Macrobrachium rosenbergii (giant freshwater prawn): 136843978
Help
Entry
136843978 CDS
T10429
Symbol
Vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mrj04131
]
136843978 (Vps50)
Membrane trafficking [BR:
mrj04131
]
Protein recycling
Others
EARP complex
136843978 (Vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Baculo_PEP_C
Utp13
Motif
Other DBs
NCBI-GeneID:
136843978
NCBI-ProteinID:
XP_066969096
LinkDB
All DBs
Position
12:26064348..26150272
Genome browser
AA seq
900 aa
AA seq
DB search
MDIKGKFKSFIDKQKISLKAPTSPVQNADFVTLDDFEGRTAVTPQVFRKGSALNEHMLTP
EAEQAVIDSIEKIYFESENVEVSEHELQKFPEVIDIHFINGTRSRLRKQQAIVSRRVSDL
IMQKQGMCSEEMERVTELQKEIIKEVGLCVEGRKKLALGRSQFTSASLGILANYSKRQKI
ASVIRSLRMIRTLQMTDVQLQSLLKAEDYPGAIQLLLECQKAAATFKHFTCISELSTKLQ
DTLEGAEEQLDVALAKVASNFNSGNYEKLQTAYGLLGKTQTLMDQLHMHLTSHIHNSAFT
IVLGYVELYNTANGGNGSVGGSSYSKLQYSELCKNVNEESFLPCLLDLSRCMWNVLRSYK
SIIAWHESDKRSVPRADTPEHCNDSEMENHCRYTKQKLEHGLYRIWQDVQAKVRTFILAS
DLSHFKFDDFLRILDVINKLIDVGESFCGSRSETLRESIKKQSLNYFRNHHRARMEELHM
FLENEGWEPCPVKSTFSIYQLMEFRFLRGRDGVFNKIATPNSSPIKRLGKCAQTVLMFGS
PLVNQKRKIDHSKVPIVTNTALTILRLIGKYIQMMRLLQPIAFDVMISLSHLFDYYLYSV
FTFFGPSGVQEQELGHLRSPLKRIQDTLIINVEDSPDEPQDHEKVQSPSLSPVVDTTSAE
SIYGLPVRVVAVESLIFLAHQLEALLPHIEPLIPQQRRTFWHRHFNTCRYLASIRYHVYS
TVAAQVIDYDAIQNRMTSVRWDINDLMSQHSQYVDVLLRQLQVLSMRLEEVSRVSPIPSE
AYKALWECIVKKTNQMLLEGFAGARRCTNEGRSLMQLDYQQFLMKLECLTSVRPLPDRHV
VETYIKAYYLPEGALEDWIQQNLSDYTPRQLTALVATMTHISKRTRQKVGALIEDGGKKL
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaaaggaaagttcaagtcgttcattgataagcaaaagatatccctcaaagca
ccgacttcaccagtgcaaaatgcagactttgtcactctggatgactttgagggtagaacc
gccgtgaccccacaggtgttcaggaaagggagtgccctcaatgaacacatgttaacaccg
gaggccgaacaggccgtcatcgatagcatagaaaagatttatttcgagagtgaaaatgtt
gaagtgagtgagcacgagctgcaaaagttcccggaagttattgacatccacttcatcaac
ggcaccaggtctaggctacggaagcagcaggccatagtgtcgaggcgagtgtcagattta
attatgcagaaacagggaatgtgcagtgaagaaatggagcgcgtgacggagctgcaaaag
gaaattattaaggaggtgggactttgtgtcgaaggtcgtaagaaactcgccctagggaga
agtcagtttacgtcggcgagtttaggcattttagccaattatagcaagaggcaaaagatt
gctagtgttataaggtcattaaggatgattagaactttacagatgactgatgttcagttg
caaagtttgctgaaagcagaggattatccaggggccatacagttgttattggagtgtcag
aaagcagcagcaacattcaaacatttcacatgtatatcagagctaagcaccaaattacaa
gatacattagaaggcgctgaagaacagttagatgtggcactggcgaaagttgcttcaaac
tttaattctggcaattatgaaaagctacaaacggcatatggattactggggaaaactcaa
accttgatggatcagcttcatatgcatttaacttctcatattcacaattctgcatttaca
atagttcttggttatgttgaattgtataatacagcaaatggaggaaatggttctgtaggg
ggttcatcttattcaaagctacagtattctgaattgtgtaagaatgtcaatgaggaaagt
tttctcccttgccttttggacctaagtagatgtatgtggaatgttttaaggagttacaaa
agcataattgcgtggcatgagagtgacaaaaggagtgtccctagggctgatacaccagaa
cactgtaatgatagtgaaatggaaaatcattgcagatatactaaacaaaaattggaacat
ggtctttacagaatatggcaggatgtacaggcaaaagtgagaacttttattttagcatct
gatctgtcacatttcaaatttgatgattttctaagaattttagatgtgattaacaaatta
atcgatgtgggggaatctttttgtggtagtcggtcagaaactttacgagagtccataaag
aaacagtccttaaattatttccgtaatcatcaccgtgcaaggatggaagagcttcatatg
tttttggaaaatgagggttgggagccttgcccagtgaagtcaacattctccatctatcaa
cttatggaattcagatttctcaggggtagggatggagtcttcaacaaaattgcaactcct
aactcctcacccattaaaagacttggtaagtgtgcacaaactgttttgatgtttggtagc
cccctagtaaatcaaaaacgaaagattgatcacagcaaggttcctattgtgacaaacaca
gcgttaactattctgaggctaattggtaaatatattcagatgatgagactgctgcagcca
atagcatttgacgtgatgatatcgctcagccatttgtttgactattatttatatagtgtc
ttcactttttttgggccaagtggagtgcaagagcaggagcttggccatctccggtccccg
cttaaaagaattcaggatacactgattattaatgtagaggacagccctgacgaacctcag
gatcatgagaaggttcagagtccatctttgtcccctgtggtggatacgacatctgctgaa
agcatctatggcttacccgttcgagttgttgctgttgagagtttaatattcttggctcat
cagcttgaagcattgttacctcatattgagcccctcataccacaacaacgaagaaccttc
tggcatcgtcactttaatacctgtcgttatctagcgagtatacgttatcatgtgtattca
acagttgcagctcaggtaatagactatgatgccattcagaatcgtatgactagtgtcaga
tgggacatcaatgacctcatgagtcagcatagtcagtatgtggatgtactacttagacaa
cttcaggttttaagcatgagacttgaagaagtaagcagagtatcacctataccaagtgag
gcttataaggcactttgggaatgtattgttaagaaaacaaatcaaatgttgctagaagga
tttgctggggctcgcaggtgcactaatgaaggacgttctcttatgcagcttgattatcag
caatttctcatgaaacttgagtgcttgacgtctgttcgaccactaccagatcgccatgta
gtggagacctatattaaagcctattaccttcctgagggtgcactggaggattggatccaa
caaaacctatctgattatactcctcgtcagctaactgctcttgtagctaccatgacacac
atcagcaaacgaactagacagaaagttggtgccttaatagaagatgggggtaagaaattg
tga
DBGET
integrated database retrieval system
