagaagtcgaaagaaataga
agtgaaaatgaaactcatgaaagcaaacctatgaatatgattggtgagccccagcttatg
atcacagctggcccgggcatgatgggaccaggctaccccaacgctggatacgctaacaat
attaactacggtgctggcatgccctcgtaccaaggctacagcatgtaa
DBGET
integrated database retrieval system
